Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400008728 | |
| PGSC0003DMT400034191 | |
| PGSC0003DMT400047245 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24680.1 | PGSC0003DMT400008728 | AT1G69690.1 | 21798944 |
| AT4G24680.1 | PGSC0003DMT400034191 | AT4G28300.1 | 21798944 |
| AT4G24680.1 | PGSC0003DMT400047245 | AT4G28300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g112660.2.1 | Tomato | mitochondrion | 92.8 | 79.74 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 40.03 | 33.08 |
| KRH03258 | Soybean | mitochondrion, nucleus | 35.1 | 29.49 |
| KRH57096 | Soybean | mitochondrion, nucleus | 34.95 | 29.29 |
| CDX92648 | Canola | nucleus | 23.96 | 22.83 |
| Bra019213.1-P | Field mustard | nucleus | 23.88 | 22.6 |
| CDY11025 | Canola | nucleus | 23.81 | 22.54 |
| Bra013824.1-P | Field mustard | cytosol | 22.82 | 22.26 |
| AT4G24680.1 | Thale cress | nucleus | 23.88 | 22.07 |
| CDY03428 | Canola | nucleus | 22.74 | 21.87 |
| CDY34301 | Canola | nucleus | 22.59 | 21.7 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 4.02 | 20.38 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 21.61 | 19.66 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 20.92 | 18.6 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 19.94 | 17.36 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 19.71 | 17.31 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 20.02 | 17.12 |
| TraesCS5A01G084800.1 | Wheat | nucleus | 19.71 | 17.11 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 19.48 | 17.09 |
| TraesCS5D01G097200.2 | Wheat | nucleus | 19.48 | 16.93 |
| Zm00001d041592_P002 | Maize | mitochondrion | 18.5 | 16.19 |
| TraesCSU01G189500.1 | Wheat | cytosol | 11.3 | 14.68 |
| TraesCSU01G181000.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 11.3 | 14.4 |
| Os11t0689650-00 | Rice | cytosol, mitochondrion, nucleus | 7.2 | 13.71 |
| TraesCS4A01G172700.2 | Wheat | cytosol | 11.37 | 12.68 |
| TraesCSU01G180900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 11.3 | 12.27 |
| OQU84043 | Sorghum | mitochondrion, nucleus | 12.05 | 9.98 |
