Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003986.1-P | |
| Bra004407.1-P | |
| Bra007875.1-P | |
| Bra010376.1-P | |
| Bra024211.1-P | |
| Bra026268.1-P |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11025 | Canola | nucleus | 97.49 | 97.56 |
| AT4G24680.1 | Thale cress | nucleus | 71.81 | 70.15 |
| Bra013824.1-P | Field mustard | cytosol | 67.5 | 69.6 |
| KRH03258 | Soybean | mitochondrion, nucleus | 34.43 | 30.57 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 34.94 | 30.51 |
| KRH57096 | Soybean | mitochondrion, nucleus | 34.29 | 30.37 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 31.49 | 28.6 |
| PGSC0003DMT400046782 | Potato | nucleus | 22.6 | 23.88 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 24.75 | 23.79 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 24.32 | 22.54 |
| TraesCS5D01G097200.2 | Wheat | nucleus | 23.96 | 22.0 |
| TraesCS5A01G084800.1 | Wheat | nucleus | 23.74 | 21.78 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 24.03 | 21.73 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 22.81 | 21.43 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 23.1 | 21.25 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 22.81 | 21.17 |
| Zm00001d041592_P002 | Maize | mitochondrion | 22.31 | 20.64 |
| Os11t0689500-01 | Rice | nucleus, plastid | 6.6 | 20.13 |
| TraesCS4A01G172700.2 | Wheat | cytosol | 14.28 | 16.82 |
| TraesCSU01G180900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 12.91 | 14.83 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 2.73 | 14.62 |
| Os11t0689650-00 | Rice | cytosol, mitochondrion, nucleus | 6.74 | 13.56 |
| TraesCSU01G189500.1 | Wheat | cytosol | 9.4 | 12.91 |
| TraesCSU01G181000.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 9.4 | 12.66 |
| OQU84043 | Sorghum | mitochondrion, nucleus | 13.92 | 12.18 |
Protein Annotations
Description
AT4G24680 (E=0.0) | FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BAT2, N-terminal (InterPro:IPR009738); Has 6700 Blast hits to 3976 proteins in 401 species: Archae - 2; Bacteria - 590; Metazoa - 2482; Fungi - 634; Plants - 203; Viruses - 19; Other Eukaryotes - 2770 (source: NCBI BLink).
