Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0026g02200.t01 | |
| VIT_12s0028g03730.t01 | |
| VIT_12s0028g03740.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24680.1 | VIT_01s0026g02200.t01 | AT1G69690.1 | 21798944 |
| AT4G24680.1 | VIT_12s0028g03730.t01 | AT4G28300.1 | 21798944 |
| AT4G24680.1 | VIT_12s0028g03740.t01 | AT4G28300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57096 | Soybean | mitochondrion, nucleus | 46.87 | 47.52 |
| KRH03258 | Soybean | mitochondrion, nucleus | 46.12 | 46.88 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 42.67 | 44.36 |
| PGSC0003DMT400046782 | Potato | nucleus | 33.08 | 40.03 |
| CDX92648 | Canola | nucleus | 31.08 | 35.84 |
| AT4G24680.1 | Thale cress | nucleus | 31.83 | 35.6 |
| Bra013824.1-P | Field mustard | cytosol | 30.08 | 35.5 |
| CDY03428 | Canola | nucleus | 30.33 | 35.28 |
| CDY34301 | Canola | nucleus | 30.08 | 34.96 |
| Bra019213.1-P | Field mustard | nucleus | 30.51 | 34.94 |
| CDY11025 | Canola | nucleus | 30.45 | 34.89 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 28.38 | 31.24 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 26.63 | 28.64 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 25.44 | 26.99 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 25.31 | 26.67 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 24.62 | 26.17 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 25.19 | 26.07 |
| TraesCS5D01G097200.2 | Wheat | nucleus | 24.75 | 26.02 |
| TraesCS5A01G084800.1 | Wheat | nucleus | 24.75 | 25.99 |
| Zm00001d041592_P002 | Maize | mitochondrion | 24.25 | 25.68 |
| Os11t0689500-01 | Rice | nucleus, plastid | 6.52 | 22.76 |
| TraesCS4A01G172700.2 | Wheat | cytosol | 14.47 | 19.53 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 3.13 | 19.23 |
| TraesCSU01G180900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 13.22 | 17.38 |
| TraesCSU01G189500.1 | Wheat | cytosol | 9.9 | 15.57 |
| TraesCSU01G181000.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 9.9 | 15.27 |
| Os11t0689650-00 | Rice | cytosol, mitochondrion, nucleus | 6.27 | 14.43 |
| OQU84043 | Sorghum | mitochondrion, nucleus | 13.22 | 13.25 |
Protein Annotations
| ArrayExpress:VIT_17s0000g08810 | EMBL:AM427528 | EMBL:FN594950 | EnsemblPlants:VIT_17s0000g08810.t01 | EnsemblPlantsGene:VIT_17s0000g08810 | InterPro:MOS1-like |
