Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG23720 | Sorghum | mitochondrion, nucleus | 83.56 | 82.84 |
| Zm00001d041592_P002 | Maize | mitochondrion | 81.96 | 81.69 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 56.79 | 56.72 |
| TraesCS5D01G097200.2 | Wheat | nucleus | 56.46 | 55.86 |
| TraesCS5A01G084800.1 | Wheat | nucleus | 56.19 | 55.53 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 56.26 | 54.8 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 8.66 | 50.0 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 27.16 | 27.49 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 26.43 | 27.38 |
| KRH03258 | Soybean | mitochondrion, nucleus | 26.36 | 25.22 |
| KRH57096 | Soybean | mitochondrion, nucleus | 26.3 | 25.1 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 25.5 | 24.95 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 26.17 | 24.62 |
| CDY11025 | Canola | nucleus | 21.37 | 23.04 |
| CDX92648 | Canola | nucleus | 21.11 | 22.9 |
| Bra019213.1-P | Field mustard | nucleus | 21.17 | 22.81 |
| CDY34301 | Canola | nucleus | 20.51 | 22.43 |
| Bra013824.1-P | Field mustard | cytosol | 20.17 | 22.41 |
| CDY03428 | Canola | nucleus | 20.44 | 22.38 |
| AT4G24680.1 | Thale cress | nucleus | 21.24 | 22.35 |
| PGSC0003DMT400046782 | Potato | nucleus | 17.31 | 19.71 |
Protein Annotations
| EntrezGene:103639563 | MapMan:35.1 | UniProt:A0A1D6KDE7 | InterPro:BAT2_N | ncoils:Coil | InterPro:MOS1-like |
| ProteinID:ONM01252.1 | ProteinID:ONM01255.1 | ProteinID:ONM01259.1 | ProteinID:ONM01261.1 | ProteinID:ONM01262.1 | ProteinID:ONM01263.1 |
| ProteinID:ONM01264.1 | ProteinID:ONM01265.1 | ProteinID:ONM01267.1 | ProteinID:ONM01268.1 | ProteinID:ONM01269.1 | ProteinID:ONM01270.1 |
| ProteinID:ONM01271.1 | ProteinID:ONM01273.1 | ProteinID:ONM01276.1 | PFAM:PF07001 | PANTHER:PTHR34805 | UniParc:UPI000220E350 |
| EnsemblPlantsGene:Zm00001d030659 | EnsemblPlants:Zm00001d030659_P003 | EnsemblPlants:Zm00001d030659_T003 | SEG:seg | : | : |
Description
modifier of snc1
Coordinates
chr1:+:151464303..151472649
Molecular Weight (calculated)
162724.0 Da
IEP (calculated)
10.067
GRAVY (calculated)
-1.006
Length
