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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
MultiLoc:extracellular
Plant-mPloc:nucleus
PProwler:secretory
YLoc:extracellular
 extracellular: 19038476
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G68400.1 Os01t0267900-01 AT2G41090.1 17360592
AT1G68400.1 Os01t0279300-01 AT2G41090.1 17360592
AT1G68400.1 Os01t0810300-01 AT2G41090.1 17360592
AT1G68400.1 Os03t0319300-01 AT2G41090.1 17360592
AT1G68400.1 Os05t0491000-01 AT2G41090.1 17360592
AT1G68400.1 Os05t0491100-01 AT2G41090.1 17360592
AT1G68400.1 Os07t0687200-02 AT2G41090.1 17360592
AT1G68400.1 Os12t0603800-00 AT2G41090.1 17360592
AT1G68400.1 Os01t0267900-01 AT5G21274.1 17360592
AT1G68400.1 Os01t0279300-01 AT5G21274.1 17360592
AT1G68400.1 Os01t0810300-01 AT5G21274.1 17360592
AT1G68400.1 Os03t0319300-01 AT5G21274.1 17360592
AT1G68400.1 Os05t0491000-01 AT5G21274.1 17360592
AT1G68400.1 Os05t0491100-01 AT5G21274.1 17360592
AT1G68400.1 Os07t0687200-02 AT5G21274.1 17360592
AT1G68400.1 Os12t0603800-00 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0588300-01 Rice cytosol, mitochondrion 45.24 28.08
Os03t0712400-02 Rice plasma membrane 43.65 24.44
Bra033940.1-P Field mustard cytosol 57.14 23.92
Zm00001d039967_P001 Maize plasma membrane 90.48 17.19
TraesCS3D01G042500.1 Wheat plasma membrane 88.89 16.69
TraesCS3B01G046700.1 Wheat plasma membrane 88.89 16.67
TraesCS3A01G037200.1 Wheat plasma membrane 88.1 16.52
EES02541 Sorghum plasma membrane 92.06 16.34
Os01t0819100-01 Rice cytosol, extracellular, plasma membrane 43.65 15.32
HORVU3Hr1G007120.2 Barley cytosol, peroxisome 89.68 14.45
PGSC0003DMT400037779 Potato plasma membrane 68.25 12.78
Solyc05g009100.2.1 Tomato plasma membrane 67.46 12.72
VIT_01s0011g03860.t01 Wine grape plasma membrane 67.46 12.67
CDY44903 Canola plasma membrane 57.14 11.94
GSMUA_Achr11P... Banana plasma membrane 49.21 11.92
KRH35919 Soybean plasma membrane 61.9 11.61
GSMUA_Achr8P17920_001 Banana plasma membrane 49.21 11.36
CDX81508 Canola plasma membrane 57.14 11.13
KRG94239 Soybean vacuole 56.35 11.06
AT1G68400.1 Thale cress plasma membrane 57.94 10.9
GSMUA_Achr1P21110_001 Banana plasma membrane 50.79 10.7
KRH38161 Soybean plasma membrane 55.56 10.64
Os03t0332900-01 Rice plasma membrane 45.24 8.99
Os07t0681100-01 Rice plasma membrane 45.24 8.91
Os05t0480400-01 Rice plasma membrane 43.65 8.62
Os01t0711200-01 Rice plasma membrane 44.44 8.54
KRG90862 Soybean mitochondrion 45.24 8.51
Os01t0607900-01 Rice plasma membrane 44.44 8.19
Os04t0463000-01 Rice plasma membrane 42.86 8.07
Os03t0223000-02 Rice plasma membrane 42.86 8.0
Os12t0145900-01 Rice golgi, plasma membrane 48.41 7.69
Os09t0400500-01 Rice plasma membrane 38.1 7.41
Os04t0649700-01 Rice plasma membrane 24.6 4.37
Os08t0427600-00 Rice golgi, plasma membrane 1.59 0.45
Protein Annotations
EnsemblPlants:Os01t0133900-00EnsemblPlantsGene:Os01g0133900Gene3D:1.10.510.10InterPro:Kinase-like_dom_sfPANTHER:PTHR27008PANTHER:PTHR27008:SF44
ProteinID:BAS70247.1SUPFAM:SSF56112UniParc:UPI000393A274UniProt:A0A0P0UYI3MapMan:35.1:
Description
Similar to predicted protein. (Os01t0133900-00)
Coordinates
chr1:+:1869773..1870408
Molecular Weight (calculated)
13500.1 Da
IEP (calculated)
4.033
GRAVY (calculated)
0.017
Length
126 amino acids
Sequence
(BLAST)
001: YAFGVVLLEL LTGRCPGSEL PNGGVVVELP RWVQSVVREE WTSEVFDLEL MKDKGIEEEM VAMLQLALSC ASAAPDQRPK IGYVVKMIEE IRACGEASPS
101: HESMDESSGV SVSDSPAVSE GGAISQ
Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)
001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ
Arabidopsis Description
Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.