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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
plasma membrane: 18260611
extracellular: 24083427
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG36955 Sorghum plasma membrane 82.66 82.79
TraesCS2D01G103800.1 Wheat plasma membrane 82.34 82.73
HORVU2Hr1G017650.1 Barley plasma membrane 82.34 82.73
TraesCS2A01G104100.1 Wheat plasma membrane 82.19 82.45
TraesCS2B01G121100.1 Wheat plasma membrane 81.41 81.66
Zm00001d022432_P001 Maize plasma membrane 78.91 79.4
Os03t0332900-01 Rice plasma membrane 74.22 74.92
GSMUA_Achr3P09720_001 Banana plasma membrane 60.94 65.33
Os01t0819100-01 Rice cytosol, extracellular, plasma membrane 36.09 64.35
VIT_06s0004g08210.t01 Wine grape plasma membrane 61.41 61.7
VIT_08s0040g00060.t01 Wine grape plasma membrane 60.0 60.57
Bra020377.1-P Field mustard plastid 39.22 59.62
CDY02808 Canola plastid 39.06 59.38
PGSC0003DMT400078299 Potato plasma membrane 58.12 59.14
Solyc06g082610.2.1 Tomato plasma membrane 57.19 58.56
Os05t0480400-01 Rice plasma membrane 58.12 58.31
KRG98109 Soybean mitochondrion 60.78 58.23
KRH72840 Soybean nucleus 59.38 58.1
KRH00489 Soybean plasma membrane 55.0 57.99
KRH17210 Soybean nucleus 59.22 57.86
KRH30670 Soybean plasma membrane 60.47 57.68
KRH40666 Soybean plasma membrane 54.53 57.5
CDY32713 Canola plasma membrane 57.81 56.84
CDX88667 Canola plasma membrane 55.47 56.8
Bra006774.1-P Field mustard plasma membrane 57.34 56.46
Solyc09g030450.2.1 Tomato plasma membrane 55.62 56.24
PGSC0003DMT400013468 Potato plasma membrane 55.78 56.22
KRH53701 Soybean plasma membrane 56.25 56.07
Solyc03g095490.2.1 Tomato plastid 55.62 56.06
CDY58565 Canola plasma membrane 57.03 55.9
AT5G58300.1 Thale cress plasma membrane 57.03 55.81
KRH64226 Soybean plasma membrane 55.31 55.31
CDY27986 Canola plasma membrane 53.91 54.68
PGSC0003DMT400046218 Potato plasma membrane 55.62 54.6
CDY35996 Canola plasma membrane 54.06 54.49
AT3G08680.2 Thale cress plasma membrane 53.75 53.75
PGSC0003DMT400070937 Potato plasma membrane 49.69 53.72
CDX70172 Canola plasma membrane 51.56 52.88
Bra009091.1-P Field mustard plasma membrane 51.56 52.88
CDX98821 Canola plasma membrane 51.88 52.87
Bra040054.1-P Field mustard plasma membrane, plastid 52.5 52.66
KRH72555 Soybean plasma membrane 53.28 52.62
Solyc06g048560.1.1 Tomato plasma membrane 48.59 52.45
KRH16952 Soybean plasma membrane 53.12 52.31
AT5G05160.1 Thale cress plasma membrane 52.19 52.19
Os03t0712400-02 Rice plasma membrane 16.72 47.56
Os05t0588300-01 Rice cytosol, mitochondrion 14.84 46.8
Os01t0133900-00 Rice extracellular 8.91 45.24
Os03t0223000-02 Rice plasma membrane 45.0 42.67
Os01t0607900-01 Rice plasma membrane 44.22 41.37
Os04t0463000-01 Rice plasma membrane 42.19 40.36
Os09t0400500-01 Rice plasma membrane 38.44 37.96
Os08t0427600-00 Rice golgi, plasma membrane 24.53 35.04
