Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11025 | Canola | nucleus | 95.16 | 94.54 |
| CDY34301 | Canola | nucleus | 69.87 | 70.43 |
| CDY03428 | Canola | nucleus | 69.8 | 70.41 |
| AT4G24680.1 | Thale cress | nucleus | 71.39 | 69.24 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 35.84 | 31.08 |
| KRH03258 | Soybean | mitochondrion, nucleus | 34.75 | 30.64 |
| KRH57096 | Soybean | mitochondrion, nucleus | 34.54 | 30.37 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 32.01 | 28.86 |
| PGSC0003DMT400046782 | Potato | nucleus | 22.83 | 23.96 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 24.71 | 23.59 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 24.64 | 22.67 |
| TraesCS5D01G097200.2 | Wheat | nucleus | 24.49 | 22.33 |
| TraesCS5A01G084800.1 | Wheat | nucleus | 24.28 | 22.11 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 24.42 | 21.92 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 22.9 | 21.36 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 23.19 | 21.19 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 22.9 | 21.11 |
| Zm00001d041592_P002 | Maize | mitochondrion | 22.47 | 20.64 |
| Os11t0689500-01 | Rice | nucleus, plastid | 6.5 | 19.69 |
| TraesCS4A01G172700.2 | Wheat | cytosol | 14.23 | 16.65 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 2.75 | 14.62 |
| TraesCSU01G180900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 12.72 | 14.5 |
| Os11t0689650-00 | Rice | cytosol, mitochondrion, nucleus | 6.72 | 13.42 |
| TraesCSU01G189500.1 | Wheat | cytosol | 9.1 | 12.41 |
| TraesCSU01G181000.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 9.18 | 12.27 |
| OQU84043 | Sorghum | mitochondrion, nucleus | 13.87 | 12.05 |
Protein Annotations
| EnsemblPlants:CDX92648 | EnsemblPlantsGene:GSBRNA2T00154459001 | InterPro:BAT2_N | InterPro:MOS1-like | ncoils:Coil | PANTHER:PTHR34805 |
| PFAM:PF07001 | ProteinID:CDX92648 | ProteinID:CDX92648.1 | SEG:seg | UniParc:UPI0004EEE88A | MapMan:35.1 |
Description
BnaC07g39060D
Coordinates
chrLK031873:+:172610..179160
Molecular Weight (calculated)
150540.0 Da
