Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003986.1-P | |
| Bra004407.1-P | |
| Bra007875.1-P | |
| Bra010376.1-P | |
| Bra024211.1-P | |
| Bra026268.1-P |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34301 | Canola | nucleus | 97.71 | 96.21 |
| Bra019213.1-P | Field mustard | nucleus | 69.6 | 67.5 |
| AT4G24680.1 | Thale cress | nucleus | 69.38 | 65.73 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 35.5 | 30.08 |
| KRH03258 | Soybean | mitochondrion, nucleus | 33.43 | 28.79 |
| KRH57096 | Soybean | mitochondrion, nucleus | 33.51 | 28.78 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 30.99 | 27.3 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 24.7 | 23.03 |
| PGSC0003DMT400046782 | Potato | nucleus | 22.26 | 22.82 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 24.26 | 21.81 |
| TraesCS5D01G097200.2 | Wheat | nucleus | 24.41 | 21.74 |
| TraesCS5A01G084800.1 | Wheat | nucleus | 24.19 | 21.51 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 23.37 | 21.29 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 24.26 | 21.27 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 23.37 | 20.86 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 22.41 | 20.17 |
| Zm00001d041592_P002 | Maize | mitochondrion | 22.49 | 20.17 |
| Os11t0689500-01 | Rice | nucleus, plastid | 6.29 | 18.6 |
| TraesCS4A01G172700.2 | Wheat | cytosol | 13.76 | 15.72 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 2.66 | 13.85 |
| TraesCSU01G180900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 12.35 | 13.76 |
| Os11t0689650-00 | Rice | cytosol, mitochondrion, nucleus | 6.36 | 12.41 |
| TraesCSU01G189500.1 | Wheat | cytosol | 8.95 | 11.92 |
| OQU84043 | Sorghum | mitochondrion, nucleus | 13.91 | 11.8 |
| TraesCSU01G181000.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 9.02 | 11.79 |
Protein Annotations
Description
AT4G24680 (E=0.0) | FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BAT2, N-terminal (InterPro:IPR009738); Has 6700 Blast hits to 3976 proteins in 401 species: Archae - 2; Bacteria - 590; Metazoa - 2482; Fungi - 634; Plants - 203; Viruses - 19; Other Eukaryotes - 2770 (source: NCBI BLink).
Coordinates
chrA01:+:7956640..7961778
Molecular Weight (calculated)
146844.0 Da
IEP (calculated)
9.824
GRAVY (calculated)
-1.184
Length
1352 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTILGKVAVP KPINLPSQRL ENQGLDPNVE IVPKGTLSWG SKSSLNAWGT SSLSPRTESG PGSPSHLSTR PSTGGSVTRS RPSTADSDKA HDSSSTWDST
0101: SRPSSASGVL PANQASVALQ RPHSADTRPG SSHLSRFAEP VSETSATWGQ HAPTKKDGFS LTSGDFPSLG AEKESSEKSS VPQDAARPAS SSGRSVEERE
0201: ANVRIGDDNT WRRDDQPYSE DAPRHCREAG QLDSRCPQSY PNANFPHQYD GWRGPPVNNH QGGGWYRGNH PYGAPMGPGG FPIDPFPFYP PQVQPTPGHE
0301: ARPRGNHPAN GNMFRPPILD SYVHPRMQTR PGFYLGPVPH EGYYGPPMGY GGPSNRDLPF AGRPAGPHAY SQHSGQGGYD TSGSSVGLEQ NEPSHPQERQ
