Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G021800.1 | Barley | nucleus | 68.68 | 68.34 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 68.56 | 67.56 |
| TraesCS7B01G276600.1 | Wheat | nucleus | 68.93 | 67.51 |
| TraesCS7D01G371500.1 | Wheat | nucleus | 68.19 | 66.87 |
| EER88427 | Sorghum | nucleus | 63.01 | 64.2 |
| Zm00001d046072_P001 | Maize | cytosol | 60.05 | 60.35 |
| Os02t0258300-01 | Rice | nucleus | 56.6 | 54.51 |
| Bra037384.1-P | Field mustard | nucleus | 13.07 | 46.29 |
| KRG99688 | Soybean | cytosol | 3.7 | 44.12 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 35.63 | 38.13 |
| GSMUA_Achr10P... | Banana | nucleus | 34.65 | 37.42 |
| GSMUA_Achr10P... | Banana | nucleus | 36.13 | 37.37 |
| CDX79176 | Canola | cytosol | 5.06 | 36.28 |
| GSMUA_Achr10P... | Banana | cytosol | 34.53 | 36.08 |
| CDY42041 | Canola | cytosol | 24.04 | 30.19 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 31.2 | 29.8 |
| Bra004541.1-P | Field mustard | nucleus | 23.92 | 28.91 |
| CDX80013 | Canola | nucleus | 23.55 | 28.72 |
| CDX71720 | Canola | cytosol | 26.14 | 28.65 |
| CDY11374 | Canola | cytosol | 25.89 | 28.34 |
| Bra007625.1-P | Field mustard | cytosol | 25.65 | 28.07 |
| AT3G61670.1 | Thale cress | nucleus | 27.25 | 27.97 |
| CDY48504 | Canola | nucleus | 19.24 | 27.71 |
| CDY15177 | Canola | nucleus | 18.87 | 27.47 |
| KRH06502 | Soybean | nucleus | 30.21 | 27.47 |
| KRG97141 | Soybean | nucleus | 30.83 | 27.44 |
| KRH68892 | Soybean | nucleus | 30.58 | 27.43 |
| CDY11373 | Canola | cytosol | 24.78 | 27.42 |
| PGSC0003DMT400032053 | Potato | nucleus | 31.94 | 27.38 |
| Bra033264.1-P | Field mustard | nucleus | 19.61 | 27.37 |
| CDX90032 | Canola | nucleus | 18.74 | 27.14 |
| Solyc08g082040.2.1 | Tomato | nucleus | 31.57 | 27.09 |
| AT2G46380.1 | Thale cress | nucleus | 25.65 | 27.08 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 25.89 | 26.89 |
| CDX91876 | Canola | nucleus | 19.24 | 26.71 |
| KRH47938 | Soybean | nucleus | 29.1 | 26.4 |
| CDY67475 | Canola | nucleus | 18.74 | 25.72 |
| CDY07174 | Canola | nucleus | 19.73 | 25.16 |
| AT1G01440.1 | Thale cress | nucleus | 20.59 | 25.15 |
| Bra000943.1-P | Field mustard | nucleus | 18.37 | 24.83 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.85 | 24.2 |
| PGSC0003DMT400000290 | Potato | nucleus | 29.72 | 24.0 |
| AT4G01090.1 | Thale cress | nucleus | 20.1 | 22.83 |
| Os05t0586400-01 | Rice | nucleus | 21.21 | 22.05 |
| Os01t0621300-01 | Rice | nucleus | 21.21 | 21.31 |
