Factsheet for GSMUA_Achr6P05910_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P25150_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P12330_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P20760_001
GSMUA_Achr6P23670_001
GSMUA_Achr7P22880_001
GSMUA_Achr8P00370_001
GSMUA_Achr8P05790_001
GSMUA_Achr8P08600_001
GSMUA_Achr9P17280_001
GSMUA_Achr9P27220_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48480.1	GSMUA_Achr9P27220_001	AT3G17950.1	15618630
AT1G48480.1	GSMUA_Achr10P...	AT3G27210.1	15618630
AT1G48480.1	GSMUA_Achr5P25150_001	AT3G27210.1	15618630
AT1G48480.1	GSMUA_Achr6P12330_001	AT3G27210.1	15618630
AT1G48480.1	GSMUA_Achr6P20760_001	AT3G27210.1	15618630
AT1G48480.1	GSMUA_Achr7P22880_001	AT3G27210.1	15618630
AT1G48480.1	GSMUA_AchrUn_...	AT3G27210.1	15618630
AT3G02880.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT3G02880.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT3G02880.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592
AT3G17840.1	GSMUA_Achr9P27220_001	AT3G17950.1	15618630
AT3G17840.1	GSMUA_Achr10P...	AT3G27210.1	15618630
AT3G17840.1	GSMUA_Achr5P25150_001	AT3G27210.1	15618630
AT3G17840.1	GSMUA_Achr6P12330_001	AT3G27210.1	15618630
AT3G17840.1	GSMUA_Achr6P20760_001	AT3G27210.1	15618630
AT3G17840.1	GSMUA_Achr7P22880_001	AT3G27210.1	15618630
AT3G17840.1	GSMUA_AchrUn_...	AT3G27210.1	15618630
AT3G17840.1	GSMUA_Achr11P...	AT5G19140.1	15618630
AT3G17840.1	GSMUA_Achr8P00370_001	AT5G19140.1	15618630
AT3G17840.1	GSMUA_Achr8P08600_001	AT5G19140.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plasma membrane	74.25	72.57
GSMUA_Achr7P11160_001	Banana	plasma membrane	66.79	70.41
GSMUA_Achr3P02160_001	Banana	plasma membrane	53.11	62.16
GSMUA_Achr2P21610_001	Banana	plasma membrane	63.94	59.5
GSMUA_Achr3P07440_001	Banana	plasma membrane	53.29	57.92
PGSC0003DMT400036789	Potato	cytosol	32.68	57.32
VIT_14s0006g01080.t01	Wine grape	plasma membrane	59.68	52.58
GSMUA_Achr9P15690_001	Banana	plasma membrane	51.51	51.79
GSMUA_Achr8P23000_001	Banana	plasma membrane	49.73	50.72
KRH60559	Soybean	endoplasmic reticulum	58.79	50.46
EER95247	Sorghum	plasma membrane	60.21	50.3
KRH41871	Soybean	endoplasmic reticulum	57.9	50.23
Zm00001d048053_P001	Maize	plasma membrane	59.68	50.22
Os03t0223000-02	Rice	plasma membrane	60.04	50.07
Zm00001d048054_P002	Maize	mitochondrion, plasma membrane	59.33	49.7
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	46.71	49.53
VIT_17s0000g02010.t01	Wine grape	plasma membrane	58.79	49.26
TraesCS4D01G241100.1	Wheat	plasma membrane	58.44	48.89
Solyc11g011020.1.1	Tomato	nucleus	55.59	48.75
PGSC0003DMT400040459	Potato	plasma membrane	55.77	48.53
GSMUA_AchrUn_...	Banana	plasma membrane	41.92	48.26
TraesCS4A01G064200.1	Wheat	plasma membrane	58.44	48.24
KRH17350	Soybean	extracellular	53.46	48.24
CDX92167	Canola	plasma membrane	52.4	47.28
CDY67567	Canola	plasma membrane	48.85	47.17
Solyc06g068910.2.1	Tomato	plasma membrane	53.11	47.16
PGSC0003DMT400074103	Potato	plasma membrane	54.17	47.07
CDX95816	Canola	plasma membrane	49.2	46.95
AT3G17840.1	Thale cress	plasma membrane	53.46	46.52
CDY61284	Canola	plasma membrane	52.22	46.52
Bra014140.1-P	Field mustard	plasma membrane	52.58	46.4
Solyc03g118510.2.1	Tomato	nucleus	54.35	46.29
Bra022250.1-P	Field mustard	plasma membrane	51.87	46.28
