Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G097200.2 | Wheat | nucleus | 97.63 | 97.76 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 93.49 | 94.48 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 90.13 | 88.85 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 58.95 | 59.14 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 9.8 | 57.31 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 55.53 | 56.19 |
| Zm00001d041592_P002 | Maize | mitochondrion | 54.47 | 54.94 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 27.5 | 28.83 |
| TraesCS4A01G172700.2 | Wheat | cytosol | 21.84 | 28.06 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 26.97 | 27.63 |
| KRH03258 | Soybean | mitochondrion, nucleus | 26.32 | 25.48 |
| KRH57096 | Soybean | mitochondrion, nucleus | 25.86 | 24.97 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 25.99 | 24.75 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 24.8 | 24.56 |
| CDX92648 | Canola | nucleus | 22.11 | 24.28 |
| Bra013824.1-P | Field mustard | cytosol | 21.51 | 24.19 |
| CDY34301 | Canola | nucleus | 21.58 | 23.89 |
| CDY11025 | Canola | nucleus | 21.84 | 23.83 |
| AT4G24680.1 | Thale cress | nucleus | 22.37 | 23.83 |
| CDY03428 | Canola | nucleus | 21.45 | 23.76 |
| Bra019213.1-P | Field mustard | nucleus | 21.78 | 23.74 |
| PGSC0003DMT400046782 | Potato | nucleus | 17.11 | 19.71 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G084800.1 | EnsemblPlantsGene:TraesCS5A01G084800 | InterPro:MOS1-like | ncoils:Coil | PANTHER:PTHR34805 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:110662579..110669761
Molecular Weight (calculated)
164825.0 Da
IEP (calculated)
10.003
GRAVY (calculated)
-1.093
Length
1520 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQVQAHITFH LGPSADRSAR AFFGPFSPSY LWAAPTRKSG MTVLGKIPKP INLPSQRLEN QGLDPKVEIV PKGTLTWGSK PGPTTPNAWN SSSLLSPKKD
0101: GNSGAPSQFN GRPSSGGGSR PSTAGSESLD SPNAWGPNSR PSSASGTLPS QNVPVVTNRP RSAETRPGSS QLSRFADNPS DNMNVSIRTV DRSGSSHGHA
0201: FTLSTGDFPT LGSEKISESN SQRGHSSKGR PTSSSGKDGT QNDTGKSLPA GSGEVVRPPN NQPADIMKTD QQAHDGSAPF PATGPPNDAQ QPQPYPPNYC