| Os11t0689500-01 | Rice | nucleus, plastid | 3.11 | 8.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400046782 | EnsemblPlantsGene:PGSC0003DMG402018164 | InterPro:MOS1-like | ncoils:Coil | PANTHER:PTHR34805 | PGSC:PGSC0003DMG402018164 |
| SEG:seg | UniParc:UPI00029572CE | UniProt:M1BJL8 | MapMan:35.1 | : | : |
Description
Protein MODIFIER OF SNC1 1 [Source:PGSC_GENE;Acc:PGSC0003DMG402018164]
Coordinates
chr3:+:52455424..52463443
Molecular Weight (calculated)
144249.0 Da
IEP (calculated)
9.152
GRAVY (calculated)
-1.066
Length
1319 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEKWQGDPHQ YHSPNVPPQH FDAWRGPPMN SPAALWYRGP PGGPPYGAPV PPGGFPIEPF PYFPPQMPPP AIANSQPGPP PGPGSRGHHP RGGDMYRPQI
0101: ADAYIRPNMP FRPGFYSGPV AYEGYFGPPM GYCNSNEREI PLMGMPPGPP VYNRYSGPTT PDPSNSHARI GSHGSNTKAM QEALESSRPD DAKGPFKVLL
0201: KHDARDERET WEHAAPTNGP YHDRSSQRSL QKHERGGEHG SEKELHSRRT TGSGNCYLRS YGDRGGDSSD TTNANSLESV NTMKVADGSW AKKSGYVESS
0301: GGVPPSSLAP EKVSAPAVTA KDSSLMQKIE GLNAKARASD GRFEAPYVSS EEDMNKSQLN SKVTNSVNEA RGGLMSSERT HTSVTTGNKG GHSIAAMSRR
0401: PYHGAQARND HLGKPKVDSH DDGWRKKPVA AGSSAVASGT YLEPASNVHA CESGPQVEAV EHALTDISAS VEKESLSEFH DSADTQAQRT KMKELARQRA
0501: LQLQKEEEER IKQQKAKALA KLEELNRRMQ AGDALCQKAE KDSPADVIKQ DLQGSSAPET VVSTVKPQAR NATLVAHSDV IDANGRMLNK DSEYFNPPVV
0601: LEFGTSIMVQ SEIAIPQPQA FLSKKDANRV SASHGKETCQ SSDGGLIRHK RTSFKQRPNM TPKNINEKSV PVCVTEVSKD PTDIINNVQS TEAHEVGLNA
0701: ELNMVNNAKV VVESSVQPRR KGNRTNKNKQ KLDAVLPRPA SPSPVPNDSN PVKVRTQQEK LNSAQLVLDV SSNQAASSDN VVQPSDQSPP LPTEEGHGRV
0801: VNQWKPQHPR RTQRNQHSNI HTDKFQGGDT VVWAPVRSQS KTEDVAEASQ KTGSNSIGPL KSDNVVQSNS KSKRAEMERY VPKPVAKELA QHGSSQQPLL
0901: LSGNSPGPDG TTGRAESRPE NAGCSVPTGS ATECFSIESR DGDGKHNNNK QGKAHGVWRQ RGSTELALDT SKNDCKSLDQ TQSLKPDGDS LRYESKCSSE
1001: FDVSDGWNMP DDFEGQHTTI PVVPDEGTRG KGKRYPSKGH RSTGNFGYEY KNNSVGPQQN HTLSGATEIN QMDRRVAAKE SRGVGNRTPP HWQPKSHMLA
1101: VNNQHEGVST GAQHIIMEGD RGNKRDYHHD KVSNPLRSEK ESRNIGAGQA DSFSSEDKIV SEVPNVRNPD PRRERKPASF RGRPYSPNQG PVVKAESAPA
1201: ESAEAVQEQS NSGLRRNINQ NNRSIRTQES HGDSFSVKDN RQHNTSSGRE RQRNNMHYEY QPVGQYNNSK PSNFEEAADG SHNVDQKRYR ERGQVQSRRG
1301: GGNFHGRQGG YDRVNANYD
0101: ADAYIRPNMP FRPGFYSGPV AYEGYFGPPM GYCNSNEREI PLMGMPPGPP VYNRYSGPTT PDPSNSHARI GSHGSNTKAM QEALESSRPD DAKGPFKVLL