AT1G48480.1	Thale cress	plasma membrane	53.82	46.26
KRH72980	Soybean	extracellular	50.09	46.08
CDY41827	Canola	plasma membrane	52.93	46.06
Bra021277.1-P	Field mustard	plasma membrane	51.69	46.04
TraesCS4B01G241500.1	Wheat	plasma membrane	51.51	46.03
CDX77309	Canola	plasma membrane	52.75	45.98
GSMUA_Achr7P21970_001	Banana	plasma membrane	42.1	45.93
CDY28719	Canola	plasma membrane	49.2	45.86
KRH48661	Soybean	nucleus	54.71	45.03
GSMUA_Achr4P08980_001	Banana	plasma membrane	39.43	44.85
Bra021408.1-P	Field mustard	plasma membrane	48.49	44.83
CDY51524	Canola	plasma membrane	49.2	44.68
Bra023574.1-P	Field mustard	plasma membrane	48.49	44.54
CDX85498	Canola	plasma membrane	48.49	44.54
CDY38103	Canola	plasma membrane	48.49	44.54
Bra040609.1-P	Field mustard	plasma membrane	49.2	44.46
CDY49655	Canola	plasma membrane	48.49	44.25
Bra008611.1-P	Field mustard	plasma membrane	48.31	44.08
AT3G02880.1	Thale cress	plasma membrane	48.85	43.86
CDX69441	Canola	plasma membrane	48.13	43.85
AT5G16590.1	Thale cress	plasma membrane	48.49	43.68
KRH39040	Soybean	plasma membrane	50.44	43.43
GSMUA_Achr5P09830_001	Banana	plasma membrane	45.29	43.15
GSMUA_Achr6P25170_001	Banana	plasma membrane	38.9	42.86
HORVU4Hr1G066900.1	Barley	plasma membrane	40.5	42.54
Os04t0463000-01	Rice	plasma membrane	50.09	42.15
TraesCS2B01G344900.1	Wheat	plasma membrane	49.91	42.13
GSMUA_Achr3P09720_001	Banana	plasma membrane	44.58	42.04
KXG26481	Sorghum	plasma membrane	50.09	41.96
TraesCS2A01G337000.1	Wheat	plasma membrane	49.73	41.85
TraesCS2D01G325900.1	Wheat	plasma membrane	49.73	41.85
Zm00001d003399_P001	Maize	mitochondrion, plasma membrane	49.38	41.06
Os09t0400500-01	Rice	plasma membrane	46.71	40.59
TraesCS5D01G210800.1	Wheat	plasma membrane	46.36	40.28
TraesCS5A01G205500.1	Wheat	plasma membrane	46.54	40.25
GSMUA_Achr11P...	Banana	plasma membrane	36.94	40.0
TraesCS7A01G214300.1	Wheat	plasma membrane	45.29	39.78
TraesCS5B01G202900.1	Wheat	plasma membrane	46.0	39.66
TraesCS7D01G216400.1	Wheat	plasma membrane	45.12	39.63
Zm00001d020403_P001	Maize	plasma membrane	44.94	39.47
TraesCS7B01G121600.1	Wheat	plasma membrane	44.58	39.16
Os08t0427600-00	Rice	golgi, plasma membrane	31.08	39.06
GSMUA_Achr8P17920_001	Banana	plasma membrane	37.66	38.83
HORVU7Hr1G043470.2	Barley	plasma membrane	43.87	38.59
EES15012	Sorghum	plasma membrane	44.58	38.32
KXG35590	Sorghum	plasma membrane	44.41	38.28
GSMUA_Achr8P19840_001	Banana	plasma membrane	31.97	37.66
HORVU0Hr1G012920.2	Barley	cytosol	34.1	37.65
GSMUA_Achr1P21110_001	Banana	plasma membrane	39.96	37.63
HORVU2Hr1G080770.4	Barley	mitochondrion, plasma membrane, plastid	41.03	37.62
Zm00001d032244_P001	Maize	plasma membrane	43.87	36.81
Zm00001d050355_P001	Maize	plasma membrane	44.05	35.68
GSMUA_Achr5P06820_001	Banana	plasma membrane	36.41	35.34
GSMUA_Achr10P...	Banana	plasma membrane	32.68	34.72
GSMUA_Achr1P17850_001	Banana	plasma membrane	33.04	34.13
GSMUA_Achr7P20790_001	Banana	plasma membrane	33.75	32.37
GSMUA_Achr7P14210_001	Banana	plasma membrane	32.15	32.09
GSMUA_Achr4P09880_001	Banana	plasma membrane	34.1	31.79
GSMUA_Achr11P...	Banana	plasma membrane	46.18	31.44
GSMUA_Achr3P14030_001	Banana	plasma membrane	34.99	31.42
GSMUA_Achr10P...	Banana	golgi, plasma membrane	33.39	29.24
GSMUA_Achr9P25250_001	Banana	plastid	31.97	27.86