0301: MPPPQFDSWR APPGHPPEGM WHRGPGGPYR PVGPSSNFPV EPFPYYGQFP PNSEAAARQG SGHGGYHSKN ADAYHSMTPN SYVMNQPVIP VRPVYQGPIP
0401: YDGYYAPQRP NFNNANVRDS PFLGGPHQPG ILNQFPNQNE KFQPGHSPSR AVKHEASPKE LSESDRVQLI CRGQTRILHD NPDRLVGPGE VERKSQPAPP
0501: LLPHPDGNRN DVNTKADTRN TPSERNMVLM KSVHDNRGPN RTSHSSVLEN AHSHPRETDD GAHLKKLKED NLPLDQQPII KKNAALIEKI GSLNNKARNV
0601: DARNVAEAFS NKEIKEKQLK NADSKADRVI KDVPCTPAIT AFASASGQAG CVSPRSPVVQ KLQKGPNDGG VVGPLHSHFA EASKSGKLGV STHDRTHRRV
0701: DSSRNSHHGP AKDMLPNNTT GHGRGEIYAT ESLPVVQVRN SQHDQPLEHV SQLPLDDMPA SPDYESQRVK MRELAVQRAK QLQAEEEERT KRQKAKALAK
0801: LEELNKRSSV HQKDSSDPPP ENDNVRNEQK AGVDETTEPA SSTAESHDVT LLDNVSILQP PNEPKDTAVP AQPMSTLLHA EGTGKDASGH NTSTSGMNKQ
0901: SNMTEHIAHK SISLSHDVSV PKPRQGNRKR HAVSEDKIPG EKSSVTVNTE NVKKAVEVSL DTSTAVVTSH DDPPAHSKKS ARNSRNKKKI DDAPATSKYP
1001: PMVLGQQNTP SISSMPKIKT AGVIISSSIL PAENTVLTVG SITVGGISFG SFNQERLKLP EEAQSTANSR PKPQQSKGSK KIQHAIRPVE KPHGNESVVW
1101: APVKPSGWNE PSEEANAAVA ARPKPIGKGT TDGENVTRTK RAEMERYVPK PLSKELQQQN LEQNLPVEKS SVENKSNDNE KLTAAKEPKK WEDRKTSKGH
1201: GKSHSSWRRR NTDDSSSVVP VPSERADSYQ ESHEVQRLSD KHRQLEPDKQ ADYAAGNSLA PAEAVELPAS AAKEHAAANR QRRQHVKGPK NEASNYSNEN
1301: RDGRKDVNHM STRGMDANSS EHRNMSKPEV KSSAGHSRAH WKPKSSHSQN NSQGNNTTEG QVDSATLQDS SNRDSNQGKG DMTNVDENQK GESHENAEQQ
1401: QLNHATRRQG QHNGRYHRGS SAHRGRGYDA GQPSHGANAE RRRGSTHLEY QPVGSNKPSD FQQNPSADEQ SAGPPAPGPV YRERGHNRGH RPPGGHFVKR
1501: NPAPAPAPAP APAPNSYREE
0101: GNSGAPSQFN GRPSSGGGSR PSTAGSESLD SPNAWGPNSR PSSASGTLPS QNVPVVTNRP RSAETRPGSS QLSRFADNPS DNMNVSIRTV DRSGSSHGHA
0201: FTLSTGDFPT LGSEKISESN SQRGHSSKGR PTSSSGKDGT QNDTGKSLPA GSGEVVRPPN NQPADIMKTD QQAHDGSAPF PATGPPNDAQ QPQPYPPNYC
0301: MPPPQFDSWR APPGHPPEGM WHRGPGGPYR PVGPSSNFPV EPFPYYGQFP PNSEAAARQG SGHGGYHSKN ADAYHSMTPN SYVMNQPVIP VRPVYQGPIP
0401: YDGYYAPQRP NFNNANVRDS PFLGGPHQPG ILNQFPNQNE KFQPGHSPSR AVKHEASPKE LSESDRVQLI CRGQTRILHD NPDRLVGPGE VERKSQPAPP
0501: LLPHPDGNRN DVNTKADTRN TPSERNMVLM KSVHDNRGPN RTSHSSVLEN AHSHPRETDD GAHLKKLKED NLPLDQQPII KKNAALIEKI GSLNNKARNV