1502 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASSLLTTDR RWGATPARKS GMTVLGKVPK PINLPSQRLE NNGLDPNLEL VPKGTHTWGS KAPSTTPNAW SSSSILSTKN DGSSSSSSHF NGRPSSGGGS
0101: RPSTAGSEPL GSPNAWGPNS RPSSASGTFP SSHLPMATNR PRSAETRPGS SQLSRFADNA SDNVKASIRT IDRPGSSSHG PGFTLSTGDF PTLGSEANSQ
0201: RGHSSKGRPI SSSGKEVSQG EQVKSLTTGN GELISQSNNQ PVDIMKTEQH AHTGGAPVLA TNVPNEGLQP RPYPPNFPMP HPQFDSWRAP PGHPPEGMWH
0301: RGLVPGGPYR PVGPPGSFPV EPFGYYGQFP PNSEVAARQG PGHGGYQAKN GDVYHPTPPN SYIMNQPVIP VRPVYQGPVP YDGYYGPRAH FNNANVRDPH
0401: FVGGPGILNQ FPNQNDRFHP GHPQNRPGRH ETVPREQLEY DKIHVFHRGN PGSLHDNSDR LGGSREFERN AQPASPLLPH PDGNRTDVNM RTDTRDTFSE
0501: SERTRVLTKS VPNQRGSVGT EHLSVYDNAH SHHRETGDGT LRKKFKEDGS AALHPVIKKN AALIEKIESL NNKARNVDAR NLPESASSKE FNKHKKSTDV
0601: SSNDVMGMAC KSDPAVSVSC VSPAVQRLPN VPIKGTILGP AHPQLTEFSK AEKLGDSISD HVHRKSDSSR NSYHGPSKDR PANKFGSHGR GESSTTDLRN
0701: NIDHGQQPEI ASQLQPAIVP DDMPASLDYE SQRAKMKELA AERAKKLKAE EEERIKNQKA KALAKLEELN RRSSVLQKKS NDIKVETYDA HDKQHAGLDV
0801: TAKLDTSTEP HDVIAPDRLT DLLPPNDPNH TMVHIQAQST AQSHALDGGK DPDAHATSSL VKNTHSNMEP VVQKSISQLH DITVVKAKQG YRKRHVSEEK
0901: ISDEKASASI TTRNITKNVD VLIDTVTAVV APHDDPPTQN KKGTRHLRSK KKLDDAPVTS KHPPVVLNEP NTVKVSTEPK THTGGVIISS SIVPTEGTIV
1001: TVGSITVGGI SLKPMNQERV KSPDGTNNTE SSQPRPQQTR KSGKHQHVLR PVEKPHGNDG ILCAPVKPPV PNEHSDGAMP TAAVADLTKP VGKAINDGEN
1101: VTRTKRAEME RYVPKPMSKE LQQQNPSDDK EAVDKPSGAK SHPAAEPKKT SKAHGGKSNP SWRKRNPDES ALVAPNSVEQ ADVSYESKEV QNFTYQKQPV
1201: ELGKQDTQLK FSVDAAAENS SAPVQTVPLS VGGAKQHSAA NRQRRQHVKA QRNEASGYSN ESKGSEGKND VVYQSATPVM DSNSSNHRNV PRSDVKNSGV
1301: VSHSRAWKPK TNSHPQDSSD GKIAVDGQVD SHGGRLEMNT SKGSDTITHL VTSSEPTKRS DGKEVSHSKH ENLAREDGNQ KGETEQEQAN PTLRRQGQPN
1401: ARYHRGGGSH RGRGGYDTGR PNHVTNVERR KGGSHLEYQP VGPQNKAADF QQSLGMEERT EGPPASGQAF RQRGHNRGLR PAGRFVQRNP ASTPTTNSHQ
1501: NE
0101: RPSTAGSEPL GSPNAWGPNS RPSSASGTFP SSHLPMATNR PRSAETRPGS SQLSRFADNA SDNVKASIRT IDRPGSSSHG PGFTLSTGDF PTLGSEANSQ
0201: RGHSSKGRPI SSSGKEVSQG EQVKSLTTGN GELISQSNNQ PVDIMKTEQH AHTGGAPVLA TNVPNEGLQP RPYPPNFPMP HPQFDSWRAP PGHPPEGMWH
0301: RGLVPGGPYR PVGPPGSFPV EPFGYYGQFP PNSEVAARQG PGHGGYQAKN GDVYHPTPPN SYIMNQPVIP VRPVYQGPVP YDGYYGPRAH FNNANVRDPH
