Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004407.1-P | Field mustard | nucleus, plastid | 100.0 | 100.0 |
| CDY01754 | Canola | nucleus, plastid | 97.51 | 96.9 |
| CDY28576 | Canola | nucleus | 88.78 | 89.62 |
| CDY28577 | Canola | cytosol | 67.29 | 88.89 |
| AT1G69690.1 | Thale cress | nucleus, plastid | 86.6 | 85.54 |
| CDY36943 | Canola | nucleus | 28.66 | 48.68 |
| VIT_01s0026g02200.t01 | Wine grape | nucleus | 50.16 | 45.61 |
| CDY24170 | Canola | nucleus | 33.02 | 43.62 |
| KRH45889 | Soybean | nucleus | 38.32 | 43.01 |
| KRG99108 | Soybean | nucleus | 35.83 | 42.12 |
| CDY40752 | Canola | cytosol | 21.81 | 39.55 |
| CDX78335 | Canola | nucleus | 20.87 | 38.07 |
| CDX81094 | Canola | nucleus | 20.87 | 37.22 |
| CDX87179 | Canola | nucleus | 24.3 | 36.28 |
| CDY16842 | Canola | nucleus | 23.99 | 35.81 |
| CDY60249 | Canola | cytosol | 23.05 | 35.58 |
| CDY44770 | Canola | cytosol | 24.3 | 34.67 |
| PGSC0003DMT400008728 | Potato | nucleus | 38.63 | 33.42 |
| Solyc05g007420.1.1 | Tomato | nucleus | 39.56 | 33.16 |
| CDY46951 | Canola | nucleus | 23.36 | 32.61 |
| CDY48964 | Canola | nucleus | 22.12 | 32.27 |
| CDY20065 | Canola | cytosol | 26.79 | 31.97 |
| CDY45760 | Canola | nucleus | 23.99 | 31.82 |
| CDY21536 | Canola | nucleus | 23.36 | 31.78 |
| CDY40799 | Canola | nucleus | 22.74 | 31.74 |
| CDX88010 | Canola | nucleus | 24.61 | 31.23 |
| CDY52403 | Canola | nucleus | 28.35 | 29.84 |
| CDY00171 | Canola | nucleus | 25.55 | 29.71 |
| CDY13675 | Canola | nucleus | 28.66 | 29.58 |
| CDX72856 | Canola | nucleus | 29.91 | 28.74 |
| CDX96370 | Canola | nucleus | 29.59 | 28.36 |
| CDY27099 | Canola | nucleus | 24.61 | 28.32 |
| CDX95656 | Canola | nucleus | 25.23 | 27.65 |
| CDX91612 | Canola | nucleus | 24.3 | 27.08 |
| CDY39914 | Canola | nucleus, plastid | 33.02 | 26.9 |
| CDY71135 | Canola | nucleus | 32.71 | 26.79 |
| CDY53888 | Canola | nucleus | 25.86 | 26.69 |
| CDX82193 | Canola | nucleus, plastid | 28.97 | 26.42 |
| CDY03666 | Canola | nucleus, plastid | 28.97 | 26.2 |
| CDX74756 | Canola | nucleus | 26.17 | 25.85 |
| CDY18910 | Canola | nucleus | 25.86 | 25.54 |
Protein Annotations
| MapMan:15.5.19 | UniProt:A0A078JRL2 | EnsemblPlants:CDY68276 | ProteinID:CDY68276 | ProteinID:CDY68276.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00072750001 | InterPro:IPR017887 | PFAM:PF03634 | PFscan:PS51369 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF40 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0001B3427D | SEG:seg |
Description
BnaAnng26720DBnaAnng26720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRL2]
Coordinates
chrLK037096:-:4072..5218
Molecular Weight (calculated)
34068.0 Da
IEP (calculated)
7.465
GRAVY (calculated)
-0.733
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDPDHHQR PNFPLQLLDS SSSSSTSLAI IPSASSSEPN SDPNVLSKKP PPKRTSTKDR HTKVEGRGRR IRMPAMCAAR VFQLTRELGH KSDGETIEWL
101: LQQAEPAVIA ATGTGTIPAN FTSLNISLRS SRSSLSAAHL RTTPSNYYFH SPAMAQHHHQ QQLHQVRPKN ESDSCSSSQL VDHNQMGNYL VQSTAGSLPT
201: SQTPATAPFW SSGDNTQNLW AFHHSGDVYN TSSGGGGGGG GAGGGGGVHL MNFPAPFALF SGQPLASGYG GGGGGGGEHN HYGVLSALNA AYRPVQETAN
301: QQNHGDHHHN HQEDGSTSHH S
101: LQQAEPAVIA ATGTGTIPAN FTSLNISLRS SRSSLSAAHL RTTPSNYYFH SPAMAQHHHQ QQLHQVRPKN ESDSCSSSQL VDHNQMGNYL VQSTAGSLPT
201: SQTPATAPFW SSGDNTQNLW AFHHSGDVYN TSSGGGGGGG GAGGGGGVHL MNFPAPFALF SGQPLASGYG GGGGGGGEHN HYGVLSALNA AYRPVQETAN
301: QQNHGDHHHN HQEDGSTSHH S
001: MDPDPDHNHR PNFPLQLLDS STSSSSTSLA IISTTSEPNS EPKKPPPKRT STKDRHTKVE GRGRRIRMPA MCAARVFQLT RELGHKSDGE TIEWLLQQAE
101: PAVIAATGTG TIPANFTSLN ISLRSSRSSL SAAHLRTTPS SYYFHSPHQS MTHHLQHQHQ VRPKNESHSS SSSSSQLLDH NQMGNYLVQS TAGSLPTSQS
201: PATAPFWSSG DNTQNLWAFN INPHHSGVVA GDVYNPNSGG SGGGSGVHLM NFAAPIALFS GQPLASGYGG GGGGGGEHSH YGVLAALNAA YRPVAETGNH
301: NNNQQNRDGD HHHNHQEDGS TSHHS
101: PAVIAATGTG TIPANFTSLN ISLRSSRSSL SAAHLRTTPS SYYFHSPHQS MTHHLQHQHQ VRPKNESHSS SSSSSQLLDH NQMGNYLVQS TAGSLPTSQS
201: PATAPFWSSG DNTQNLWAFN INPHHSGVVA GDVYNPNSGG SGGGSGVHLM NFAAPIALFS GQPLASGYGG GGGGGGEHSH YGVLAALNAA YRPVAETGNH
301: NNNQQNRDGD HHHNHQEDGS TSHHS
Arabidopsis Description
TCP15TCP15 [Source:UniProtKB/TrEMBL;Acc:A0A178WLV7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.