0601: DARNVAEAFS NKEIKEKQLK NADSKADRVI KDVPCTPAIT AFASASGQAG CVSPRSPVVQ KLQKGPNDGG VVGPLHSHFA EASKSGKLGV STHDRTHRRV
0701: DSSRNSHHGP AKDMLPNNTT GHGRGEIYAT ESLPVVQVRN SQHDQPLEHV SQLPLDDMPA SPDYESQRVK MRELAVQRAK QLQAEEEERT KRQKAKALAK
0801: LEELNKRSSV HQKDSSDPPP ENDNVRNEQK AGVDETTEPA SSTAESHDVT LLDNVSILQP PNEPKDTAVP AQPMSTLLHA EGTGKDASGH NTSTSGMNKQ
0901: SNMTEHIAHK SISLSHDVSV PKPRQGNRKR HAVSEDKIPG EKSSVTVNTE NVKKAVEVSL DTSTAVVTSH DDPPAHSKKS ARNSRNKKKI DDAPATSKYP
1001: PMVLGQQNTP SISSMPKIKT AGVIISSSIL PAENTVLTVG SITVGGISFG SFNQERLKLP EEAQSTANSR PKPQQSKGSK KIQHAIRPVE KPHGNESVVW
1101: APVKPSGWNE PSEEANAAVA ARPKPIGKGT TDGENVTRTK RAEMERYVPK PLSKELQQQN LEQNLPVEKS SVENKSNDNE KLTAAKEPKK WEDRKTSKGH
1201: GKSHSSWRRR NTDDSSSVVP VPSERADSYQ ESHEVQRLSD KHRQLEPDKQ ADYAAGNSLA PAEAVELPAS AAKEHAAANR QRRQHVKGPK NEASNYSNEN
1301: RDGRKDVNHM STRGMDANSS EHRNMSKPEV KSSAGHSRAH WKPKSSHSQN NSQGNNTTEG QVDSATLQDS SNRDSNQGKG DMTNVDENQK GESHENAEQQ
1401: QLNHATRRQG QHNGRYHRGS SAHRGRGYDA GQPSHGANAE RRRGSTHLEY QPVGSNKPSD FQQNPSADEQ SAGPPAPGPV YRERGHNRGH RPPGGHFVKR
1501: NPAPAPAPAP APAPNSYREE
0001: MTSSTTGDRS RWGTTRRSGM TILGKVAVPK PINLPSQRLE NQGLDPNVEI VPKGTLSWGS KSSLNAWGTS SLSPRTESGP GSPSHLSNRP SSGGSVTRPS
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ DAGPHARPPS SSGRSVEGQG VDCTEEANDR IGDANSWRRE NQPYSEDAPR HCREEGQLDS RGSQSYPNAN FPPRYDAWRG PPVNNHQGGG
0301: WYGGNHPYGA PMGPGGFHMD PFPFYPTQVP PAPGHGAGPR GNHANNERMF RPPMLDSYVH PRMQTRPGFY VGPAPHEGYY GPPMGYGSPS NRDLPFAGRP
0401: TGPHAYNNHS GQGGYDTPGS SVSLERNESS HSQETQRPYK VLLKHQDGRF GEDNAKREEF LGNRLPNAEK IAQQMQTSRN ERREIRNDAS GEVQPVKAEL
0501: AAPGDPSLIQ KIEGLNAKTR TNDGWQNSSS VVNRDEQESQ PRTLNSGNSA NKVSARNHRT GHASDSKNSS HYNQGDSATN KNAEPAAMGG TSIFRRPTQQ
0601: TQGRADPQTK RIVNSEGNDA WQKTTVMSGS SHTTLATNTE SFREVNVDDS LDTESIRRPG SGISADPKDN QRSTMRELAR QRAQQRQKEE EERARDQRAK
0701: ALAKLEELNR RSQIYEEGSV KNMEAASNAS PADMPTDPGS HSSNATNSVE PTGGSGKNTT QNTRTSTEYA NNVGPSQQDN LPRDGGASKQ KRLGYKQKQN
0801: IIFEKKPTGS SVATAEVFDV VPSPEVVNEG VSSNNSDMPA TSTVSAESTF PKRKNNRNGK KKHKAEETAT MNTTRVAVGK ETKSGDESIE TARARAAEIE