Coordinates
chrA03:+:25666653..25672525
Molecular Weight (calculated)
151612.0 Da
IEP (calculated)
9.593
GRAVY (calculated)
-1.197
Length
1394 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTSTTTGDRR WGTTRRSGMT ILGKVAVPKP INLPSQRLEN QGLDPNVEIV PKGTLSWGSK SPLNAWGTSS LSPRTESGPG SPSHLSNRPS SGGSVTRPST
0101: ADSDKAHDSS STAWDSNSRP SSASGVFPSN QASVALQRPH SADTRPGSSH LSRFAESVSE TSATWGQHGD TPAKKDGFSL TSGDFPSLGT EKESTEKSAM
0201: PQDAGPGTRP ASSSGRSAEE RGVDCTQEAN VRNGDDSAWR RDNQPYSENE SRYCREEGQL DSRGLQPYPN ANFPHQYDAW RGPPVNNHQG GSWYRGNQPY
0301: GPPMGPGGFH VDPFPFYPTQ VPPVPGHETG PRGNHAINEK MFRPPILDPY VHPRPGFYHG PVPREGYYGP PMGYGGPNNR DLPFAGRPAG PHAYHQHPGQ
0401: GRYDTSASSV ALERNEPSHS QERQYKILLK PQDGRLKEDE AKREEFLGNR PSTAEKVAPH MQTSKNNRRV NNNETSGEVQ PITVENAARE DPSLIQKIEG
0501: LNAKTTLNSG TSANKVSTRM PRSGHASDSQ NSLPYKQVDP ATNKSAELAA ISGTTISRRS TQQTQGGADH QAKQRVNSGG NDGWRKTAVM SGSSAVTLAP
0601: NPERFAEINV GDTLDTDSIG KPGSGISVEP NDNQRTTMRE LARQRAQQRQ KEEEERARDQ RAKALAKLEE LNRRSQLAGE GSVKNLEAAH NASTPDMPEV
0701: PLSHSPASRE KKTTVTAEDS IEVTEDSGKT LLPSPEDANN EGSTQHDNPP RHHDGAASKQ KRLGYKQKQN IVFEKKMAGS PFSEATTEVV DVVPPPEVSN
0801: EGVLGHNSVM PAASSVSTES TNTKRKNNRN GKKKHRAEET TAMNPTRATV GKDSKSGDES TEIGRERAPE MEFGSLSVPS LDIKVSGNSS DQISSFTNEE
0901: SQSRVKHNWK SQHLRRNPRN SVGNKPAEKF SGSSTVIWAP VHPQHKADIS TDAGSQKTVP EFSTSSKSQH QGQTSSKSKR VEMERYVAKP IVKEMAEQSV
1001: SKNPITTAPE MTENVLQKEN CGGEGTGILQ PSGSTAGKAG SPSKSRHGNG MQGKHGRDHG SSHQRGSVAS TKALEDGQFR GTMNYHRNNQ TEQIAVGSSK
1101: DHTTCNPDGW NDGWYMPPET HSSAAEEVEA NGPGTVAVGK DQGMSIHGKQ HASRSNKDGG SNYSDPRKAN KRDPSKAHMQ QSGHGVGQQD LPVASKESRG
1201: PEDHVSHTAV NSNVNRGGNH GGREYTRDKT YVSQKRDVAG YGHQRFASEQ KMTSADTPAQ TQNRSTTKEV QGEHHPNSMF QKNTDHSHRF GRGHHDSQGG
1301: WGSSAQENMN HHHHQRPASN RDRQKQNLHY EYKHVGSHTH DGEQQFKDGS QAEGPPRYRE KGQGQQRHGG QKMYQQQRGS AGRNTGHGLT DERN
0101: ADSDKAHDSS STAWDSNSRP SSASGVFPSN QASVALQRPH SADTRPGSSH LSRFAESVSE TSATWGQHGD TPAKKDGFSL TSGDFPSLGT EKESTEKSAM
0201: PQDAGPGTRP ASSSGRSAEE RGVDCTQEAN VRNGDDSAWR RDNQPYSENE SRYCREEGQL DSRGLQPYPN ANFPHQYDAW RGPPVNNHQG GSWYRGNQPY
0301: GPPMGPGGFH VDPFPFYPTQ VPPVPGHETG PRGNHAINEK MFRPPILDPY VHPRPGFYHG PVPREGYYGP PMGYGGPNNR DLPFAGRPAG PHAYHQHPGQ