IEP (calculated)
9.741
GRAVY (calculated)
-1.161
Length
1384 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTFSTTGDRS RWGTTRRSGM TILGKVAVPK PINLPSQRLE NQGLDPNVEI VPKGTLSWGS KSPLNAWGTS SLSPRTESGP GSPSHLSNRP SSGGSVTRPS
0101: TADSDKAHDS SSTAWDANSR PSSASGVFPS NQASVALQRP HSADTRPGSS HLSRFAESVS ETSATWGQHG VAPTKKDGFS LTSGDFPSLG TEKESTEKSA
0201: MPQDAGPGTR PASSSGRSAE ERGVDQEANV RIGDDSAWRR DNQPYSENKS RYCREEGQLD SRGLQPYPNA NFPHQYDAWR GPPVNNHQGG GWYRGNQPYG
0301: APMGPGGFHV DPFPFYPTQV PPVPGHEAGP RGNHAINEKM FRPPILDTYV HPRPGFYHGP VPREGYYGPP MGYGGPSNRD LPFAGRPAGP HAYHQHPGQG
0401: RYDTSASSVA LERNEPSHSQ ERQYKILLKP QDGRLKEDEA KREEFLGNRP STAEKVAPHM QTSKNNRRVN NNEKSGEVQP ITVENAARED PSLIQKIEGL
0501: NAKTTFNSET SANKVSARMP RSGHASDSQN SLPYKQVDPA TNKSVELAAI SGTTISRRST QQTQGGADHQ AKQRVNSGGN DGWRKTAVMS GSSAVTLAPN
0601: PERFAEINVG DSLDTDSIGK PGSGISVEPN DNQRTTMREL ARQRTQQRQK EEEERARDQR AKALAKLEEL NRRSQLAGES SVKNLEAAHN ASTPDMPEVP
0701: LSHSPASREK KTTVTAEDSI EVTEESGKTL LPSPEDANNE GSTQHDNPPR HHDGAASKQK RLGYKQKQNI VFEKKMAGSS FSEATTEVVD VVPPPEVSNE
0801: GVLGHNSVMP AASSVSTEST NTKRKNNRNG NKKKHRVEET TAMNPTRATV GKDSKSGDES TEIGRERAPE MEFGSLSVPS LDIKVSGNSS DQISSFTNEE
0901: SQSRVKHNWK SQHLRRNPRN SVANKPAEKF AGSSTVIWAP VHPQQKADIS TDADSQKTVP EFSTSSKSLH QVQTSSKSKR VEMERYVAKP IVKEMAEQSV
1001: SKNPITTAPE MTENVLQKEN CGGEGTGILQ PSVSAAGKSG SPSKSRHGNG RQGKHGRDHG SPHQRGSVAS TKALEDGQFR GTVNYHRNNQ TEQIAVGSSK
1101: DHTTCKSDGW NDGWYVPPET HSSAAEEVEA NGPGTVAVGK DQGMSIHGKQ HASRSYKDGG SNYSDLRKAN KRDPSKAHMQ QSGHGVGQQD LPVASKESRG
1201: PEDHVSHTAV NSNVNRGGNH GGREYTRDKT YVSQKRDVAG YGQKMTSADT PAQSQNRSTS KEVQGEHHPN SMFQKNTDHS QRFGRGHHDS QGGWGSSAQE
1301: NMHHHHHQRP ASNRDRQKQN LHYEYKPVGS HTHDGEQQFK DGSQAEGPPR YREKGQGQQR HGGHQQQRGS AGRNTGHGLT DERN
0101: TADSDKAHDS SSTAWDANSR PSSASGVFPS NQASVALQRP HSADTRPGSS HLSRFAESVS ETSATWGQHG VAPTKKDGFS LTSGDFPSLG TEKESTEKSA
0201: MPQDAGPGTR PASSSGRSAE ERGVDQEANV RIGDDSAWRR DNQPYSENKS RYCREEGQLD SRGLQPYPNA NFPHQYDAWR GPPVNNHQGG GWYRGNQPYG
0301: APMGPGGFHV DPFPFYPTQV PPVPGHEAGP RGNHAINEKM FRPPILDTYV HPRPGFYHGP VPREGYYGPP MGYGGPSNRD LPFAGRPAGP HAYHQHPGQG