0901: LGSVSVPSLD IKVSGDSSEQ ISSFTNEESQ NRAKNNWKSQ HVRRTQRNSL VNKPAEKFSG NNAVIWAPVH PQQKADVSTG GGSQTTVPEF GTSSKSQHQG
1001: QTSSKSKRVE IERYVPKPIV KEMAEQIVSK NLVTSAPDMS ENVNQKENRG GEGTGILQPS GSTAGKSGSP SKSRHGNGRQ GKHGREHASW HQRGSGAPTK
1101: ALEDGQFVTS NQPIRGTVNY HSSKQTEQIA AKDQTTCNKD GWNDGWYMTP ETHYSAAEEM ESSAVGKDQG MSMHGRQHAS RSNKDGGSNY GDPKKGNKRD
1201: FNKAHTQHSG HGFSQPDLPA ASKEGRVPGD HVWHTANRTG KYGGRESTRD KPYGSQEKNV VGYEHQGFTT EQKTTSADTQ AQLQNRSTNK EVQVEQNPNS
1301: MFQKNTGQGR RFGRGQESQG GWGLPAQENM HHHHQRPPSN RDRQKQNLHY EYKPVGSHTY DGERSREQSK ESSQTEGPRY REKGQGQQRQ GGYQQQRGTS
1401: GRNGGHGFTG DRN
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ DAGPHARPPS SSGRSVEGQG VDCTEEANDR IGDANSWRRE NQPYSEDAPR HCREEGQLDS RGSQSYPNAN FPPRYDAWRG PPVNNHQGGG
0301: WYGGNHPYGA PMGPGGFHMD PFPFYPTQVP PAPGHGAGPR GNHANNERMF RPPMLDSYVH PRMQTRPGFY VGPAPHEGYY GPPMGYGSPS NRDLPFAGRP
0401: TGPHAYNNHS GQGGYDTPGS SVSLERNESS HSQETQRPYK VLLKHQDGRF GEDNAKREEF LGNRLPNAEK IAQQMQTSRN ERREIRNDAS GEVQPVKAEL
0501: AAPGDPSLIQ KIEGLNAKTR TNDGWQNSSS VVNRDEQESQ PRTLNSGNSA NKVSARNHRT GHASDSKNSS HYNQGDSATN KNAEPAAMGG TSIFRRPTQQ
0601: TQGRADPQTK RIVNSEGNDA WQKTTVMSGS SHTTLATNTE SFREVNVDDS LDTESIRRPG SGISADPKDN QRSTMRELAR QRAQQRQKEE EERARDQRAK
0701: ALAKLEELNR RSQIYEEGSV KNMEAASNAS PADMPTDPGS HSSNATNSVE PTGGSGKNTT QNTRTSTEYA NNVGPSQQDN LPRDGGASKQ KRLGYKQKQN
0801: IIFEKKPTGS SVATAEVFDV VPSPEVVNEG VSSNNSDMPA TSTVSAESTF PKRKNNRNGK KKHKAEETAT MNTTRVAVGK ETKSGDESIE TARARAAEIE
0901: LGSVSVPSLD IKVSGDSSEQ ISSFTNEESQ NRAKNNWKSQ HVRRTQRNSL VNKPAEKFSG NNAVIWAPVH PQQKADVSTG GGSQTTVPEF GTSSKSQHQG
1001: QTSSKSKRVE IERYVPKPIV KEMAEQIVSK NLVTSAPDMS ENVNQKENRG GEGTGILQPS GSTAGKSGSP SKSRHGNGRQ GKHGREHASW HQRGSGAPTK
1101: ALEDGQFVTS NQPIRGTVNY HSSKQTEQIA AKDQTTCNKD GWNDGWYMTP ETHYSAAEEM ESSAVGKDQG MSMHGRQHAS RSNKDGGSNY GDPKKGNKRD
1201: FNKAHTQHSG HGFSQPDLPA ASKEGRVPGD HVWHTANRTG KYGGRESTRD KPYGSQEKNV VGYEHQGFTT EQKTTSADTQ AQLQNRSTNK EVQVEQNPNS
1301: MFQKNTGQGR RFGRGQESQG GWGLPAQENM HHHHQRPPSN RDRQKQNLHY EYKPVGSHTY DGERSREQSK ESSQTEGPRY REKGQGQQRQ GGYQQQRGTS
1401: GRNGGHGFTG DRN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.