0401: GRYDTSASSV ALERNEPSHS QERQYKILLK PQDGRLKEDE AKREEFLGNR PSTAEKVAPH MQTSKNNRRV NNNETSGEVQ PITVENAARE DPSLIQKIEG
0501: LNAKTTLNSG TSANKVSTRM PRSGHASDSQ NSLPYKQVDP ATNKSAELAA ISGTTISRRS TQQTQGGADH QAKQRVNSGG NDGWRKTAVM SGSSAVTLAP
0601: NPERFAEINV GDTLDTDSIG KPGSGISVEP NDNQRTTMRE LARQRAQQRQ KEEEERARDQ RAKALAKLEE LNRRSQLAGE GSVKNLEAAH NASTPDMPEV
0701: PLSHSPASRE KKTTVTAEDS IEVTEDSGKT LLPSPEDANN EGSTQHDNPP RHHDGAASKQ KRLGYKQKQN IVFEKKMAGS PFSEATTEVV DVVPPPEVSN
0801: EGVLGHNSVM PAASSVSTES TNTKRKNNRN GKKKHRAEET TAMNPTRATV GKDSKSGDES TEIGRERAPE MEFGSLSVPS LDIKVSGNSS DQISSFTNEE
0901: SQSRVKHNWK SQHLRRNPRN SVGNKPAEKF SGSSTVIWAP VHPQHKADIS TDAGSQKTVP EFSTSSKSQH QGQTSSKSKR VEMERYVAKP IVKEMAEQSV
1001: SKNPITTAPE MTENVLQKEN CGGEGTGILQ PSGSTAGKAG SPSKSRHGNG MQGKHGRDHG SSHQRGSVAS TKALEDGQFR GTMNYHRNNQ TEQIAVGSSK
1101: DHTTCNPDGW NDGWYMPPET HSSAAEEVEA NGPGTVAVGK DQGMSIHGKQ HASRSNKDGG SNYSDPRKAN KRDPSKAHMQ QSGHGVGQQD LPVASKESRG
1201: PEDHVSHTAV NSNVNRGGNH GGREYTRDKT YVSQKRDVAG YGHQRFASEQ KMTSADTPAQ TQNRSTTKEV QGEHHPNSMF QKNTDHSHRF GRGHHDSQGG
1301: WGSSAQENMN HHHHQRPASN RDRQKQNLHY EYKHVGSHTH DGEQQFKDGS QAEGPPRYRE KGQGQQRHGG QKMYQQQRGS AGRNTGHGLT DERN
0001: MTSSTTGDRR WGTTRRSGMT ILGKVAVPKP INLPSQRLEN QGLDPNVEIV PKGTLSWGSK SSLNAWGTSS LSPRTESGPG SPSHLSNRPS SGGSVTRPST
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQD AGPHARPPSS SGRSVEGQGV DCTEEANDRI GDANSWRREN QPYSEDAPRH CREEGQLDSR GSQSYPNANF PPRYDAWRGP PVNNHQGGGW
0301: YGGNHPYGAP MGPGGFHMDP FPFYPTQVPP APGHGAGPRG NHANNERMFR PPMLDSYVHP RMQTRPGFYV GPAPHEGYYG PPMGYGSPSN RDLPFAGRPT
0401: GPHAYNNHSG QGGYDTPGSS VSLERNESSH SQETQRPYKV LLKHQDGRFG EDNAKREEFL GNRLPNAEKI AQQMQTSRNE RREIRNDASG EVQPVKAELA
0501: APGDPSLIQK IEGLNAKTRT NDGWQNSSSV VNRDEQESQP RTLNSGNSAN KVSARNHRTG HASDSKNSSH YNQGDSATNK NAEPAAMGGT SIFRRPTQQT
0601: QGRADPQTKR IVNSEGNDAW QKTTVMSGSS HTTLATNTES FREVNVDDSL DTESIRRPGS GISADPKDNQ RSTMRELARQ RAQQRQKEEE ERARDQRAKA
0701: LAKLEELNRR SQIYEEGSVK NMEAASNASP ADMPTDPGSH SSNATNSVEP TGGSGKNTTQ NTRTSTEYAN NVGPSQQDNL PRDGGASKQK RLGYKQKQNI
0801: IFEKKPTGSS VATAEVFDVV PSPEVVNEGV SSNNSDMPAT STVSAESTFP KRKNNRNGKK KHKAEETATM NTTRVAVGKE TKSGDESIET ARARAAEIEL