0401: RQYKVLLRPQ DGRNGEDETK REGILGNRLP NAEVVAHQMQ NSKNNRRGNN NEASDEVQPI RAENAAPEDP SLIQKIDGLN SKTRNGDGWQ NASSVVNRDQ
0501: QENKTRTVNS GNSVDKVSGR MPRTGHASDG TNSLHYKHGD LATNKNSELT AISGTSISRR STQQTQGRAD HQSQQRVKNE GNDGWRKTNV MSGSSPATLA
0601: SNSESFAEVN VGDSLDTGSV GKPVPGISVD PNDNQRTTMR ELARQRAQER QKEEEERARD QRAKALAKLE ELNRRSQAAE EGSASNASIA NIPEVPRSLS
0701: PARMVAKSTE STEESGKPSM QNAMTSTEDA HYVDPNHQDN LPRHRDGAAS KQKRLGYKQK QHIVFEKKTA GNSFSEATTE VSDVVPSPEV SNQGVISHNS
0801: DTPPTSSVST EPAFTKRKNN RNGKKKHKVD EAKLMNTTRA AVGKETKSGD ESIEIGRVRA PEIKFGSFPD PSLDIKVSGN SSDQISSSTN EESQSRAKTN
0901: SKTQHLRKTP RNTLVNKPAD KFPGNSTVIW APVHPQQKAD SSTGVGSQSA VPESSTSSKS LHQGQTSSRS KRVELERYVA KPIVKETAEQ MVSKNPVTAS
1001: PEMAENVLQK ENCGGEEGKG ILQPPGSPLK SRHGNGRQGK HGRGSAASTK ALEDGRLGTS NQPIRGTVNY HTSNQTGQIS VDSSKDRTAS STDGWNDGWY
1101: VTPETHHSAA TAEEMEASAS RTIAVGKDQG MSIQGKQQAS RSNYGDSKKP NTRDSSKAHM QQSGHGLGQQ DLHVASSEIR GQSGGRQYSR DRTYASQKRD
1201: VAGYEQQGFT PDQKMTSADT PDHSQNRSAS QEVQGGHNPN NMFQKNTGQN RRFGRGQESH GGWGSSSMQE NMHHHHQRPL SNRDRQKPNL HYEYKPVGSH
1301: AYDGEQLKDS SEGPRYREKG QGNQRHGGQK SYQQQRGSAG RNTGHGLSDE RN
0101: SRPSSASGVL PANQASVALQ RPHSADTRPG SSHLSRFAEP VSETSATWGQ HAPTKKDGFS LTSGDFPSLG AEKESSEKSS VPQDAARPAS SSGRSVEERE
0201: ANVRIGDDNT WRRDDQPYSE DAPRHCREAG QLDSRCPQSY PNANFPHQYD GWRGPPVNNH QGGGWYRGNH PYGAPMGPGG FPIDPFPFYP PQVQPTPGHE
0301: ARPRGNHPAN GNMFRPPILD SYVHPRMQTR PGFYLGPVPH EGYYGPPMGY GGPSNRDLPF AGRPAGPHAY SQHSGQGGYD TSGSSVGLEQ NEPSHPQERQ
0401: RQYKVLLRPQ DGRNGEDETK REGILGNRLP NAEVVAHQMQ NSKNNRRGNN NEASDEVQPI RAENAAPEDP SLIQKIDGLN SKTRNGDGWQ NASSVVNRDQ
0501: QENKTRTVNS GNSVDKVSGR MPRTGHASDG TNSLHYKHGD LATNKNSELT AISGTSISRR STQQTQGRAD HQSQQRVKNE GNDGWRKTNV MSGSSPATLA
0601: SNSESFAEVN VGDSLDTGSV GKPVPGISVD PNDNQRTTMR ELARQRAQER QKEEEERARD QRAKALAKLE ELNRRSQAAE EGSASNASIA NIPEVPRSLS
0701: PARMVAKSTE STEESGKPSM QNAMTSTEDA HYVDPNHQDN LPRHRDGAAS KQKRLGYKQK QHIVFEKKTA GNSFSEATTE VSDVVPSPEV SNQGVISHNS
0801: DTPPTSSVST EPAFTKRKNN RNGKKKHKVD EAKLMNTTRA AVGKETKSGD ESIEIGRVRA PEIKFGSFPD PSLDIKVSGN SSDQISSSTN EESQSRAKTN
0901: SKTQHLRKTP RNTLVNKPAD KFPGNSTVIW APVHPQQKAD SSTGVGSQSA VPESSTSSKS LHQGQTSSRS KRVELERYVA KPIVKETAEQ MVSKNPVTAS
1001: PEMAENVLQK ENCGGEEGKG ILQPPGSPLK SRHGNGRQGK HGRGSAASTK ALEDGRLGTS NQPIRGTVNY HTSNQTGQIS VDSSKDRTAS STDGWNDGWY
1101: VTPETHHSAA TAEEMEASAS RTIAVGKDQG MSIQGKQQAS RSNYGDSKKP NTRDSSKAHM QQSGHGLGQQ DLHVASSEIR GQSGGRQYSR DRTYASQKRD
1201: VAGYEQQGFT PDQKMTSADT PDHSQNRSAS QEVQGGHNPN NMFQKNTGQN RRFGRGQESH GGWGSSSMQE NMHHHHQRPL SNRDRQKPNL HYEYKPVGSH
1301: AYDGEQLKDS SEGPRYREKG QGNQRHGGQK SYQQQRGSAG RNTGHGLSDE RN
0001: MTSSTTGDRS RWGTTRRSGM TILGKVAVPK PINLPSQRLE NQGLDPNVEI VPKGTLSWGS KSSLNAWGTS SLSPRTESGP GSPSHLSNRP SSGGSVTRPS
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ DAGPHARPPS SSGRSVEGQG VDCTEEANDR IGDANSWRRE NQPYSEDAPR HCREEGQLDS RGSQSYPNAN FPPRYDAWRG PPVNNHQGGG