0401: FVGGPGILNQ FPNQNDRFHP GHPQNRPGRH ETVPREQLEY DKIHVFHRGN PGSLHDNSDR LGGSREFERN AQPASPLLPH PDGNRTDVNM RTDTRDTFSE
0501: SERTRVLTKS VPNQRGSVGT EHLSVYDNAH SHHRETGDGT LRKKFKEDGS AALHPVIKKN AALIEKIESL NNKARNVDAR NLPESASSKE FNKHKKSTDV
0601: SSNDVMGMAC KSDPAVSVSC VSPAVQRLPN VPIKGTILGP AHPQLTEFSK AEKLGDSISD HVHRKSDSSR NSYHGPSKDR PANKFGSHGR GESSTTDLRN
0701: NIDHGQQPEI ASQLQPAIVP DDMPASLDYE SQRAKMKELA AERAKKLKAE EEERIKNQKA KALAKLEELN RRSSVLQKKS NDIKVETYDA HDKQHAGLDV
0801: TAKLDTSTEP HDVIAPDRLT DLLPPNDPNH TMVHIQAQST AQSHALDGGK DPDAHATSSL VKNTHSNMEP VVQKSISQLH DITVVKAKQG YRKRHVSEEK
0901: ISDEKASASI TTRNITKNVD VLIDTVTAVV APHDDPPTQN KKGTRHLRSK KKLDDAPVTS KHPPVVLNEP NTVKVSTEPK THTGGVIISS SIVPTEGTIV
1001: TVGSITVGGI SLKPMNQERV KSPDGTNNTE SSQPRPQQTR KSGKHQHVLR PVEKPHGNDG ILCAPVKPPV PNEHSDGAMP TAAVADLTKP VGKAINDGEN
1101: VTRTKRAEME RYVPKPMSKE LQQQNPSDDK EAVDKPSGAK SHPAAEPKKT SKAHGGKSNP SWRKRNPDES ALVAPNSVEQ ADVSYESKEV QNFTYQKQPV
1201: ELGKQDTQLK FSVDAAAENS SAPVQTVPLS VGGAKQHSAA NRQRRQHVKA QRNEASGYSN ESKGSEGKND VVYQSATPVM DSNSSNHRNV PRSDVKNSGV
1301: VSHSRAWKPK TNSHPQDSSD GKIAVDGQVD SHGGRLEMNT SKGSDTITHL VTSSEPTKRS DGKEVSHSKH ENLAREDGNQ KGETEQEQAN PTLRRQGQPN
1401: ARYHRGGGSH RGRGGYDTGR PNHVTNVERR KGGSHLEYQP VGPQNKAADF QQSLGMEERT EGPPASGQAF RQRGHNRGLR PAGRFVQRNP ASTPTTNSHQ
1501: NE
0001: MTSSTTGDRS RWGTTRRSGM TILGKVAVPK PINLPSQRLE NQGLDPNVEI VPKGTLSWGS KSSLNAWGTS SLSPRTESGP GSPSHLSNRP SSGGSVTRPS
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ GDTLDMALRN YKFADAGPHA RPPSSSGRSV EGQGVDCTEE ANDRIGDANS WRRENQPYSE DAPRHCREEG QLDSRGSQSY PNANFPPRYD
0301: AWRGPPVNNH QGGGWYGGNH PYGAPMGPGG FHMDPFPFYP TQVPPAPGHG AGPRGNHANN ERMFRPPMLD SYVHPRMQTR PGFYVGPAPH EGYYGPPMGY
0401: GSPSNRDLPF AGRPTGPHAY NNHSGQGGYD TPGSSVSLER NESSHSQETQ RPYKVLLKHQ DGRFGEDNAK REEFLGNRLP NAEKIAQQMQ TSRNERREIR
0501: NDASGEVQPV KAELAAPGDP SLIQKIEGLN AKTRTNDGWQ NSSSVVNRDE QESQPRTLNS GNSANKVSAR NHRTGHASDS KNSSHYNQGD SATNKNAEPA
0601: AMGGTSIFRR PTQQTQGRAD PQTKRIVNSE GNDAWQKTTV MSGSSHTTLA TNTESFREVN VDDSLDTESI RRPGSGISAD PKDNQRSTMR ELARQRAQQR
0701: QKEEEERARD QRAKALAKLE ELNRRSQIYE EGSVKNMEAA SNASPADMPT DPGSHSSNAT NSVEPTGGSG KNTTQNTRTS TEYANNVGPS QQDNLPRDGG
0801: ASKQKRLGYK QKQNIIFEKK PTGSSVATAE VFDVVPSPEV VNEGVSSNNS DMPATSTVSA ESTFPKRKNN RNGKKKHKAE ETATMNTTRV AVGKETKSGD