0201: KHDARDERET WEHAAPTNGP YHDRSSQRSL QKHERGGEHG SEKELHSRRT TGSGNCYLRS YGDRGGDSSD TTNANSLESV NTMKVADGSW AKKSGYVESS
0301: GGVPPSSLAP EKVSAPAVTA KDSSLMQKIE GLNAKARASD GRFEAPYVSS EEDMNKSQLN SKVTNSVNEA RGGLMSSERT HTSVTTGNKG GHSIAAMSRR
0401: PYHGAQARND HLGKPKVDSH DDGWRKKPVA AGSSAVASGT YLEPASNVHA CESGPQVEAV EHALTDISAS VEKESLSEFH DSADTQAQRT KMKELARQRA
0501: LQLQKEEEER IKQQKAKALA KLEELNRRMQ AGDALCQKAE KDSPADVIKQ DLQGSSAPET VVSTVKPQAR NATLVAHSDV IDANGRMLNK DSEYFNPPVV
0601: LEFGTSIMVQ SEIAIPQPQA FLSKKDANRV SASHGKETCQ SSDGGLIRHK RTSFKQRPNM TPKNINEKSV PVCVTEVSKD PTDIINNVQS TEAHEVGLNA
0701: ELNMVNNAKV VVESSVQPRR KGNRTNKNKQ KLDAVLPRPA SPSPVPNDSN PVKVRTQQEK LNSAQLVLDV SSNQAASSDN VVQPSDQSPP LPTEEGHGRV
0801: VNQWKPQHPR RTQRNQHSNI HTDKFQGGDT VVWAPVRSQS KTEDVAEASQ KTGSNSIGPL KSDNVVQSNS KSKRAEMERY VPKPVAKELA QHGSSQQPLL
0901: LSGNSPGPDG TTGRAESRPE NAGCSVPTGS ATECFSIESR DGDGKHNNNK QGKAHGVWRQ RGSTELALDT SKNDCKSLDQ TQSLKPDGDS LRYESKCSSE
1001: FDVSDGWNMP DDFEGQHTTI PVVPDEGTRG KGKRYPSKGH RSTGNFGYEY KNNSVGPQQN HTLSGATEIN QMDRRVAAKE SRGVGNRTPP HWQPKSHMLA
1101: VNNQHEGVST GAQHIIMEGD RGNKRDYHHD KVSNPLRSEK ESRNIGAGQA DSFSSEDKIV SEVPNVRNPD PRRERKPASF RGRPYSPNQG PVVKAESAPA
1201: ESAEAVQEQS NSGLRRNINQ NNRSIRTQES HGDSFSVKDN RQHNTSSGRE RQRNNMHYEY QPVGQYNNSK PSNFEEAADG SHNVDQKRYR ERGQVQSRRG
1301: GGNFHGRQGG YDRVNANYD
0001: MTSSTTGDRR WGTTRRSGMT ILGKVAVPKP INLPSQRLEN QGLDPNVEIV PKGTLSWGSK SSLNAWGTSS LSPRTESGPG SPSHLSNRPS SGGSVTRPST
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQE ANDRIGDANS WRRENQPYSE DAPRHCREEG QLDSRGSQSY PNANFPPRYD AWRGPPVNNH QGGGWYGGNH PYGAPMGPGG FHMDPFPFYP
0301: TQVPPAPGHG AGPRGNHANN ERMFRPPMLD SYVHPRMQTR PGFYVGPAPH EGYYGPPMGY GSPSNRDLPF AGRPTGPHAY NNHSGQGGYD TPGSSVSLER
0401: NESSHSQETQ RPYKVLLKHQ DGRFGEDNAK REEFLGNRLP NAEKIAQQMQ TSRNERREIR NDASGEVQPV KAELAAPGDP SLIQKIEGLN AKTRTNDGWQ
0501: NSSSVVNRDE QESQPRTLNS GNSANKVSAR NHRTGHASDS KNSSHYNQGD SATNKNAEPA AMGGTSIFRR PTQQTQGRAD PQTKRIVNSE GNDAWQKTTV
0601: MSGSSHTTLA TNTESFREVN VDDSLDTESI RRPGSGISAD PKDNQRSTMR ELARQRAQQR QKEEEERARD QRAKALAKLE ELNRRSQIYE EGSVKNMEAA
0701: SNASPADMPT DPGSHSSNAT NSVEPTGGSG KNTTQNTRTS TEYANNVGPS QQDNLPRDGG ASKQKRLGYK QKQNIIFEKK PTGSSVATAE VFDVVPSPEV