0301: WYGGNHPYGA PMGPGGFHMD PFPFYPTQVP PAPGHGAGPR GNHANNERMF RPPMLDSYVH PRMQTRPGFY VGPAPHEGYY GPPMGYGSPS NRDLPFAGRP
0401: TGPHAYNNHS GQGGYDTPGS SVSLERNESS HSQETQRPYK VLLKHQDGRF GEDNAKREEF LGNRLPNAEK IAQQMQTSRN ERREIRNDAS GEVQPVKAEL
0501: AAPGDPSLIQ KIEGLNAKTR TNDGWQNSSS VVNRDEQESQ PRTLNSGNSA NKVSARNHRT GHASDSKNSS HYNQGDSATN KNAEPAAMGG TSIFRRPTQQ
0601: TQGRADPQTK RIVNSEGNDA WQKTTVMSGS SHTTLATNTE SFREVNVDDS LDTESIRRPG SGISADPKDN QRSTMRELAR QRAQQRQKEE EERARDQRAK
0701: ALAKLEELNR RSQIYEEGSV KNMEAASNAS PADMPTDPGS HSSNATNSVE PTGGSGKNTT QNTRTSTEYA NNVGPSQQDN LPRDGGASKQ KRLGYKQKQN
0801: IIFEKKPTGS SVATAEVFDV VPSPEVVNEG VSSNNSDMPA TSTVSAESTF PKRKNNRNGK KKHKAEETAT MNTTRVAVGK ETKSGDESIE TARARAAEIE
0901: LGSVSVPSLD IKVSGDSSEQ ISSFTNEESQ NRAKNNWKSQ HVRRTQRNSL VNKPAEKFSG NNAVIWAPVH PQQKADVSTG GGSQTTVPEF GTSSKSQHQG
1001: QTSSKSKRVE IERYVPKPIV KEMAEQIVSK NLVTSAPDMS ENVNQKENRG GEGTGILQPS GSTAGKSGSP SKSRHGNGRQ GKHGREHASW HQRGSGAPTK
1101: ALEDGQFVTS NQPIRGTVNY HSSKQTEQIA AKDQTTCNKD GWNDGWYMTP ETHYSAAEEM ESSAVGKDQG MSMHGRQHAS RSNKDGGSNY GDPKKGNKRD
1201: FNKAHTQHSG HGFSQPDLPA ASKEGRVPGD HVWHTANRTG KYGGRESTRD KPYGSQEKNV VGYEHQGFTT EQKTTSADTQ AQLQNRSTNK EVQVEQNPNS
1301: MFQKNTGQGR RFGRGQESQG GWGLPAQENM HHHHQRPPSN RDRQKQNLHY EYKPVGSHTY DGERSREQSK ESSQTEGPRY REKGQGQQRQ GGYQQQRGTS
1401: GRNGGHGFTG DRN
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ DAGPHARPPS SSGRSVEGQG VDCTEEANDR IGDANSWRRE NQPYSEDAPR HCREEGQLDS RGSQSYPNAN FPPRYDAWRG PPVNNHQGGG
0301: WYGGNHPYGA PMGPGGFHMD PFPFYPTQVP PAPGHGAGPR GNHANNERMF RPPMLDSYVH PRMQTRPGFY VGPAPHEGYY GPPMGYGSPS NRDLPFAGRP
0401: TGPHAYNNHS GQGGYDTPGS SVSLERNESS HSQETQRPYK VLLKHQDGRF GEDNAKREEF LGNRLPNAEK IAQQMQTSRN ERREIRNDAS GEVQPVKAEL
0501: AAPGDPSLIQ KIEGLNAKTR TNDGWQNSSS VVNRDEQESQ PRTLNSGNSA NKVSARNHRT GHASDSKNSS HYNQGDSATN KNAEPAAMGG TSIFRRPTQQ
0601: TQGRADPQTK RIVNSEGNDA WQKTTVMSGS SHTTLATNTE SFREVNVDDS LDTESIRRPG SGISADPKDN QRSTMRELAR QRAQQRQKEE EERARDQRAK
0701: ALAKLEELNR RSQIYEEGSV KNMEAASNAS PADMPTDPGS HSSNATNSVE PTGGSGKNTT QNTRTSTEYA NNVGPSQQDN LPRDGGASKQ KRLGYKQKQN
0801: IIFEKKPTGS SVATAEVFDV VPSPEVVNEG VSSNNSDMPA TSTVSAESTF PKRKNNRNGK KKHKAEETAT MNTTRVAVGK ETKSGDESIE TARARAAEIE
0901: LGSVSVPSLD IKVSGDSSEQ ISSFTNEESQ NRAKNNWKSQ HVRRTQRNSL VNKPAEKFSG NNAVIWAPVH PQQKADVSTG GGSQTTVPEF GTSSKSQHQG
1001: QTSSKSKRVE IERYVPKPIV KEMAEQIVSK NLVTSAPDMS ENVNQKENRG GEGTGILQPS GSTAGKSGSP SKSRHGNGRQ GKHGREHASW HQRGSGAPTK
1101: ALEDGQFVTS NQPIRGTVNY HSSKQTEQIA AKDQTTCNKD GWNDGWYMTP ETHYSAAEEM ESSAVGKDQG MSMHGRQHAS RSNKDGGSNY GDPKKGNKRD
1201: FNKAHTQHSG HGFSQPDLPA ASKEGRVPGD HVWHTANRTG KYGGRESTRD KPYGSQEKNV VGYEHQGFTT EQKTTSADTQ AQLQNRSTNK EVQVEQNPNS
1301: MFQKNTGQGR RFGRGQESQG GWGLPAQENM HHHHQRPPSN RDRQKQNLHY EYKPVGSHTY DGERSREQSK ESSQTEGPRY REKGQGQQRQ GGYQQQRGTS
1401: GRNGGHGFTG DRN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.