Factsheet for Os09t0248200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0621300-01
Os02t0258300-01
Os03t0411000-01
Os03t0794900-01
Os05t0586400-01
Os06t0206100-01
Os06t0524300-01
Os07t0173200-02
Os11t0104866-00
Os11t0104900-00
Os12t0104766-00
Os12t0104800-01
Os12t0502300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48385.1	Os01t0621300-01	AT1G01440.1	21798944
AT5G48385.1	Os02t0258300-01	AT1G01440.1	21798944
AT5G48385.1	Os05t0586400-01	AT1G01440.1	21798944
AT5G48385.1	Os06t0524300-01	AT1G01440.1	21798944
AT5G48385.1	Os12t0502300-01	AT1G15570.1	21798944
AT5G48385.1	Os11t0104866-00	AT3G08530.1	21798944
AT5G48385.1	Os11t0104900-00	AT3G08530.1	21798944
AT5G48385.1	Os12t0104766-00	AT3G08530.1	21798944
AT5G48385.1	Os12t0104800-01	AT3G08530.1	21798944
AT5G48385.1	Os03t0411000-01	AT3G13990.1	21798944
AT5G48385.1	Os06t0206100-01	AT3G13990.1	21798944
AT5G48385.1	Os03t0794900-01	AT3G22440.1	21798944
AT5G48385.1	Os07t0173200-02	AT3G22440.1	21798944
AT5G48385.1	Os03t0794900-01	AT4G14900.1	21798944
AT5G48385.1	Os07t0173200-02	AT4G14900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0248300-01	Rice	cytosol	91.93	92.44
TraesCS5A01G168100.1	Wheat	cytosol	78.9	79.78
HORVU5Hr1G051330.1	Barley	cytosol	78.9	79.78
TraesCS5D01G172300.2	Wheat	cytosol	78.72	77.44
TraesCS5B01G164900.2	Wheat	cytosol	78.17	76.9
EES02294	Sorghum	nucleus	74.5	75.75
Zm00001d005107_P001	Maize	cytosol	73.58	75.09
Zm00001d019890_P001	Maize	nucleus	71.74	73.22
Zm00001d019892_P001	Maize	nucleus	54.13	72.84
GSMUA_Achr2P05710_001	Banana	nucleus	23.49	65.98
GSMUA_Achr8P29000_001	Banana	nucleus	61.65	62.22
GSMUA_Achr9P08130_001	Banana	cytosol	57.98	58.52
GSMUA_Achr3P16830_001	Banana	endoplasmic reticulum, golgi	62.2	57.65
VIT_07s0151g00650.t01	Wine grape	endoplasmic reticulum, extracellular	55.78	54.0
KRH66282	Soybean	cytosol	53.03	52.93
KRH07289	Soybean	cytosol	52.66	52.56
PGSC0003DMT400053214	Potato	cytosol	52.66	52.56
Solyc06g007640.2.1	Tomato	nucleus	51.56	52.43
KRH66280	Soybean	cytosol	51.93	52.02
Solyc06g082930.2.1	Tomato	nucleus	50.64	51.59
PGSC0003DMT400071153	Potato	nucleus	51.56	51.56
CDY05684	Canola	cytosol	47.71	50.29
Bra020704.1-P	Field mustard	cytosol	47.89	50.29
CDY48750	Canola	cytosol	48.44	50.09
Bra036176.1-P	Field mustard	cytosol	47.16	49.42
Bra037489.1-P	Field mustard	cytosol	48.99	48.81
AT5G48385.1	Thale cress	cytosol	49.54	48.39
CDY00062	Canola	cytosol, mitochondrion, nucleus, plastid	18.9	48.36
CDY00066	Canola	cytosol	47.34	48.31
Os07t0592300-01	Rice	nucleus	34.86	31.25
Os07t0173200-02	Rice	cytosol	26.42	26.97
Os03t0794900-01	Rice	nucleus	24.77	24.55
Os01t0181000-00	Rice	nucleus	22.57	20.67
Os03t0193225-01	Rice	plasma membrane	18.35	19.46
Os03t0851400-01	Rice	extracellular	14.68	18.26
CDX86307	Canola	nucleus	48.81	17.82
CDX85335	Canola	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	49.36	16.64
Bra037488.1-P	Field mustard	cytosol	0.18	0.11