Os12t0145900-01 Rice golgi, plasma membrane 42.81 34.55
Os01t0711200-01 Rice plasma membrane 34.22 33.38
Os04t0649700-01 Rice plasma membrane 30.94 27.89
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4344301ProteinID:BAC80010.1
ProteinID:BAF22564.1ProteinID:BAT03241.1ncoils:CoilProteinID:EAZ41109.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
EnsemblPlantsGene:Os07g0681100EnsemblPlants:Os07t0681100-01PFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13855
ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF32InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
UniProt:Q7XHW7SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00001B3AEA
RefSeq:XP_015646762.1RefSeq:XP_015646763.1RefSeq:XP_015646764.1RefSeq:XP_015646765.1RefSeq:XP_015646766.1SEG:seg
Description
Similar to Receptor-like protein kinase. (Os07t0681100-01);Similar to Receptor-like protein kinase. (Os07t0681100-02);Similar to Receptor-like protein kinase. (Os07t0681100-03);Similar to Leucine-rich repeat receptor-like protein kinase (Fragment). (Os07t0681100-04)
Coordinates
chr7:-:28863599..28868627
Molecular Weight (calculated)
69763.9 Da
IEP (calculated)
7.848
GRAVY (calculated)
-0.133
Length
640 amino acids
Sequence
(BLAST)
001: MDHLSIRNPL SLLLSLQLSL LLFNPLSVAD LTSEKQALLD FASAVYRGNR LNWSQSTSLC SWHGVKCSGD QSHIFELRVP GAGLIGAIPP NTLGKLDSLQ
101: VLSLRSNRLA GSLPSDVTTL PSLRSIYLQH NNFSGDLPSF LNPNLSVVDL SYNSFTGEIP ISLQNLSQLS VLNLQENSLS GSIPDLKLPS LRLLNLSNND
201: LKGQIPQSLQ TFPNGSFLGN PGLCGPPLAK CLLPDSPTPS PASPSSAPTP MSAHHEKKFG AGFIIAVAVG GFAVLMFVVV VLVVCNSKRK GKKESGVDYK
301: GKGTGVRSEK PKQEFSSGVQ IAEKNKLVFL EGCSYTFDLE DLLRASAEVL GKGSYGTAYK AILEDGTVVV VKRLKDVVAG KKEFEQQMEL IGRLGKHANL
401: VPLRAYYYSK DEKLIVYDYL TNGSFSTKLH GIRGVTEKTP LDWSTRVKII LGTAYGIAHV HAEGGAKLTH GNIKSTNILL DQDYSSYVSD YGLTALMSVP
501: ANASRVVVGY RAPETIENRK ITQKSDVYSF GVLLMEMLTG KAPLQSQGND DVVDLPRWVH SVVREEWTAE VFDVELIKQQ NIEEELVQML QIAMACTSRS
601: PDRRPSMEDV IRMIEGLRHS ASESRASSDE KMKDSNPPSV
Best Arabidopsis Sequence Match ( AT5G58300.2 )
(BLAST)
001: MMQFHFQFYV GPVFTLRPSK GFLSTCLVSF LFVTTTFCSY AIADLNSDRQ ALLAFAASVP HLRRLNWNST NHICKSWVGV TCTSDGTSVH ALRLPGIGLL
101: GPIPPNTLGK LESLRILSLR SNLLSGNLPP DIHSLPSLDY IYLQHNNFSG EVPSFVSRQL NILDLSFNSF TGKIPATFQN LKQLTGLSLQ NNKLSGPVPN
201: LDTVSLRRLN LSNNHLNGSI PSALGGFPSS SFSGNTLLCG LPLQPCATSS PPPSLTPHIS TPPLPPFPHK EGSKRKLHVS TIIPIAAGGA ALLLLITVII
301: LCCCIKKKDK REDSIVKVKT LTEKAKQEFG SGVQEPEKNK LVFFNGCSYN FDLEDLLRAS AEVLGKGSYG TAYKAVLEES TTVVVKRLKE VAAGKREFEQ
401: QMEIISRVGN HPSVVPLRAY YYSKDEKLMV CDYYPAGNLS SLLHGNRGSE KTPLDWDSRV KITLSAAKGI AHLHAAGGPK FSHGNIKSSN VIMKQESDAC
501: ISDFGLTPLM AVPIAPMRGA GYRAPEVMET RKHTHKSDVY SFGVLILEML TGKSPVQSPS RDDMVDLPRW VQSVVREEWT SEVFDIELMR FQNIEEEMVQ
601: MLQIAMACVA QVPEVRPTMD DVVRMIEEIR VSDSETTRPS SDDNSKPKDS NVQV
Arabidopsis Description
Probable inactive receptor kinase At5g58300 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.