Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037488.1-P | Field mustard | cytosol | 62.69 | 100.0 |
| Bra037489.1-P | Field mustard | cytosol | 36.57 | 99.82 |
| CDY00062 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.99 | 91.08 |
| CDX85335 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 96.78 | 89.36 |
| CDY48750 | Canola | cytosol | 31.08 | 88.05 |
| CDY05684 | Canola | cytosol | 30.41 | 87.81 |
| CDY00066 | Canola | cytosol | 30.41 | 85.02 |
| AT5G48385.1 | Thale cress | cytosol | 31.35 | 83.87 |
| KRH66282 | Soybean | cytosol | 22.71 | 62.09 |
| KRH07289 | Soybean | cytosol | 22.64 | 61.9 |
| KRH66280 | Soybean | cytosol | 22.44 | 61.58 |
| VIT_07s0151g00650.t01 | Wine grape | endoplasmic reticulum, extracellular | 22.57 | 59.86 |
| PGSC0003DMT400071153 | Potato | nucleus | 21.84 | 59.82 |
| Solyc06g082930.2.1 | Tomato | nucleus | 21.37 | 59.63 |
| PGSC0003DMT400053214 | Potato | cytosol | 21.3 | 58.24 |
| Solyc06g007640.2.1 | Tomato | nucleus | 20.83 | 58.02 |
| GSMUA_Achr2P05710_001 | Banana | nucleus | 7.1 | 54.64 |
| GSMUA_Achr9P08130_001 | Banana | cytosol | 19.49 | 53.89 |
| GSMUA_Achr8P29000_001 | Banana | nucleus | 19.49 | 53.89 |
| TraesCS5A01G168100.1 | Wheat | cytosol | 18.75 | 51.95 |
| HORVU5Hr1G051330.1 | Barley | cytosol | 18.75 | 51.95 |
| Zm00001d019892_P001 | Maize | nucleus | 14.0 | 51.6 |
| EES02294 | Sorghum | nucleus | 18.49 | 51.49 |
| Zm00001d019890_P001 | Maize | nucleus | 18.29 | 51.12 |
| Zm00001d005107_P001 | Maize | cytosol | 18.29 | 51.12 |
| TraesCS5D01G172300.2 | Wheat | cytosol | 18.89 | 50.9 |
| TraesCS5B01G164900.2 | Wheat | cytosol | 18.75 | 50.54 |
| Os09t0248300-01 | Rice | cytosol | 18.08 | 49.82 |
| GSMUA_Achr3P16830_001 | Banana | endoplasmic reticulum, golgi | 19.36 | 49.15 |
| Os09t0248200-01 | Rice | cytosol | 17.82 | 48.81 |
| CDY55572 | Canola | nucleus | 6.83 | 28.49 |
| CDY67951 | Canola | cytosol | 8.44 | 27.33 |
| CDX69452 | Canola | cytosol | 8.24 | 27.27 |
| CDY12290 | Canola | cytosol | 8.04 | 26.97 |
| CDY46317 | Canola | cytosol, nucleus, plastid | 9.44 | 26.86 |
| CDY34252 | Canola | cytosol, nucleus, plastid | 9.31 | 26.63 |
| CDY67200 | Canola | cytosol, nucleus | 2.34 | 25.0 |
| CDY38318 | Canola | nucleus | 8.57 | 24.11 |
| CDY19713 | Canola | cytosol | 4.55 | 22.37 |
| CDX99994 | Canola | peroxisome | 4.55 | 20.36 |
| CDY05835 | Canola | cytosol, nucleus, plastid | 4.76 | 19.78 |
