Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34301 | Canola | nucleus | 95.19 | 95.12 |
| CDX92648 | Canola | nucleus | 70.41 | 69.8 |
| CDY11025 | Canola | nucleus | 69.83 | 68.77 |
| AT4G24680.1 | Thale cress | nucleus | 70.41 | 67.69 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 35.28 | 30.33 |
| KRH57096 | Soybean | mitochondrion, nucleus | 33.67 | 29.35 |
| KRH03258 | Soybean | mitochondrion, nucleus | 33.53 | 29.3 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 30.98 | 27.69 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 24.2 | 22.9 |
| PGSC0003DMT400046782 | Potato | nucleus | 21.87 | 22.74 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 24.05 | 21.94 |
| TraesCS5D01G097200.2 | Wheat | nucleus | 23.91 | 21.61 |
| TraesCS5A01G084800.1 | Wheat | nucleus | 23.76 | 21.45 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 22.96 | 21.23 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 23.76 | 21.14 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 23.18 | 20.99 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 22.38 | 20.44 |
| Zm00001d041592_P002 | Maize | mitochondrion | 22.08 | 20.11 |
| Os11t0689500-01 | Rice | nucleus, plastid | 6.27 | 18.82 |
| TraesCS4A01G172700.2 | Wheat | cytosol | 13.41 | 15.55 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 2.62 | 13.85 |
| TraesCSU01G180900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 11.88 | 13.43 |
| Os11t0689650-00 | Rice | cytosol, mitochondrion, nucleus | 6.2 | 12.27 |
| OQU84043 | Sorghum | mitochondrion, nucleus | 13.85 | 11.93 |
| TraesCSU01G189500.1 | Wheat | cytosol | 8.6 | 11.63 |
| TraesCSU01G181000.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 8.6 | 11.4 |
Protein Annotations
| EnsemblPlants:CDY03428 | EnsemblPlantsGene:GSBRNA2T00116078001 | InterPro:BAT2_N | InterPro:MOS1-like | ncoils:Coil | PANTHER:PTHR34805 |
| PFAM:PF07001 | ProteinID:CDY03428 | ProteinID:CDY03428.1 | SEG:seg | UniParc:UPI0004EC8379 | MapMan:35.1 |
Description
BnaC01g16540D
Coordinates
chrLK031943:-:397413..403631
Molecular Weight (calculated)
148860.0 Da
IEP (calculated)