| ncoils:Coil | PANTHER:PTHR34805 | ProteinID:CAN62511 | ProteinID:CAN62511.1 | ProteinID:CCB42961 | ProteinID:CCB42961.1 |
| SEG:seg | unigene:Vvi.17621 | UniParc:UPI0002108333 | UniProt:F6GSL4 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr17:-:10202207..10220272
Molecular Weight (calculated)
172646.0 Da
IEP (calculated)
9.369
GRAVY (calculated)
-1.042
Length
1596 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTVLGKVAVP KPINLPSQRL ENHGLDPTVE IVPKGTLSWG NRSSASNAWG SSTISPSTDG GSGSPSHLSG RPSSGGSGTR PSTAGSDRAS ESTASAWGPS
0101: SRPSSASGPL TSNQSSLASL RPRSAETRPG SSQLSRFAEP LSENPVAWGA AGTAEKLGVA SSKSDGFSLT SGDFPTLGSE KDNFGKNTEL QEHGSHARPG
0201: SSSGKVAPVK ERTGTSPVGD VSVNDVKSGA VNTWKRDNST YVEDGPRPSV EKWRGESQPY LNASIPPQHF EPWHGTPSPG GVWFRGPPGP PYGAPVTPGG
0301: FPMEPFPYYR PQIPATALAN SQPVPPPGAG PRGHHPKNGD MYRPHMPDAY IRPGMPIRPG FYPGPVPYEG YYPPPMGYCN SNERDLPFMG MAAGPPVYER
0401: YSNQNARDSN NSHARTGGYG SSGKAMVPEQ AESGYHHDNR GPYKVLLKQH NDWDGKDEQK WDHTGTTNAS DLAKGDQRKT LPWDDDWEGD PKKVEELDSR
0501: RIKVVGEAAS QTFDNQMGSS APVKVKLTEC VSSAKPIDDS STKKFETAAS TFPEAPKPSP PAPKDSTLIQ KIEGLNAKAR ASDGRHDAPF VSSREKQKNG
0601: LQVDNTKTNQ STKEADSGAT YSERIHTNAI PASHEVGVST GLGSKDRSLE QVAASGTVIS RRATHGGQGR VDHRGKGRVN AQDVDGWRKK SLVADSSSVT
0701: GSGNVELSSN VDVQDCHSSM QVPQKSGLHL QGTEDGESGS MSDPSDSQAQ RAKMKEIAKQ RGRQLQKEEE ERLREQKAKA HAKLEELNRR TRTVDGSTQK
0801: LENVQSSGAF QHKQEELQIV AESNMDASKI GASSSALISG PSVTTQIHES NASRVGGSTD LSRELPIETP RSPYQEPIIS NNQSLPLQQN ANSIDAADNR
0901: NSPQINDASI SKQKRVGYKQ RQNIPKHNIP VEKNLTEKLV STVTIEVPKS LTDVVVSTAA SVEHVATEIV TSSESNLPVN ANVTTESGHQ RRKNNRIGRN
1001: KLKLEEASLP RETNPGKASV ENAEPKASVL ELDPSSIESI SNSKDAIQSF ENRGSLPNEE AHGRPTNQWK PQHPRRMPRN PQVNRSVEKF HNSDSVVWAP
1101: VQSQNKSEVA DEVSQKTVVE NTSSRGDHQV QNNLKNKRAE IQRYVPKPVA KELAQQGSIQ RPTSPSINQT TSDETIGRGE SGSQSTDSAQ LAGTAIEKSG
1201: FAVESRNGDT KPNRQAKSGS WRQRVPIEST HVQGLQEESS YNSSVEKNVQ KFIEHSETLK PDGQSAKGQS KYSDDWNTPD GWNTLESSDS AAPAPSAVVK
1301: DQGVTGRGKR HPFKGQKGTG NTHGLDHKNV SSGNTDKMCF QSSPLEMGQT DTTVALKENR GAGERSSSHW QPKSQAYPVH NQRGGRHNSS QNVNAEVART
1401: IRKESTPHGG AHFPPQHDKE TDHPHTDQPA SETGTVIEAP NAGHQETKRE EKNIASLKGR PHSPIQGPVN SVEPLPAGTD IRNEQRLSTG FRKNGNHSNR
1501: FSRGGHESHG DWSSGGQDNK QHNQPPNRER QRHNSHNEYQ PVRPFSNNRS NFEGASDGSH NTSLRFRERG HGHSRRGGGN FYSRQSGNVQ VDASYD
0101: SRPSSASGPL TSNQSSLASL RPRSAETRPG SSQLSRFAEP LSENPVAWGA AGTAEKLGVA SSKSDGFSLT SGDFPTLGSE KDNFGKNTEL QEHGSHARPG