| CDY38847 | Canola | nucleus, plastid | 6.63 | 16.61 |
| CDY32645 | Canola | nucleus | 6.43 | 16.47 |
| CDX71688 | Canola | nucleus | 6.16 | 15.73 |
| CDX86173 | Canola | cytosol | 6.97 | 12.04 |
| CDX80668 | Canola | cytosol, mitochondrion, plasma membrane | 7.1 | 11.88 |
| CDX99996 | Canola | extracellular | 1.0 | 9.32 |
| CDX99995 | Canola | cytosol, nucleus, peroxisome | 2.14 | 6.68 |
| CDY19712 | Canola | cytosol, nucleus, peroxisome | 2.14 | 6.68 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.6.5.1.5 | GO:A0A078DB71 | EnsemblPlants:CDX86307 | ProteinID:CDX86307 | ProteinID:CDX86307.1 |
| ncoils:Coil | InterPro:Frigida | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051321 | EnsemblPlantsGene:GSBRNA2T00144426001 | InterPro:IPR011990 |
| InterPro:IPR019734 | PFAM:PF07899 | PFAM:PF08631 | PANTHER:PTHR31791 | PANTHER:PTHR31791:SF8 | SMART:SM00028 |
| SUPFAM:SSF48452 | InterPro:Spo22/ZIP4/TEX11 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0004EF3228 | SEG:seg |
Description
BnaA06g30240D
Coordinates
chrLK031845:-:870311..878482
Molecular Weight (calculated)
165235.0 Da
IEP (calculated)
6.698
GRAVY (calculated)
-0.259
Length
1493 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KVSLERLQKK
0101: RDAAVFAINS ALVKYNNPPP ISITSVEDSP NKAFAADGTD ENPDGTVQEA EISPEVKAYP QLLKLCGDMD SAGLHKFVSD NRKNLASLKE EIPAAFKAAA
0201: NPASLVLDSL EGFYPVEAPN GDGKKDGNLL GMRRTCIMLM ECLSVLLSGL DSNSLAVVLS EDVKQRAKSI AEGWSPLLGS LEMDACNGNS LEAHAFLQLL
0301: ASFDIVSGFE EDGILKLIPM VSRRRQAAEL CRSLGLSEKM PGVIEVLLKS GKQIDAVNLA FAFELTEQFP PVELLKSYLT DARRSTSQGG PGNASPAVQA
0401: SDEFNERELT GLKAVAKCVE EHNLEEQYPV EPLQKRILQL EKAKAEKKRA TEPTKPQTKR PRGAQPRVTD NHNNNNNNNK TGYGRVIPER YPQYVYDNRQ
0501: FLNGPIMAAQ APPPPPPQTY TFSPAAAHGN FYGNCYQYQP PPPPSLTPPL LLVYESEMRI AEISTPDYRQ LHRETESHTH HPLLSEIELL IQQSESISKD
0601: QPLPQTLPHS LRQSLTRLSQ LAPLPGNSFK LTIWKLSFRL WNACVDLSNA AALQSSSSSA ESIANLRHAA ADMLFLARDV TGVPSPTIKS SLIYYRTGLV
0701: WHDLKKLDLA SDCFERATEI LSKIDVAKIT DAGERILFLD LNLARSRTAW EISDRNLAVT LLNRAKNMLF GSPDHYKALS NQFLAFGKSA LSREDDDCSL
0801: NDALRLMNES LDLCEKGLGT AKTREDTMEF KSMRVNTLRF ISAVHLQKGE FESVIKCVKV LRSDGADQHA SLPVLAMKAW LGLGKHSEAE KELRSMVGNK
0901: DIPEAVWVSA VEAYFEVVGT AGAETAKGVF LGLLGRCHVS AKTALRVAHR VLGESRGGDS GSRIRANVVA QLVSDERVVA LFAGEAVTNE RKAIHSVLWN
1001: SASAHFGAKD FETSAEMFEK SMLYIPHDIE NRVFRAKGFR VLCLCYLGLS QLDRAHEYIE EAEKLEPNIH CSFLKFKIYL QRKEHSSAIS QIDAMLSCLD