9.870
GRAVY (calculated)
-1.137
Length
1372 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTSSTTGDRR WGTTRRSGMT ILGKVAVPKP INLPSQRLEN QGLDPNVEIV PKGTLSWGSK SSLNAWGTSS LSPRTESGPG SPSHLSTRPS TGGSVTRPST
0101: ADSDKAHDSS STWDSKSRPS SASGVLPANQ ASVALQRPHS ADTRPGSSHL SRFAEPVSET SATWGQHAPT KKDGFFLTSG DFPSLGAEKE SSEKSSVPQD
0201: AARPASSSGR SVEEREANVR IGDDNTWRRD DQPYSEDAPR HCREAGQLDS RCPQSYPNAN FPHQYDGWRG LPVNNHQGGG WYRGNHPYGA PMGPGGFPID
0301: PFPFYPPQVQ PTPGHEARPR GNHPANGNMF RPPILDSYVH PRMQTRPGFY LGPVPHESYY GPPMGYGSPS NRDLPFAGRP AGPHAYSQHS GQGGYDTSGS
0401: SVGLEQNEPS HPQERQRQYK VLLRAQDGRN GEDETKREGI LGNRLPNAEV VAHQMQNSKN NRRGNNIEAS DEVQPIRAEN AAPEDPSLIQ KIDGLNTKTR
0501: SGDGWQNASS VVNRDQQENK TRTVNSGNSV DKVSGRMPRT GHASDGTNSL HYKHGDLATN KNSELTAISG TSISRRSTQQ TQGRADHQSQ QRVKNEGNDG
0601: WRKTNVMSGS SPATLASNSE SFAEVSVGDS LDTGSVGKPV PGISVDPNDN QRTTMRELAR QRAQERQKEE EERARDQRAK ALAKLEELNR RSQAAEGGSA
0701: KNLEAESNAS IANIPEVPRS LSPARMVAKS TESTEESGKP SMQNAMTSTE DAHYVDPNHQ DNLPRHRDGA ASKQKRLGYK QKQHIVFEKK TAGNSFSEAT
0801: TEVSDVVPFP EVSNQGVISH NSDTLATPSV STEPAFTKRK NNRNGKKKHK VEEAKLMNTT RAAVGKETKS GDESIEIGRV RAPEIKFGSL SDPSLDIKGS
0901: GNSSDQISSS TNEESQSRAK NNSKTQHLRK TPRNTLVNKP ADKFPGNSTV IWAPVHPQQK ADGSGGVGSP VPEFSTSSKS LHQGQTSSRS KRVELERYVA
1001: KPIVKETAEQ MVSKNPVTAA PEMAENVLQK ENCGGGEGKG ILQPPGSPLK SRHGNGRQGK HGRGSAASTK ALEDGQLGTS NQPIRGTVNY HTSNQTGQIA
1101: VDSSKDRTAS STGGWIDGWY MTPETQHSAA TAEEMEASAP RTIAVGKDQG MSIQGKQHAS RSNYGDYKKA NTRDSSKAHM QQSGHGLGQQ DLHVASNEIR
1201: GQSGGCQYSR DRTYASQKRD VAGYEQQGFT PEQKMISADT PEHSQNRSAS QEVGGGHNPN STFQKNAGQN RRFGRGQESH GGWGSSSMQE NMHHHHQRPL
1301: SNRDRQKPNL HYEYKPVGSH AYDGEQLKDS SEGPRYREKG QGNQRHGGQK SYQQQRGSAG RNTGHGLSDE RN
0101: ADSDKAHDSS STWDSKSRPS SASGVLPANQ ASVALQRPHS ADTRPGSSHL SRFAEPVSET SATWGQHAPT KKDGFFLTSG DFPSLGAEKE SSEKSSVPQD
0201: AARPASSSGR SVEEREANVR IGDDNTWRRD DQPYSEDAPR HCREAGQLDS RCPQSYPNAN FPHQYDGWRG LPVNNHQGGG WYRGNHPYGA PMGPGGFPID
0301: PFPFYPPQVQ PTPGHEARPR GNHPANGNMF RPPILDSYVH PRMQTRPGFY LGPVPHESYY GPPMGYGSPS NRDLPFAGRP AGPHAYSQHS GQGGYDTSGS
0401: SVGLEQNEPS HPQERQRQYK VLLRAQDGRN GEDETKREGI LGNRLPNAEV VAHQMQNSKN NRRGNNIEAS DEVQPIRAEN AAPEDPSLIQ KIDGLNTKTR