0901: ESIETARARA AEIELGSVSV PSLDIKVSGD SSEQISSFTN EESQNRAKNN WKSQHVRRTQ RNSLVNKPAE KFSGNNAVIW APVHPQQKAD VSTGGGSQTT
1001: VPEFGTSSKS QHQGQTSSKS KRVEIERYVP KPIVKEMAEQ IVSKNLVTSA PDMSENVNQK ENRGGEGTGI LQPSGSTAGK SGSPSKSRHG NGRQGKHGRE
1101: HASWHQRGSG APTKALEDGQ FVTSNQPIRG TVNYHSSKQT EQIAAKDQTT CNKDGWNDGW YMTPETHYSA AEEMESSAVG KDQGMSMHGR QHASRSNKDG
1201: GSNYGDPKKG NKRDFNKAHT QHSGHGFSQP DLPAASKEGR VPGDHVWHTA NRTGKYGGRE STRDKPYGSQ EKNVVGYEHQ GFTTEQKTTS ADTQAQLQNR
1301: STNKEVQVEQ NPNSMFQKNT GQGRRFGRGQ ESQGGWGLPA QENMHHHHQR PPSNRDRQKQ NLHYEYKPVG SHTYDGERSR EQSKESSQTE GPRYREKGQG
1401: QQRQGGYQQQ RGTSGRNGGH GFTGDRN
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ GDTLDMALRN YKFADAGPHA RPPSSSGRSV EGQGVDCTEE ANDRIGDANS WRRENQPYSE DAPRHCREEG QLDSRGSQSY PNANFPPRYD
0301: AWRGPPVNNH QGGGWYGGNH PYGAPMGPGG FHMDPFPFYP TQVPPAPGHG AGPRGNHANN ERMFRPPMLD SYVHPRMQTR PGFYVGPAPH EGYYGPPMGY
0401: GSPSNRDLPF AGRPTGPHAY NNHSGQGGYD TPGSSVSLER NESSHSQETQ RPYKVLLKHQ DGRFGEDNAK REEFLGNRLP NAEKIAQQMQ TSRNERREIR
0501: NDASGEVQPV KAELAAPGDP SLIQKIEGLN AKTRTNDGWQ NSSSVVNRDE QESQPRTLNS GNSANKVSAR NHRTGHASDS KNSSHYNQGD SATNKNAEPA
0601: AMGGTSIFRR PTQQTQGRAD PQTKRIVNSE GNDAWQKTTV MSGSSHTTLA TNTESFREVN VDDSLDTESI RRPGSGISAD PKDNQRSTMR ELARQRAQQR
0701: QKEEEERARD QRAKALAKLE ELNRRSQIYE EGSVKNMEAA SNASPADMPT DPGSHSSNAT NSVEPTGGSG KNTTQNTRTS TEYANNVGPS QQDNLPRDGG
0801: ASKQKRLGYK QKQNIIFEKK PTGSSVATAE VFDVVPSPEV VNEGVSSNNS DMPATSTVSA ESTFPKRKNN RNGKKKHKAE ETATMNTTRV AVGKETKSGD
0901: ESIETARARA AEIELGSVSV PSLDIKVSGD SSEQISSFTN EESQNRAKNN WKSQHVRRTQ RNSLVNKPAE KFSGNNAVIW APVHPQQKAD VSTGGGSQTT
1001: VPEFGTSSKS QHQGQTSSKS KRVEIERYVP KPIVKEMAEQ IVSKNLVTSA PDMSENVNQK ENRGGEGTGI LQPSGSTAGK SGSPSKSRHG NGRQGKHGRE
1101: HASWHQRGSG APTKALEDGQ FVTSNQPIRG TVNYHSSKQT EQIAAKDQTT CNKDGWNDGW YMTPETHYSA AEEMESSAVG KDQGMSMHGR QHASRSNKDG
1201: GSNYGDPKKG NKRDFNKAHT QHSGHGFSQP DLPAASKEGR VPGDHVWHTA NRTGKYGGRE STRDKPYGSQ EKNVVGYEHQ GFTTEQKTTS ADTQAQLQNR
1301: STNKEVQVEQ NPNSMFQKNT GQGRRFGRGQ ESQGGWGLPA QENMHHHHQR PPSNRDRQKQ NLHYEYKPVG SHTYDGERSR EQSKESSQTE GPRYREKGQG
1401: QQRQGGYQQQ RGTSGRNGGH GFTGDRN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.