1101: FSPHYLSLAA HEAISCQALS VAVASLSKFL SFYPSGKTMP TTEVVVFRTL VTILTQDAGS ETEALNFMLQ AQSRASKLGT ECFFGSGETG KRELKWFALT
1201: SWNLGSRCGN AKKYELCGEF CRLASDFYSY LDTGESGENT VMILRSLVLG VTAIIALEKQ NKNTLTETQV KLAAELLVRA GKIMSSLLSD GKDCIMEPEL
1301: IFMYTLTAYE IHGRLNNSAF QLLVVKTFAG SKSCNYNYLL QLGIFASQSP RSNPDVSTFA LNECLSALIA SASPDYPTIA LIIRKLIALS SVHKGDTEDG
1401: EAIQKMYKQA YRIMVGLKEG DYPTDEGKWL AMTAWNRAAL PVRLGQLETA KKWLSIGLEI AEKVSGMDTY RACMEDFLGG FQTKVSSEAA DRI
0101: RDAAVFAINS ALVKYNNPPP ISITSVEDSP NKAFAADGTD ENPDGTVQEA EISPEVKAYP QLLKLCGDMD SAGLHKFVSD NRKNLASLKE EIPAAFKAAA
0201: NPASLVLDSL EGFYPVEAPN GDGKKDGNLL GMRRTCIMLM ECLSVLLSGL DSNSLAVVLS EDVKQRAKSI AEGWSPLLGS LEMDACNGNS LEAHAFLQLL
0301: ASFDIVSGFE EDGILKLIPM VSRRRQAAEL CRSLGLSEKM PGVIEVLLKS GKQIDAVNLA FAFELTEQFP PVELLKSYLT DARRSTSQGG PGNASPAVQA
0401: SDEFNERELT GLKAVAKCVE EHNLEEQYPV EPLQKRILQL EKAKAEKKRA TEPTKPQTKR PRGAQPRVTD NHNNNNNNNK TGYGRVIPER YPQYVYDNRQ
0501: FLNGPIMAAQ APPPPPPQTY TFSPAAAHGN FYGNCYQYQP PPPPSLTPPL LLVYESEMRI AEISTPDYRQ LHRETESHTH HPLLSEIELL IQQSESISKD
0601: QPLPQTLPHS LRQSLTRLSQ LAPLPGNSFK LTIWKLSFRL WNACVDLSNA AALQSSSSSA ESIANLRHAA ADMLFLARDV TGVPSPTIKS SLIYYRTGLV
0701: WHDLKKLDLA SDCFERATEI LSKIDVAKIT DAGERILFLD LNLARSRTAW EISDRNLAVT LLNRAKNMLF GSPDHYKALS NQFLAFGKSA LSREDDDCSL
0801: NDALRLMNES LDLCEKGLGT AKTREDTMEF KSMRVNTLRF ISAVHLQKGE FESVIKCVKV LRSDGADQHA SLPVLAMKAW LGLGKHSEAE KELRSMVGNK
0901: DIPEAVWVSA VEAYFEVVGT AGAETAKGVF LGLLGRCHVS AKTALRVAHR VLGESRGGDS GSRIRANVVA QLVSDERVVA LFAGEAVTNE RKAIHSVLWN
1001: SASAHFGAKD FETSAEMFEK SMLYIPHDIE NRVFRAKGFR VLCLCYLGLS QLDRAHEYIE EAEKLEPNIH CSFLKFKIYL QRKEHSSAIS QIDAMLSCLD
1101: FSPHYLSLAA HEAISCQALS VAVASLSKFL SFYPSGKTMP TTEVVVFRTL VTILTQDAGS ETEALNFMLQ AQSRASKLGT ECFFGSGETG KRELKWFALT
1201: SWNLGSRCGN AKKYELCGEF CRLASDFYSY LDTGESGENT VMILRSLVLG VTAIIALEKQ NKNTLTETQV KLAAELLVRA GKIMSSLLSD GKDCIMEPEL
1301: IFMYTLTAYE IHGRLNNSAF QLLVVKTFAG SKSCNYNYLL QLGIFASQSP RSNPDVSTFA LNECLSALIA SASPDYPTIA LIIRKLIALS SVHKGDTEDG
1401: EAIQKMYKQA YRIMVGLKEG DYPTDEGKWL AMTAWNRAAL PVRLGQLETA KKWLSIGLEI AEKVSGMDTY RACMEDFLGG FQTKVSSEAA DRI
001: MRIAEITTPD LRLHHRETDS HTHHPLLSEI ELLIQQSEAI SKDQPLPQSL PISLRQFLTR LSQLAPFPDN SFKLTIWKLS FRLWNACVDL ANAASLQSSL
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA
Arabidopsis Description
ZIP4TPR repeat-containing protein ZIP4 [Source:UniProtKB/Swiss-Prot;Acc:B0M1H3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.