0901: GSVSVPSLDI KVSGDSSEQI SSFTNEESQN RAKNNWKSQH VRRTQRNSLV NKPAEKFSGN NAVIWAPVHP QQKADVSTGG GSQTTVPEFG TSSKSQHQGQ
1001: TSSKSKRVEI ERYVPKPIVK EMAEQIVSKN LVTSAPDMSE NVNQKENRGG EGTGILQPSG STAGKSGSPS KSRHGNGRQG KHGREHASWH QRGSGAPTKA
1101: LEDGQFVTSN QPIRGTVNYH SSKQTEQIAA KDQTTCNKDG WNDGWYMTPE THYSAAEEME SSAVGKDQGM SMHGRQHASR SNKDGGSNYG DPKKGNKRDF
1201: NKAHTQHSGH GFSQPDLPAA SKEGRVPGDH VWHTANRTGK YGGRESTRDK PYGSQEKNVV GYEHQGFTTE QKTTSADTQA QLQNRSTNKE VQVEQNPNSM
1301: FQKNTGQGRR FGRGQESQGG WGLPAQENMH HHHQRPPSNR DRQKQNLHYE YKPVGSHTYD GERSREQSKE SSQTEGPRYR EKGQGQQRQG GYQQQRGTSG
1401: RNGGHGFTGD RN
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQD AGPHARPPSS SGRSVEGQGV DCTEEANDRI GDANSWRREN QPYSEDAPRH CREEGQLDSR GSQSYPNANF PPRYDAWRGP PVNNHQGGGW
0301: YGGNHPYGAP MGPGGFHMDP FPFYPTQVPP APGHGAGPRG NHANNERMFR PPMLDSYVHP RMQTRPGFYV GPAPHEGYYG PPMGYGSPSN RDLPFAGRPT
0401: GPHAYNNHSG QGGYDTPGSS VSLERNESSH SQETQRPYKV LLKHQDGRFG EDNAKREEFL GNRLPNAEKI AQQMQTSRNE RREIRNDASG EVQPVKAELA
0501: APGDPSLIQK IEGLNAKTRT NDGWQNSSSV VNRDEQESQP RTLNSGNSAN KVSARNHRTG HASDSKNSSH YNQGDSATNK NAEPAAMGGT SIFRRPTQQT
0601: QGRADPQTKR IVNSEGNDAW QKTTVMSGSS HTTLATNTES FREVNVDDSL DTESIRRPGS GISADPKDNQ RSTMRELARQ RAQQRQKEEE ERARDQRAKA
0701: LAKLEELNRR SQIYEEGSVK NMEAASNASP ADMPTDPGSH SSNATNSVEP TGGSGKNTTQ NTRTSTEYAN NVGPSQQDNL PRDGGASKQK RLGYKQKQNI
0801: IFEKKPTGSS VATAEVFDVV PSPEVVNEGV SSNNSDMPAT STVSAESTFP KRKNNRNGKK KHKAEETATM NTTRVAVGKE TKSGDESIET ARARAAEIEL
0901: GSVSVPSLDI KVSGDSSEQI SSFTNEESQN RAKNNWKSQH VRRTQRNSLV NKPAEKFSGN NAVIWAPVHP QQKADVSTGG GSQTTVPEFG TSSKSQHQGQ
1001: TSSKSKRVEI ERYVPKPIVK EMAEQIVSKN LVTSAPDMSE NVNQKENRGG EGTGILQPSG STAGKSGSPS KSRHGNGRQG KHGREHASWH QRGSGAPTKA
1101: LEDGQFVTSN QPIRGTVNYH SSKQTEQIAA KDQTTCNKDG WNDGWYMTPE THYSAAEEME SSAVGKDQGM SMHGRQHASR SNKDGGSNYG DPKKGNKRDF
1201: NKAHTQHSGH GFSQPDLPAA SKEGRVPGDH VWHTANRTGK YGGRESTRDK PYGSQEKNVV GYEHQGFTTE QKTTSADTQA QLQNRSTNKE VQVEQNPNSM
1301: FQKNTGQGRR FGRGQESQGG WGLPAQENMH HHHQRPPSNR DRQKQNLHYE YKPVGSHTYD GERSREQSKE SSQTEGPRYR EKGQGQQRQG GYQQQRGTSG
1401: RNGGHGFTGD RN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.