Protein Annotations

MapMan:35.1	EntrezGene:4346500	EMBL:AK103826	ProteinID:BAD19898.1	ProteinID:BAD26002.1	ProteinID:BAT07027.1
ncoils:Coil	ProteinID:EEE69256.1	EMBL:EU847009	InterPro:Frigida	GO:GO:0000003	GO:GO:0007275
GO:GO:0008150	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0030154	EnsemblPlantsGene:Os09g0248200
EnsemblPlants:Os09t0248200-01	PFAM:PF07899	PANTHER:PTHR31791	PANTHER:PTHR31791:SF12	UniProt:Q6K487	UniParc:UPI00003759B9
RefSeq:XP_015611849.1	SEG:seg	:	:	:	:

Description

Similar to ABI3-interacting protein 2. (Os09t0248200-01);Frigida-like family protein. (Os09t0248200-02);Similar to ABI3-interacting protein 2. (Os09t0248200-03)

Coordinates

chr9:-:3660404..3665389

Molecular Weight (calculated)

61108.1 Da

IEP (calculated)

7.032

GRAVY (calculated)

-0.402

Length

545 amino acids

Sequence
(BLAST)

001: MSDMESMATL MESTGSKLQQ LQRAFAELES QSAVSLNLKW KQLEDHFHGL EQSLKKKFDD LKRQEEEFEE TVAKSEQMLE QQEAVVVAKE LTSLEKLQQK
101: RDAALAVIFG KSKLNLSTPL INPISKSVNN NAVFNGNIGG SLSVKWPKPA TAHGAYLQDE NTAVKPRSQL VVLCEEMNVN GLHKFISDNR KDLTSIREEI
201: PVALRGATDP YGLVLASLED FYFGDNLILD GKKDGNLLGV RRTCLMLMES LAQLQTDATT GFISEGQVLT ASIKERAKKI ALEWKSKLDS LDFDASNGNC
301: LEAHAFLQLL ATFGIFAEFA QDELCKLLPS VSRRRQTPEL CRILGLSQNM PGVIGVLVEN GRTIDAINLA YAFELTNQFE PVELLKAYLQ EVKSVPHFKT
401: GKISLQVQNE MNERELSALK AAIKCIEEHK LDEKYPIDLL QKRVIQLEKA KADKRRAVEA AKPQSKRPRA NGSVYAPHTS FPDKSFYQAA PPQRHSYPYE
501: RQYVYGAEAH HHPTMISSAP YGISPAHTTY YGNGYQVQYQ VPYIH

Best Arabidopsis Sequence Match ( AT5G48385.1 )
(BLAST)

001: MEDTRSVASL MDSTSSKIQQ LQKAFAELES QRAVTLNLKW KELEEHFHGL ERSLKRRFHE LEDQEKEYET KTRKAQELLE KKKAAVEAKE KAALERLQKK
101: RDAAMFTINS ALDKYNNAPV SKPSVGERWP QNAVEDSSNV FAADSITDDN PDGIVQDVQI SPVMGNYEVK AYPQLLKLCG DMDSTGLHKF VSDNRKNLAS
201: LKEEIPMAFR AAANPASLVL DSLEGFYPME APTADGKKDA NLLGMRRTCI MLMECLSILL SGLDRNCLAV VLSQNVKHRA KTIAEGWNPL LESLDMDACN
301: GNSLEAHAFL QLLATFAIVA DFKEDELLKL IPMVSRRRQA AELCRSLGLA EKMPGVIEVL VNSGKQIDAV NLAFAFELTE QFSPVSLLKS YLIEARRSSP
401: QGRPGNASPA VQDEFNEREL IGLKTVIKCI EEHSLEEQYP VEPLHKRILQ LEKAKADKKR ATEPMKPQPK RPRGAQPRVT DNNNNINNNK TGYGRVIPER
501: YPQYVYDNRP FLSGPIMAAQ PPPPPPPQTY TFNPAPAHGN FYANCYQYQA PPPPPYFH

Arabidopsis Description

FRL3FRIGIDA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.