Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 10
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G173400.1 Wheat plasma membrane 85.33 84.93
TraesCS4A01G133400.1 Wheat plasma membrane 84.86 84.46
HORVU4Hr1G050770.1 Barley plasma membrane 84.7 84.3
TraesCS4B01G171300.1 Wheat plasma membrane 84.54 84.14
OQU92655 Sorghum plasma membrane 80.6 80.35
Os07t0681100-01 Rice plasma membrane 74.92 74.22
Zm00001d029040_P001 Maize mitochondrion 77.13 67.92
Os01t0819100-01 Rice cytosol, extracellular, plasma membrane 35.49 62.67
GSMUA_Achr3P09720_001 Banana plasma membrane 58.68 62.31
VIT_06s0004g08210.t01 Wine grape plasma membrane 59.94 59.65
PGSC0003DMT400078299 Potato plasma membrane 57.57 58.03
Solyc06g082610.2.1 Tomato plasma membrane 56.78 57.6
VIT_08s0040g00060.t01 Wine grape plasma membrane 57.26 57.26
KRH72840 Soybean nucleus 58.99 57.19
Bra020377.1-P Field mustard plastid 37.85 57.01
KRH17210 Soybean nucleus 58.83 56.95
CDY02808 Canola plastid 37.7 56.77
Os05t0480400-01 Rice plasma membrane 56.62 56.27
KRH00489 Soybean plasma membrane 53.79 56.18
KRH40666 Soybean plasma membrane 53.63 56.01
Solyc09g030450.2.1 Tomato plasma membrane 55.68 55.77
CDX88667 Canola plasma membrane 54.73 55.52
CDY58565 Canola plasma membrane 57.1 55.44
PGSC0003DMT400046218 Potato plasma membrane 56.94 55.37
KRH30670 Soybean plasma membrane 58.52 55.29
KRG98109 Soybean mitochondrion 58.2 55.24
Bra006774.1-P Field mustard plasma membrane 56.62 55.23
AT5G58300.1 Thale cress plasma membrane 56.47 54.74
PGSC0003DMT400013468 Potato plasma membrane 54.42 54.33
CDY32713 Canola plasma membrane 55.36 53.92
CDY27986 Canola plasma membrane 53.47 53.72
Solyc03g095490.2.1 Tomato plastid 53.79 53.7
KRH53701 Soybean plasma membrane 54.1 53.43
CDY35996 Canola plasma membrane 53.15 53.07
KRH64226 Soybean plasma membrane 53.15 52.66
AT3G08680.2 Thale cress plasma membrane 53.15 52.66
CDX70172 Canola plasma membrane 51.42 52.24
Bra009091.1-P Field mustard plasma membrane 51.42 52.24
CDX98821 Canola plasma membrane 51.26 51.75
Bra040054.1-P Field mustard plasma membrane, plastid 52.05 51.72
PGSC0003DMT400070937 Potato plasma membrane 48.27 51.69
Solyc06g048560.1.1 Tomato plasma membrane 47.95 51.26
AT5G05160.1 Thale cress plasma membrane 51.1 50.62
KRH72555 Soybean plasma membrane 51.73 50.62
KRH16952 Soybean plasma membrane 51.73 50.46
Os05t0588300-01 Rice cytosol, mitochondrion 15.14 47.29
Os03t0712400-02 Rice plasma membrane 16.56 46.67
Os01t0133900-00 Rice extracellular 8.99 45.24
Os03t0223000-02 Rice plasma membrane 45.74 42.96
Os01t0607900-01 Rice plasma membrane 44.8 41.52
Os04t0463000-01 Rice plasma membrane 41.96 39.76
Os09t0400500-01 Rice plasma membrane 39.43 38.58