0501: SGDGWQNASS VVNRDQQENK TRTVNSGNSV DKVSGRMPRT GHASDGTNSL HYKHGDLATN KNSELTAISG TSISRRSTQQ TQGRADHQSQ QRVKNEGNDG
0601: WRKTNVMSGS SPATLASNSE SFAEVSVGDS LDTGSVGKPV PGISVDPNDN QRTTMRELAR QRAQERQKEE EERARDQRAK ALAKLEELNR RSQAAEGGSA
0701: KNLEAESNAS IANIPEVPRS LSPARMVAKS TESTEESGKP SMQNAMTSTE DAHYVDPNHQ DNLPRHRDGA ASKQKRLGYK QKQHIVFEKK TAGNSFSEAT
0801: TEVSDVVPFP EVSNQGVISH NSDTLATPSV STEPAFTKRK NNRNGKKKHK VEEAKLMNTT RAAVGKETKS GDESIEIGRV RAPEIKFGSL SDPSLDIKGS
0901: GNSSDQISSS TNEESQSRAK NNSKTQHLRK TPRNTLVNKP ADKFPGNSTV IWAPVHPQQK ADGSGGVGSP VPEFSTSSKS LHQGQTSSRS KRVELERYVA
1001: KPIVKETAEQ MVSKNPVTAA PEMAENVLQK ENCGGGEGKG ILQPPGSPLK SRHGNGRQGK HGRGSAASTK ALEDGQLGTS NQPIRGTVNY HTSNQTGQIA
1101: VDSSKDRTAS STGGWIDGWY MTPETQHSAA TAEEMEASAP RTIAVGKDQG MSIQGKQHAS RSNYGDYKKA NTRDSSKAHM QQSGHGLGQQ DLHVASNEIR
1201: GQSGGCQYSR DRTYASQKRD VAGYEQQGFT PEQKMISADT PEHSQNRSAS QEVGGGHNPN STFQKNAGQN RRFGRGQESH GGWGSSSMQE NMHHHHQRPL
1301: SNRDRQKPNL HYEYKPVGSH AYDGEQLKDS SEGPRYREKG QGNQRHGGQK SYQQQRGSAG RNTGHGLSDE RN
0001: MTSSTTGDRR WGTTRRSGMT ILGKVAVPKP INLPSQRLEN QGLDPNVEIV PKGTLSWGSK SSLNAWGTSS LSPRTESGPG SPSHLSNRPS SGGSVTRPST
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQD AGPHARPPSS SGRSVEGQGV DCTEEANDRI GDANSWRREN QPYSEDAPRH CREEGQLDSR GSQSYPNANF PPRYDAWRGP PVNNHQGGGW
0301: YGGNHPYGAP MGPGGFHMDP FPFYPTQVPP APGHGAGPRG NHANNERMFR PPMLDSYVHP RMQTRPGFYV GPAPHEGYYG PPMGYGSPSN RDLPFAGRPT
0401: GPHAYNNHSG QGGYDTPGSS VSLERNESSH SQETQRPYKV LLKHQDGRFG EDNAKREEFL GNRLPNAEKI AQQMQTSRNE RREIRNDASG EVQPVKAELA
0501: APGDPSLIQK IEGLNAKTRT NDGWQNSSSV VNRDEQESQP RTLNSGNSAN KVSARNHRTG HASDSKNSSH YNQGDSATNK NAEPAAMGGT SIFRRPTQQT
0601: QGRADPQTKR IVNSEGNDAW QKTTVMSGSS HTTLATNTES FREVNVDDSL DTESIRRPGS GISADPKDNQ RSTMRELARQ RAQQRQKEEE ERARDQRAKA
0701: LAKLEELNRR SQIYEEGSVK NMEAASNASP ADMPTDPGSH SSNATNSVEP TGGSGKNTTQ NTRTSTEYAN NVGPSQQDNL PRDGGASKQK RLGYKQKQNI
0801: IFEKKPTGSS VATAEVFDVV PSPEVVNEGV SSNNSDMPAT STVSAESTFP KRKNNRNGKK KHKAEETATM NTTRVAVGKE TKSGDESIET ARARAAEIEL
0901: GSVSVPSLDI KVSGDSSEQI SSFTNEESQN RAKNNWKSQH VRRTQRNSLV NKPAEKFSGN NAVIWAPVHP QQKADVSTGG GSQTTVPEFG TSSKSQHQGQ
