Factsheet for GSMUA_Achr3P09720_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0681100-01	Rice	plasma membrane	65.33	60.94
VIT_06s0004g08210.t01	Wine grape	plasma membrane	64.99	60.91
KXG36955	Sorghum	plasma membrane	64.15	59.94
Bra020377.1-P	Field mustard	plastid	42.04	59.62
CDY02808	Canola	plastid	42.04	59.62
GSMUA_Achr6P25170_001	Banana	plasma membrane	50.92	59.49
GSMUA_Achr7P21970_001	Banana	plasma membrane	50.75	58.72
Os03t0332900-01	Rice	plasma membrane	62.31	58.68
Zm00001d022432_P001	Maize	plasma membrane	62.48	58.65
TraesCS4D01G173400.1	Wheat	plasma membrane	62.48	58.56
TraesCS4A01G133400.1	Wheat	plasma membrane	62.31	58.4
HORVU2Hr1G017650.1	Barley	plasma membrane	62.31	58.4
PGSC0003DMT400078299	Potato	plasma membrane	61.47	58.35
TraesCS2B01G121100.1	Wheat	plasma membrane	62.31	58.31
TraesCS2A01G104100.1	Wheat	plasma membrane	62.31	58.31
TraesCS2D01G103800.1	Wheat	plasma membrane	62.14	58.24
HORVU4Hr1G050770.1	Barley	plasma membrane	61.98	58.08
Solyc06g082610.2.1	Tomato	plasma membrane	60.64	57.92
TraesCS4B01G171300.1	Wheat	plasma membrane	61.64	57.77
GSMUA_AchrUn_...	Banana	plasma membrane	47.24	57.67
KRH17210	Soybean	nucleus	63.15	57.56
KRH72840	Soybean	nucleus	62.81	57.34
VIT_08s0040g00060.t01	Wine grape	plasma membrane	60.64	57.1
OQU92655	Sorghum	plasma membrane	60.47	56.76
KRG98109	Soybean	mitochondrion	62.98	56.29
CDX88667	Canola	plasma membrane	58.79	56.16
KRH30670	Soybean	plasma membrane	62.98	56.04
KRH00489	Soybean	plasma membrane	56.78	55.85
Bra006774.1-P	Field mustard	plasma membrane	60.64	55.69
Solyc09g030450.2.1	Tomato	plasma membrane	58.79	55.45
PGSC0003DMT400013468	Potato	plasma membrane	58.96	55.43
KRH40666	Soybean	plasma membrane	56.28	55.35
CDY32713	Canola	plasma membrane	59.8	54.84
CDY58565	Canola	plasma membrane	59.97	54.82
Solyc03g095490.2.1	Tomato	plastid	58.12	54.65
AT5G58300.1	Thale cress	plasma membrane	59.3	54.13
PGSC0003DMT400046218	Potato	plasma membrane	58.96	53.99
KRH53701	Soybean	plasma membrane	57.79	53.74
KRH64226	Soybean	plasma membrane	57.12	53.28
AT3G08680.2	Thale cress	plasma membrane	56.95	53.12
CDY35996	Canola	plasma membrane	56.28	52.91
CDY27986	Canola	plasma membrane	55.78	52.77
PGSC0003DMT400070937	Potato	plasma membrane	51.59	52.03
Bra040054.1-P	Field mustard	plasma membrane, plastid	55.28	51.72
Solyc06g048560.1.1	Tomato	plasma membrane	51.26	51.6
KRH72555	Soybean	plasma membrane	55.44	51.08
CDX98821	Canola	plasma membrane	52.93	50.32
KRH16952	Soybean	plasma membrane	54.77	50.31
CDX70172	Canola	plasma membrane	52.43	50.16
Bra009091.1-P	Field mustard	plasma membrane	52.43	50.16
AT5G05160.1	Thale cress	plasma membrane	53.6	50.0
Zm00001d029040_P001	Maize	mitochondrion	59.46	49.31
GSMUA_Achr4P08980_001	Banana	plasma membrane	40.7	49.09
GSMUA_Achr8P19840_001	Banana	plasma membrane	39.03	48.74
GSMUA_Achr3P02160_001	Banana	plasma membrane	37.69	46.78
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	41.21	46.33
GSMUA_Achr9P15690_001	Banana	plasma membrane	42.88	45.71
GSMUA_Achr3P07440_001	Banana	plasma membrane	39.36	45.37
GSMUA_Achr5P06820_001	Banana	plasma membrane	43.55	44.83
GSMUA_Achr6P05910_001	Banana	extracellular, plasma membrane, vacuole	42.04	44.58
GSMUA_Achr10P...	Banana	plasma membrane	42.38	43.92
GSMUA_Achr10P...	Banana	plasma membrane	38.86	43.77
GSMUA_Achr8P23000_001	Banana	plasma membrane	40.37	43.66
GSMUA_Achr5P09830_001	Banana	plasma membrane	42.55	42.98
GSMUA_Achr2P21610_001	Banana	plasma membrane	43.38	42.81
GSMUA_Achr7P14210_001	Banana	plasma membrane	40.03	42.38
GSMUA_Achr11P...	Banana	plasma membrane	58.46	42.2
GSMUA_Achr7P11160_001	Banana	plasma membrane	37.35	41.76
GSMUA_Achr8P17920_001	Banana	plasma membrane	36.52	39.93
GSMUA_Achr11P...	Banana	plasma membrane	34.17	39.23
GSMUA_Achr1P21110_001	Banana	plasma membrane	38.69	38.63
GSMUA_Achr4P09880_001	Banana	plasma membrane	35.18	34.77
GSMUA_Achr1P17850_001	Banana	plasma membrane	30.99	33.95
GSMUA_Achr3P14030_001	Banana	plasma membrane	35.34	33.65
GSMUA_Achr7P20790_001	Banana	plasma membrane	33.0	33.56
GSMUA_Achr10P...	Banana	golgi, plasma membrane	34.51	32.04
GSMUA_Achr9P25250_001	Banana	plastid	33.0	30.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G09720_001	EnsemblPlants:GSMUA_Achr3P09720_001
EnsemblPlants:GSMUA_Achr3T09720_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0SD89	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF112	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295959B	SEG:seg