0201: SSSGKVAPVK ERTGTSPVGD VSVNDVKSGA VNTWKRDNST YVEDGPRPSV EKWRGESQPY LNASIPPQHF EPWHGTPSPG GVWFRGPPGP PYGAPVTPGG
0301: FPMEPFPYYR PQIPATALAN SQPVPPPGAG PRGHHPKNGD MYRPHMPDAY IRPGMPIRPG FYPGPVPYEG YYPPPMGYCN SNERDLPFMG MAAGPPVYER
0401: YSNQNARDSN NSHARTGGYG SSGKAMVPEQ AESGYHHDNR GPYKVLLKQH NDWDGKDEQK WDHTGTTNAS DLAKGDQRKT LPWDDDWEGD PKKVEELDSR
0501: RIKVVGEAAS QTFDNQMGSS APVKVKLTEC VSSAKPIDDS STKKFETAAS TFPEAPKPSP PAPKDSTLIQ KIEGLNAKAR ASDGRHDAPF VSSREKQKNG
0601: LQVDNTKTNQ STKEADSGAT YSERIHTNAI PASHEVGVST GLGSKDRSLE QVAASGTVIS RRATHGGQGR VDHRGKGRVN AQDVDGWRKK SLVADSSSVT
0701: GSGNVELSSN VDVQDCHSSM QVPQKSGLHL QGTEDGESGS MSDPSDSQAQ RAKMKEIAKQ RGRQLQKEEE ERLREQKAKA HAKLEELNRR TRTVDGSTQK
0801: LENVQSSGAF QHKQEELQIV AESNMDASKI GASSSALISG PSVTTQIHES NASRVGGSTD LSRELPIETP RSPYQEPIIS NNQSLPLQQN ANSIDAADNR
0901: NSPQINDASI SKQKRVGYKQ RQNIPKHNIP VEKNLTEKLV STVTIEVPKS LTDVVVSTAA SVEHVATEIV TSSESNLPVN ANVTTESGHQ RRKNNRIGRN
1001: KLKLEEASLP RETNPGKASV ENAEPKASVL ELDPSSIESI SNSKDAIQSF ENRGSLPNEE AHGRPTNQWK PQHPRRMPRN PQVNRSVEKF HNSDSVVWAP
1101: VQSQNKSEVA DEVSQKTVVE NTSSRGDHQV QNNLKNKRAE IQRYVPKPVA KELAQQGSIQ RPTSPSINQT TSDETIGRGE SGSQSTDSAQ LAGTAIEKSG
1201: FAVESRNGDT KPNRQAKSGS WRQRVPIEST HVQGLQEESS YNSSVEKNVQ KFIEHSETLK PDGQSAKGQS KYSDDWNTPD GWNTLESSDS AAPAPSAVVK
1301: DQGVTGRGKR HPFKGQKGTG NTHGLDHKNV SSGNTDKMCF QSSPLEMGQT DTTVALKENR GAGERSSSHW QPKSQAYPVH NQRGGRHNSS QNVNAEVART
1401: IRKESTPHGG AHFPPQHDKE TDHPHTDQPA SETGTVIEAP NAGHQETKRE EKNIASLKGR PHSPIQGPVN SVEPLPAGTD IRNEQRLSTG FRKNGNHSNR
1501: FSRGGHESHG DWSSGGQDNK QHNQPPNRER QRHNSHNEYQ PVRPFSNNRS NFEGASDGSH NTSLRFRERG HGHSRRGGGN FYSRQSGNVQ VDASYD
0001: MTSSTTGDRR WGTTRRSGMT ILGKVAVPKP INLPSQRLEN QGLDPNVEIV PKGTLSWGSK SSLNAWGTSS LSPRTESGPG SPSHLSNRPS SGGSVTRPST
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQD AGPHARPPSS SGRSVEGQGV DCTEEANDRI GDANSWRREN QPYSEDAPRH CREEGQLDSR GSQSYPNANF PPRYDAWRGP PVNNHQGGGW
0301: YGGNHPYGAP MGPGGFHMDP FPFYPTQVPP APGHGAGPRG NHANNERMFR PPMLDSYVHP RMQTRPGFYV GPAPHEGYYG PPMGYGSPSN RDLPFAGRPT
0401: GPHAYNNHSG QGGYDTPGSS VSLERNESSH SQETQRPYKV LLKHQDGRFG EDNAKREEFL GNRLPNAEKI AQQMQTSRNE RREIRNDASG EVQPVKAELA
0501: APGDPSLIQK IEGLNAKTRT NDGWQNSSSV VNRDEQESQP RTLNSGNSAN KVSARNHRTG HASDSKNSSH YNQGDSATNK NAEPAAMGGT SIFRRPTQQT
0601: QGRADPQTKR IVNSEGNDAW QKTTVMSGSS HTTLATNTES FREVNVDDSL DTESIRRPGS GISADPKDNQ RSTMRELARQ RAQQRQKEEE ERARDQRAKA