1001: TSSKSKRVEI ERYVPKPIVK EMAEQIVSKN LVTSAPDMSE NVNQKENRGG EGTGILQPSG STAGKSGSPS KSRHGNGRQG KHGREHASWH QRGSGAPTKA
1101: LEDGQFVTSN QPIRGTVNYH SSKQTEQIAA KDQTTCNKDG WNDGWYMTPE THYSAAEEME SSAVGKDQGM SMHGRQHASR SNKDGGSNYG DPKKGNKRDF
1201: NKAHTQHSGH GFSQPDLPAA SKEGRVPGDH VWHTANRTGK YGGRESTRDK PYGSQEKNVV GYEHQGFTTE QKTTSADTQA QLQNRSTNKE VQVEQNPNSM
1301: FQKNTGQGRR FGRGQESQGG WGLPAQENMH HHHQRPPSNR DRQKQNLHYE YKPVGSHTYD GERSREQSKE SSQTEGPRYR EKGQGQQRQG GYQQQRGTSG
1401: RNGGHGFTGD RN
0101: ADSNKAHDSS SSVAWDSNSR PSSASGVFPS NQPSVALQRP HSADTRPGSS QLSRFAEPVS ETSATWGQHV APEKLGVAPS KNDGFSLTSG DFPSLGAEKD
0201: TSEKSTRPQD AGPHARPPSS SGRSVEGQGV DCTEEANDRI GDANSWRREN QPYSEDAPRH CREEGQLDSR GSQSYPNANF PPRYDAWRGP PVNNHQGGGW
0301: YGGNHPYGAP MGPGGFHMDP FPFYPTQVPP APGHGAGPRG NHANNERMFR PPMLDSYVHP RMQTRPGFYV GPAPHEGYYG PPMGYGSPSN RDLPFAGRPT
0401: GPHAYNNHSG QGGYDTPGSS VSLERNESSH SQETQRPYKV LLKHQDGRFG EDNAKREEFL GNRLPNAEKI AQQMQTSRNE RREIRNDASG EVQPVKAELA
0501: APGDPSLIQK IEGLNAKTRT NDGWQNSSSV VNRDEQESQP RTLNSGNSAN KVSARNHRTG HASDSKNSSH YNQGDSATNK NAEPAAMGGT SIFRRPTQQT
0601: QGRADPQTKR IVNSEGNDAW QKTTVMSGSS HTTLATNTES FREVNVDDSL DTESIRRPGS GISADPKDNQ RSTMRELARQ RAQQRQKEEE ERARDQRAKA
0701: LAKLEELNRR SQIYEEGSVK NMEAASNASP ADMPTDPGSH SSNATNSVEP TGGSGKNTTQ NTRTSTEYAN NVGPSQQDNL PRDGGASKQK RLGYKQKQNI
0801: IFEKKPTGSS VATAEVFDVV PSPEVVNEGV SSNNSDMPAT STVSAESTFP KRKNNRNGKK KHKAEETATM NTTRVAVGKE TKSGDESIET ARARAAEIEL
0901: GSVSVPSLDI KVSGDSSEQI SSFTNEESQN RAKNNWKSQH VRRTQRNSLV NKPAEKFSGN NAVIWAPVHP QQKADVSTGG GSQTTVPEFG TSSKSQHQGQ
1001: TSSKSKRVEI ERYVPKPIVK EMAEQIVSKN LVTSAPDMSE NVNQKENRGG EGTGILQPSG STAGKSGSPS KSRHGNGRQG KHGREHASWH QRGSGAPTKA
1101: LEDGQFVTSN QPIRGTVNYH SSKQTEQIAA KDQTTCNKDG WNDGWYMTPE THYSAAEEME SSAVGKDQGM SMHGRQHASR SNKDGGSNYG DPKKGNKRDF
1201: NKAHTQHSGH GFSQPDLPAA SKEGRVPGDH VWHTANRTGK YGGRESTRDK PYGSQEKNVV GYEHQGFTTE QKTTSADTQA QLQNRSTNKE VQVEQNPNSM
1301: FQKNTGQGRR FGRGQESQGG WGLPAQENMH HHHQRPPSNR DRQKQNLHYE YKPVGSHTYD GERSREQSKE SSQTEGPRYR EKGQGQQRQG GYQQQRGTSG
1401: RNGGHGFTGD RN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.