Description

Probable inactive receptor kinase At5g58300 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09720_001]

Coordinates

chr3:+:7047297..7050611

Molecular Weight (calculated)

66110.5 Da

IEP (calculated)

8.657

GRAVY (calculated)

-0.225

Length

597 amino acids

Sequence
(BLAST)

001: MDQPKHRCFS FASLPVLVIV LFFLSAVTAD LSSDKQVLIA FANSIHHSSK LKWNSNNSIC STWVGVTCSL DRTHVLALRL PGIGLYGSIP ANTLGKLDHL
101: RFLYLQHNSF SGELPTSLPS ALESLDLSYN FLTGEIPTRI QNLSQLSVLN LQNNLFSGPI PDLKLPKLKH LNFSDNNLNG SIPFSLQRFP NGSFTGNPHL
201: CGPRLPQCAA KSSRKKTNSG LIIAIAAGGL AVLLLFAILL FVCFFKRKER KSGGDSKEKS SGGGRGEKPK EEYSSGVQAA ERNKLVYFEG CTYNFDLEDL
301: LQASAEVLGK GSYGTAYKAS LEDGMTVVVK RLKEVVVGKK EFEQQMEMIE TVGQHPNLNP LRAYYYSKDE KLLVYDYVPT GSFSALLHGN RGTDRPALDW
401: DSRVKIILGT AYGIAHIHSK GGAKLAHGNI KSSNILLNQD LKPVVSDYGL MVLMNLPAKP SRIVVGYRAP ETIEARKITQ KSDIYSFGVL LLEMLTGKAP
501: LQSQGHDDVV DLPRWVQSVV REEWTAEVFD RELMGSQNTE EEMVQMLQIA MACVARVPDR RPRIEEVIQR IEEIRQSGSE SRPSSEDRHK DSNVQTP

Best Arabidopsis Sequence Match ( AT5G58300.2 )
(BLAST)

001: MMQFHFQFYV GPVFTLRPSK GFLSTCLVSF LFVTTTFCSY AIADLNSDRQ ALLAFAASVP HLRRLNWNST NHICKSWVGV TCTSDGTSVH ALRLPGIGLL
101: GPIPPNTLGK LESLRILSLR SNLLSGNLPP DIHSLPSLDY IYLQHNNFSG EVPSFVSRQL NILDLSFNSF TGKIPATFQN LKQLTGLSLQ NNKLSGPVPN
201: LDTVSLRRLN LSNNHLNGSI PSALGGFPSS SFSGNTLLCG LPLQPCATSS PPPSLTPHIS TPPLPPFPHK EGSKRKLHVS TIIPIAAGGA ALLLLITVII
301: LCCCIKKKDK REDSIVKVKT LTEKAKQEFG SGVQEPEKNK LVFFNGCSYN FDLEDLLRAS AEVLGKGSYG TAYKAVLEES TTVVVKRLKE VAAGKREFEQ
401: QMEIISRVGN HPSVVPLRAY YYSKDEKLMV CDYYPAGNLS SLLHGNRGSE KTPLDWDSRV KITLSAAKGI AHLHAAGGPK FSHGNIKSSN VIMKQESDAC
501: ISDFGLTPLM AVPIAPMRGA GYRAPEVMET RKHTHKSDVY SFGVLILEML TGKSPVQSPS RDDMVDLPRW VQSVVREEWT SEVFDIELMR FQNIEEEMVQ
601: MLQIAMACVA QVPEVRPTMD DVVRMIEEIR VSDSETTRPS SDDNSKPKDS NVQV

Arabidopsis Description

Probable inactive receptor kinase At5g58300 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.