Protein Annotations
| EnsemblPlants:Os06t0524300-01 | EnsemblPlantsGene:Os06g0524300 | EntrezGene:4341179 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 |
| PANTHER:PTHR31105:SF7 | PFAM:PF11331 | ProteinID:BAD45677.1 | ProteinID:BAD45831.1 | ProteinID:BAF19671.1 | ProteinID:BAS98024.1 |
| RefSeq:XP_015644521.1 | UniParc:UPI000043A389 | UniProt:Q654D6 | MapMan:35.2 | : | : |
Description
Protein of unknown function DUF3133 domain containing protein. (Os06t0524300-01)
Coordinates
chr6:+:19401016..19406760
Molecular Weight (calculated)
89486.7 Da
IEP (calculated)
7.312
GRAVY (calculated)
-0.698
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDEGAAAA ARIRLVRCPK CDKFLPELPA YSVYVCGGCG AALQAKKKYS AQGSDNSDNG HVKYLEVLES VAEAPEAMDG ATADGRSIPN RISALHSRSV
101: YNHEDNRMAR GPSTSTGEAT IRNDGREAKY MRIRNVENAD MMKSVRGRGI SDISPRSPID GIPPTSYQAE SLVNYQLQSK YRFSNREHAN DRDLDGPSRV
201: RGLEKDRAEL LKMLDELRDQ VQQSCEVTDA PSRSATTNRP ADASSSHGAH DQPNQLRHDP SVLHWNGSHH SPSLNVQSPN IPQVHAPLPT RQNLHGYAEP
301: IPHARASSYH AGAGYPCRNV DNFFFGHHDP DPLLSCHHEG LYHQPVCSCF NCYHREFLPV QGTPLGFTDQ RAPYLMNSYG AYPVEGPLYG QQRYTSRGTN
401: TSLQRNHLRT NVRKKPAQTC EPIAGGAPFT ICYNCYEVLR IPMKHSLLGK EYKLMCGSCS HAILVNLDGS RLNVSEPAPG INLSAALQNG IGDSMRNNGH
501: ANADERLLPQ YCFSNGSHES QEKDLESNSS ESDSKHTPLG TDSENTPQSR DLPSEANVIS HVPSLPHHDR CGFSPSEDSG KGSRSTHSEH EKAILFTESC
601: KRNSIKDVCV ANETQSPVDE FDDTLYAQDM LNLPQNVGHT RSTKAGDSFL TNLIKRSFKM NNGTRNGRAR IFVNGFPISD RAVRKAEKLA GEICPGDYWY
701: DYRAGFWGVM GRPCLGMIPP YIPEFNYPMP KNCGGGNTGI FINGRELHQK DLDLLVSRGL SDSPGRSYIV ENSGKVSDEV SGEELYGLGK LAPTVEKMRR
801: GFGMRVPRII Q
101: YNHEDNRMAR GPSTSTGEAT IRNDGREAKY MRIRNVENAD MMKSVRGRGI SDISPRSPID GIPPTSYQAE SLVNYQLQSK YRFSNREHAN DRDLDGPSRV
201: RGLEKDRAEL LKMLDELRDQ VQQSCEVTDA PSRSATTNRP ADASSSHGAH DQPNQLRHDP SVLHWNGSHH SPSLNVQSPN IPQVHAPLPT RQNLHGYAEP
301: IPHARASSYH AGAGYPCRNV DNFFFGHHDP DPLLSCHHEG LYHQPVCSCF NCYHREFLPV QGTPLGFTDQ RAPYLMNSYG AYPVEGPLYG QQRYTSRGTN
401: TSLQRNHLRT NVRKKPAQTC EPIAGGAPFT ICYNCYEVLR IPMKHSLLGK EYKLMCGSCS HAILVNLDGS RLNVSEPAPG INLSAALQNG IGDSMRNNGH
501: ANADERLLPQ YCFSNGSHES QEKDLESNSS ESDSKHTPLG TDSENTPQSR DLPSEANVIS HVPSLPHHDR CGFSPSEDSG KGSRSTHSEH EKAILFTESC
601: KRNSIKDVCV ANETQSPVDE FDDTLYAQDM LNLPQNVGHT RSTKAGDSFL TNLIKRSFKM NNGTRNGRAR IFVNGFPISD RAVRKAEKLA GEICPGDYWY
701: DYRAGFWGVM GRPCLGMIPP YIPEFNYPMP KNCGGGNTGI FINGRELHQK DLDLLVSRGL SDSPGRSYIV ENSGKVSDEV SGEELYGLGK LAPTVEKMRR
801: GFGMRVPRII Q
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.