0801: VNEGVSSNNS DMPATSTVSA ESTFPKRKNN RNGKKKHKAE ETATMNTTRV AVGKETKSGD ESIETARARA AEIELGSVSV PSLDIKVSGD SSEQISSFTN
0901: EESQNRAKNN WKSQHVRRTQ RNSLVNKPAE KFSGNNAVIW APVHPQQKAD VSTGGGSQTT VPEFGTSSKS QHQGQTSSKS KRVEIERYVP KPIVKEMAEQ
1001: IVSKNLVTSA PDMSENVNQK ENRGGEGTGI LQPSGSTAGK SGSPSKSRHG NGRQGKHGRE HASWHQRGSG APTKALEDGQ FVTSNQPIRG TVNYHSSKQT
1101: EQIAAKDQTT CNKDGWNDGW YMTPETHYSA AEEMESSAVG KDQGMSMHGR QHASRSNKDG GSNYGDPKKG NKRDFNKAHT QHSGHGFSQP DLPAASKEGR
1201: VPGDHVWHTA NRTGKYGGRE STRDKPYGSQ EKNVVGYEHQ GFTTEQKTTS ADTQAQLQNR STNKEVQVEQ NPNSMFQKNT GQGRRFGRGQ ESQGGWGLPA
1301: QENMHHHHQR PPSNRDRQKQ NLHYEYKPVG SHTYDGERSR EQSKESSQTE GPRYREKGQG QQRQGGYQQQ RGTSGRNGGH GFTGDRN
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQE ANDRIGDANS WRRENQPYSE DAPRHCREEG QLDSRGSQSY PNANFPPRYD AWRGPPVNNH QGGGWYGGNH PYGAPMGPGG FHMDPFPFYP
0301: TQVPPAPGHG AGPRGNHANN ERMFRPPMLD SYVHPRMQTR PGFYVGPAPH EGYYGPPMGY GSPSNRDLPF AGRPTGPHAY NNHSGQGGYD TPGSSVSLER
0401: NESSHSQETQ RPYKVLLKHQ DGRFGEDNAK REEFLGNRLP NAEKIAQQMQ TSRNERREIR NDASGEVQPV KAELAAPGDP SLIQKIEGLN AKTRTNDGWQ
0501: NSSSVVNRDE QESQPRTLNS GNSANKVSAR NHRTGHASDS KNSSHYNQGD SATNKNAEPA AMGGTSIFRR PTQQTQGRAD PQTKRIVNSE GNDAWQKTTV
0601: MSGSSHTTLA TNTESFREVN VDDSLDTESI RRPGSGISAD PKDNQRSTMR ELARQRAQQR QKEEEERARD QRAKALAKLE ELNRRSQIYE EGSVKNMEAA
0701: SNASPADMPT DPGSHSSNAT NSVEPTGGSG KNTTQNTRTS TEYANNVGPS QQDNLPRDGG ASKQKRLGYK QKQNIIFEKK PTGSSVATAE VFDVVPSPEV
0801: VNEGVSSNNS DMPATSTVSA ESTFPKRKNN RNGKKKHKAE ETATMNTTRV AVGKETKSGD ESIETARARA AEIELGSVSV PSLDIKVSGD SSEQISSFTN
0901: EESQNRAKNN WKSQHVRRTQ RNSLVNKPAE KFSGNNAVIW APVHPQQKAD VSTGGGSQTT VPEFGTSSKS QHQGQTSSKS KRVEIERYVP KPIVKEMAEQ
1001: IVSKNLVTSA PDMSENVNQK ENRGGEGTGI LQPSGSTAGK SGSPSKSRHG NGRQGKHGRE HASWHQRGSG APTKALEDGQ FVTSNQPIRG TVNYHSSKQT
1101: EQIAAKDQTT CNKDGWNDGW YMTPETHYSA AEEMESSAVG KDQGMSMHGR QHASRSNKDG GSNYGDPKKG NKRDFNKAHT QHSGHGFSQP DLPAASKEGR
1201: VPGDHVWHTA NRTGKYGGRE STRDKPYGSQ EKNVVGYEHQ GFTTEQKTTS ADTQAQLQNR STNKEVQVEQ NPNSMFQKNT GQGRRFGRGQ ESQGGWGLPA
1301: QENMHHHHQR PPSNRDRQKQ NLHYEYKPVG SHTYDGERSR EQSKESSQTE GPRYREKGQG QQRQGGYQQQ RGTSGRNGGH GFTGDRN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.