0701: LAKLEELNRR SQIYEEGSVK NMEAASNASP ADMPTDPGSH SSNATNSVEP TGGSGKNTTQ NTRTSTEYAN NVGPSQQDNL PRDGGASKQK RLGYKQKQNI
0801: IFEKKPTGSS VATAEVFDVV PSPEVVNEGV SSNNSDMPAT STVSAESTFP KRKNNRNGKK KHKAEETATM NTTRVAVGKE TKSGDESIET ARARAAEIEL
0901: GSVSVPSLDI KVSGDSSEQI SSFTNEESQN RAKNNWKSQH VRRTQRNSLV NKPAEKFSGN NAVIWAPVHP QQKADVSTGG GSQTTVPEFG TSSKSQHQGQ
1001: TSSKSKRVEI ERYVPKPIVK EMAEQIVSKN LVTSAPDMSE NVNQKENRGG EGTGILQPSG STAGKSGSPS KSRHGNGRQG KHGREHASWH QRGSGAPTKA
1101: LEDGQFVTSN QPIRGTVNYH SSKQTEQIAA KDQTTCNKDG WNDGWYMTPE THYSAAEEME SSAVGKDQGM SMHGRQHASR SNKDGGSNYG DPKKGNKRDF
1201: NKAHTQHSGH GFSQPDLPAA SKEGRVPGDH VWHTANRTGK YGGRESTRDK PYGSQEKNVV GYEHQGFTTE QKTTSADTQA QLQNRSTNKE VQVEQNPNSM
1301: FQKNTGQGRR FGRGQESQGG WGLPAQENMH HHHQRPPSNR DRQKQNLHYE YKPVGSHTYD GERSREQSKE SSQTEGPRYR EKGQGQQRQG GYQQQRGTSG
1401: RNGGHGFTGD RN
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQD AGPHARPPSS SGRSVEGQGV DCTEEANDRI GDANSWRREN QPYSEDAPRH CREEGQLDSR GSQSYPNANF PPRYDAWRGP PVNNHQGGGW
0301: YGGNHPYGAP MGPGGFHMDP FPFYPTQVPP APGHGAGPRG NHANNERMFR PPMLDSYVHP RMQTRPGFYV GPAPHEGYYG PPMGYGSPSN RDLPFAGRPT
0401: GPHAYNNHSG QGGYDTPGSS VSLERNESSH SQETQRPYKV LLKHQDGRFG EDNAKREEFL GNRLPNAEKI AQQMQTSRNE RREIRNDASG EVQPVKAELA
0501: APGDPSLIQK IEGLNAKTRT NDGWQNSSSV VNRDEQESQP RTLNSGNSAN KVSARNHRTG HASDSKNSSH YNQGDSATNK NAEPAAMGGT SIFRRPTQQT
0601: QGRADPQTKR IVNSEGNDAW QKTTVMSGSS HTTLATNTES FREVNVDDSL DTESIRRPGS GISADPKDNQ RSTMRELARQ RAQQRQKEEE ERARDQRAKA
0701: LAKLEELNRR SQIYEEGSVK NMEAASNASP ADMPTDPGSH SSNATNSVEP TGGSGKNTTQ NTRTSTEYAN NVGPSQQDNL PRDGGASKQK RLGYKQKQNI
0801: IFEKKPTGSS VATAEVFDVV PSPEVVNEGV SSNNSDMPAT STVSAESTFP KRKNNRNGKK KHKAEETATM NTTRVAVGKE TKSGDESIET ARARAAEIEL
0901: GSVSVPSLDI KVSGDSSEQI SSFTNEESQN RAKNNWKSQH VRRTQRNSLV NKPAEKFSGN NAVIWAPVHP QQKADVSTGG GSQTTVPEFG TSSKSQHQGQ
1001: TSSKSKRVEI ERYVPKPIVK EMAEQIVSKN LVTSAPDMSE NVNQKENRGG EGTGILQPSG STAGKSGSPS KSRHGNGRQG KHGREHASWH QRGSGAPTKA
1101: LEDGQFVTSN QPIRGTVNYH SSKQTEQIAA KDQTTCNKDG WNDGWYMTPE THYSAAEEME SSAVGKDQGM SMHGRQHASR SNKDGGSNYG DPKKGNKRDF
1201: NKAHTQHSGH GFSQPDLPAA SKEGRVPGDH VWHTANRTGK YGGRESTRDK PYGSQEKNVV GYEHQGFTTE QKTTSADTQA QLQNRSTNKE VQVEQNPNSM
1301: FQKNTGQGRR FGRGQESQGG WGLPAQENMH HHHQRPPSNR DRQKQNLHYE YKPVGSHTYD GERSREQSKE SSQTEGPRYR EKGQGQQRQG GYQQQRGTSG
1401: RNGGHGFTGD RN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.