0401: RYDTSASSVA LERNEPSHSQ ERQYKILLKP QDGRLKEDEA KREEFLGNRP STAEKVAPHM QTSKNNRRVN NNEKSGEVQP ITVENAARED PSLIQKIEGL
0501: NAKTTFNSET SANKVSARMP RSGHASDSQN SLPYKQVDPA TNKSVELAAI SGTTISRRST QQTQGGADHQ AKQRVNSGGN DGWRKTAVMS GSSAVTLAPN
0601: PERFAEINVG DSLDTDSIGK PGSGISVEPN DNQRTTMREL ARQRTQQRQK EEEERARDQR AKALAKLEEL NRRSQLAGES SVKNLEAAHN ASTPDMPEVP
0701: LSHSPASREK KTTVTAEDSI EVTEESGKTL LPSPEDANNE GSTQHDNPPR HHDGAASKQK RLGYKQKQNI VFEKKMAGSS FSEATTEVVD VVPPPEVSNE
0801: GVLGHNSVMP AASSVSTEST NTKRKNNRNG NKKKHRVEET TAMNPTRATV GKDSKSGDES TEIGRERAPE MEFGSLSVPS LDIKVSGNSS DQISSFTNEE
0901: SQSRVKHNWK SQHLRRNPRN SVANKPAEKF AGSSTVIWAP VHPQQKADIS TDADSQKTVP EFSTSSKSLH QVQTSSKSKR VEMERYVAKP IVKEMAEQSV
1001: SKNPITTAPE MTENVLQKEN CGGEGTGILQ PSVSAAGKSG SPSKSRHGNG RQGKHGRDHG SPHQRGSVAS TKALEDGQFR GTVNYHRNNQ TEQIAVGSSK
1101: DHTTCKSDGW NDGWYVPPET HSSAAEEVEA NGPGTVAVGK DQGMSIHGKQ HASRSYKDGG SNYSDLRKAN KRDPSKAHMQ QSGHGVGQQD LPVASKESRG
1201: PEDHVSHTAV NSNVNRGGNH GGREYTRDKT YVSQKRDVAG YGQKMTSADT PAQSQNRSTS KEVQGEHHPN SMFQKNTDHS QRFGRGHHDS QGGWGSSAQE
1301: NMHHHHHQRP ASNRDRQKQN LHYEYKPVGS HTHDGEQQFK DGSQAEGPPR YREKGQGQQR HGGHQQQRGS AGRNTGHGLT DERN
0001: MTSSTTGDRS RWGTTRRSGM TILGKVAVPK PINLPSQRLE NQGLDPNVEI VPKGTLSWGS KSSLNAWGTS SLSPRTESGP GSPSHLSNRP SSGGSVTRPS
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ DAGPHARPPS SSGRSVEGQG VDCTEEANDR IGDANSWRRE NQPYSEDAPR HCREEGQLDS RGSQSYPNAN FPPRYDAWRG PPVNNHQGGG
0301: WYGGNHPYGA PMGPGGFHMD PFPFYPTQVP PAPGHGAGPR GNHANNERMF RPPMLDSYVH PRMQTRPGFY VGPAPHEGYY GPPMGYGSPS NRDLPFAGRP
0401: TGPHAYNNHS GQGGYDTPGS SVSLERNESS HSQETQRPYK VLLKHQDGRF GEDNAKREEF LGNRLPNAEK IAQQMQTSRN ERREIRNDAS GEVQPVKAEL
0501: AAPGDPSLIQ KIEGLNAKTR TNDGWQNSSS VVNRDEQESQ PRTLNSGNSA NKVSARNHRT GHASDSKNSS HYNQGDSATN KNAEPAAMGG TSIFRRPTQQ
0601: TQGRADPQTK RIVNSEGNDA WQKTTVMSGS SHTTLATNTE SFREVNVDDS LDTESIRRPG SGISADPKDN QRSTMRELAR QRAQQRQKEE EERARDQRAK
0701: ALAKLEELNR RSQIYEEGSV KNMEAASNAS PADMPTDPGS HSSNATNSVE PTGGSGKNTT QNTRTSTEYA NNVGPSQQDN LPRDGGASKQ KRLGYKQKQN
0801: IIFEKKPTGS SVATAEVFDV VPSPEVVNEG VSSNNSDMPA TSTVSAESTF PKRKNNRNGK KKHKAEETAT MNTTRVAVGK ETKSGDESIE TARARAAEIE