Os08t0427600-00 Rice golgi, plasma membrane 25.39 35.94
Os01t0711200-01 Rice plasma membrane 34.7 33.54
Os12t0145900-01 Rice golgi, plasma membrane 41.48 33.17
Os04t0649700-01 Rice plasma membrane 31.86 28.45
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4332740ProteinID:ABF95778.1
ProteinID:ABF95779.1EMBL:AK103073ProteinID:BAF11933.1ProteinID:BAS84046.1ProteinID:EEE59003.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfEnsemblPlantsGene:Os03g0332900
EnsemblPlants:Os03t0332900-01PFAM:PF00069PFAM:PF08263PRINTS:PR00019ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF2InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q10LW3SUPFAM:SSF52058
SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000DB4611RefSeq:XP_015631741.1RefSeq:XP_015631742.1
RefSeq:XP_015631744.1SEG:seg::::
Description
Protein kinase, core domain containing protein. (Os03t0332900-01)
Coordinates
chr3:+:12288225..12291510
Molecular Weight (calculated)
68987.8 Da
IEP (calculated)
7.275
GRAVY (calculated)
-0.098
Length
634 amino acids
Sequence
(BLAST)
001: MGYKIFEGSL VLLSLLLFTS LAVADIASEK QALLAFASAV YRGNKLNWDV NISLCSWHGV TCSPDRSRIS ALRVPAAGLI GAIPPNTLGR LVSLQVLSLR
101: SNRLIGSIPS DITSLPSLQS IFLQDNELSG DLPSFFSPTL NTIDLSYNSF AGQIPASLQN LTQLSTLNLS KNSLSGPIPD LKLPSLRQLN LSNNELNGSI
201: PPFLQIFSNS SFLGNPGLCG PPLAECSLPS PTSSPESSLP PPSALPHRGK KVGTGSIIAA AVGGFAVFLL AAAIFVVCFS KRKEKKDDGL DNNGKGTDNA
301: RIEKRKEQVS SGVQMAEKNK LVFLDGCSYN FDLEDLLRAS AEVLGKGSYG TAYKAILEDG TIVVVKRLKD VVAGKKEFEQ QMEQIGRVGK HANLVPLRAY
401: YYSKDEKLVV YEYVATGSFS AMLHGIKGIA EKTPLDWNTR MKIILGTARG IAHIHAEGGS KLAHGNIKAT NVLLDQDHNP YVSDYGLSAL MSFPISTSRV
501: VVGYRAPETF ESRKFTHKSD VYSFGVLLME MLTGKAPLQS QGQDDVVDLP RWVHSVVREE WTAEVFDVEL MKYLNIEDEL VQMLQLAMAC TSRSPERRPT
601: MAEVIRMIEE LRQSASESRD SSNENARESN PPSA
Best Arabidopsis Sequence Match ( AT5G58300.2 )
(BLAST)
001: MMQFHFQFYV GPVFTLRPSK GFLSTCLVSF LFVTTTFCSY AIADLNSDRQ ALLAFAASVP HLRRLNWNST NHICKSWVGV TCTSDGTSVH ALRLPGIGLL
101: GPIPPNTLGK LESLRILSLR SNLLSGNLPP DIHSLPSLDY IYLQHNNFSG EVPSFVSRQL NILDLSFNSF TGKIPATFQN LKQLTGLSLQ NNKLSGPVPN
201: LDTVSLRRLN LSNNHLNGSI PSALGGFPSS SFSGNTLLCG LPLQPCATSS PPPSLTPHIS TPPLPPFPHK EGSKRKLHVS TIIPIAAGGA ALLLLITVII
301: LCCCIKKKDK REDSIVKVKT LTEKAKQEFG SGVQEPEKNK LVFFNGCSYN FDLEDLLRAS AEVLGKGSYG TAYKAVLEES TTVVVKRLKE VAAGKREFEQ
401: QMEIISRVGN HPSVVPLRAY YYSKDEKLMV CDYYPAGNLS SLLHGNRGSE KTPLDWDSRV KITLSAAKGI AHLHAAGGPK FSHGNIKSSN VIMKQESDAC
501: ISDFGLTPLM AVPIAPMRGA GYRAPEVMET RKHTHKSDVY SFGVLILEML TGKSPVQSPS RDDMVDLPRW VQSVVREEWT SEVFDIELMR FQNIEEEMVQ
601: MLQIAMACVA QVPEVRPTMD DVVRMIEEIR VSDSETTRPS SDDNSKPKDS NVQV
Arabidopsis Description
Probable inactive receptor kinase At5g58300 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.