0901: LGSVSVPSLD IKVSGDSSEQ ISSFTNEESQ NRAKNNWKSQ HVRRTQRNSL VNKPAEKFSG NNAVIWAPVH PQQKADVSTG GGSQTTVPEF GTSSKSQHQG
1001: QTSSKSKRVE IERYVPKPIV KEMAEQIVSK NLVTSAPDMS ENVNQKENRG GEGTGILQPS GSTAGKSGSP SKSRHGNGRQ GKHGREHASW HQRGSGAPTK
1101: ALEDGQFVTS NQPIRGTVNY HSSKQTEQIA AKDQTTCNKD GWNDGWYMTP ETHYSAAEEM ESSAVGKDQG MSMHGRQHAS RSNKDGGSNY GDPKKGNKRD
1201: FNKAHTQHSG HGFSQPDLPA ASKEGRVPGD HVWHTANRTG KYGGRESTRD KPYGSQEKNV VGYEHQGFTT EQKTTSADTQ AQLQNRSTNK EVQVEQNPNS
1301: MFQKNTGQGR RFGRGQESQG GWGLPAQENM HHHHQRPPSN RDRQKQNLHY EYKPVGSHTY DGERSREQSK ESSQTEGPRY REKGQGQQRQ GGYQQQRGTS
1401: GRNGGHGFTG DRN
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ DAGPHARPPS SSGRSVEGQG VDCTEEANDR IGDANSWRRE NQPYSEDAPR HCREEGQLDS RGSQSYPNAN FPPRYDAWRG PPVNNHQGGG
0301: WYGGNHPYGA PMGPGGFHMD PFPFYPTQVP PAPGHGAGPR GNHANNERMF RPPMLDSYVH PRMQTRPGFY VGPAPHEGYY GPPMGYGSPS NRDLPFAGRP
0401: TGPHAYNNHS GQGGYDTPGS SVSLERNESS HSQETQRPYK VLLKHQDGRF GEDNAKREEF LGNRLPNAEK IAQQMQTSRN ERREIRNDAS GEVQPVKAEL
0501: AAPGDPSLIQ KIEGLNAKTR TNDGWQNSSS VVNRDEQESQ PRTLNSGNSA NKVSARNHRT GHASDSKNSS HYNQGDSATN KNAEPAAMGG TSIFRRPTQQ
0601: TQGRADPQTK RIVNSEGNDA WQKTTVMSGS SHTTLATNTE SFREVNVDDS LDTESIRRPG SGISADPKDN QRSTMRELAR QRAQQRQKEE EERARDQRAK
0701: ALAKLEELNR RSQIYEEGSV KNMEAASNAS PADMPTDPGS HSSNATNSVE PTGGSGKNTT QNTRTSTEYA NNVGPSQQDN LPRDGGASKQ KRLGYKQKQN
0801: IIFEKKPTGS SVATAEVFDV VPSPEVVNEG VSSNNSDMPA TSTVSAESTF PKRKNNRNGK KKHKAEETAT MNTTRVAVGK ETKSGDESIE TARARAAEIE
0901: LGSVSVPSLD IKVSGDSSEQ ISSFTNEESQ NRAKNNWKSQ HVRRTQRNSL VNKPAEKFSG NNAVIWAPVH PQQKADVSTG GGSQTTVPEF GTSSKSQHQG
1001: QTSSKSKRVE IERYVPKPIV KEMAEQIVSK NLVTSAPDMS ENVNQKENRG GEGTGILQPS GSTAGKSGSP SKSRHGNGRQ GKHGREHASW HQRGSGAPTK
1101: ALEDGQFVTS NQPIRGTVNY HSSKQTEQIA AKDQTTCNKD GWNDGWYMTP ETHYSAAEEM ESSAVGKDQG MSMHGRQHAS RSNKDGGSNY GDPKKGNKRD
1201: FNKAHTQHSG HGFSQPDLPA ASKEGRVPGD HVWHTANRTG KYGGRESTRD KPYGSQEKNV VGYEHQGFTT EQKTTSADTQ AQLQNRSTNK EVQVEQNPNS
1301: MFQKNTGQGR RFGRGQESQG GWGLPAQENM HHHHQRPPSN RDRQKQNLHY EYKPVGSHTY DGERSREQSK ESSQTEGPRY REKGQGQQRQ GGYQQQRGTS
1401: GRNGGHGFTG DRN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.