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G05910_001	EnsemblPlants:GSMUA_Achr6P05910_001	EnsemblPlants:GSMUA_Achr6T05910_001
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_4
UniProt:M0T4I9	PFAM:PF00069	PFAM:PF08263	PFAM:PF12799	ScanProsite:PS00107	PFscan:PS50011
PANTHER:PTHR27008	PANTHER:PTHR27008:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	UniParc:UPI000295E680	SEG:seg	:	:	:

Description

Putative Probable inactive receptor kinase RLK902 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05910_001]

Coordinates

chr6:+:3990110..3993398

Molecular Weight (calculated)

60570.7 Da

IEP (calculated)

7.462

GRAVY (calculated)

-0.127

Length

563 amino acids

Sequence
(BLAST)

001: MASPLLLLLA GAVLLLTSHP GGATDLGSDT AALLAFRDSV GRLALPSWNA NSPGAPCSWQ GVACESGRVG CLRLPGAGLI GRIPAAVGNL TSLRTLSLRF
101: NALSGPLPPE LASLDALRNL YLQGNRLSGD IPGFLSSLKN LVRLNLAGNQ FTGGIPLELN NLTRLGTLFL DNNQLTGGIP DLDLSNLVRF NVSYNQLNGS
201: IPARLRSQPA SAFLATGLCG GPLGPEKKKN KNKLSGGAIA GRGIRVQGNE EQTATALRRL QWMQRRFDLE DLLRASAEVL GKGTFGTTYK AVLETGITVA
301: VKRLKDVNLQ EQEFKEKMEA IGAMDHPNVV PLMAYYFSKD EKLLVYDYVP MGSLSALLHG NRGSGRTSFN WVTRIGIGLS AARGIEYIHS TGPSSSHGNI
401: KSSNILLTKP YEARVSDHGL ALLMGSASTT TRIAGYRAPE LLTGKAPAQA LLNDEGIDLP IWVQSVVREE WTAEVFDVEL LRYQSVEEDM VQLLQLAIEC
501: VARFPDKRPC MAEVVIRISE IIKSSRGSSY QDQQSSPQSI DDGDDQASRQ YDPVNVPNPP GDE

Best Arabidopsis Sequence Match ( AT3G17840.1 )
(BLAST)

001: MRLFFTPSMS NLSIFFSILL LSLPLPSIGD LAADKSALLS FRSAVGGRTL LWDVKQTSPC NWTGVLCDGG RVTALRLPGE TLSGHIPEGI FGNLTQLRTL
101: SLRLNGLTGS LPLDLGSCSD LRRLYLQGNR FSGEIPEVLF SLSNLVRLNL AENEFSGEIS SGFKNLTRLK TLYLENNKLS GSLLDLDLSL DQFNVSNNLL
201: NGSIPKSLQK FDSDSFVGTS LCGKPLVVCS NEGTVPSQPI SVGNIPGTVE GSEEKKKRKK LSGGAIAGIV IGCVVGLSLI VMILMVLFRK KGNERTRAID
301: LATIKHHEVE IPGEKAAVEA PENRSYVNEY SPSAVKAVEV NSSGMKKLVF FGNATKVFDL EDLLRASAEV LGKGTFGTAY KAVLDAVTLV AVKRLKDVTM
401: ADREFKEKIE VVGAMDHENL VPLRAYYYSG DEKLLVYDFM PMGSLSALLH GNKGAGRPPL NWEVRSGIAL GAARGLDYLH SQDPLSSHGN VKSSNILLTN
501: SHDARVSDFG LAQLVSASST TPNRATGYRA PEVTDPRRVS QKADVYSFGV VLLELLTGKA PSNSVMNEEG MDLARWVHSV AREEWRNEVF DSELMSIETV
601: VSVEEEMAEM LQLGIDCTEQ HPDKRPVMVE VVRRIQELRQ SGADRVG

Arabidopsis Description

RLK902Probable inactive receptor kinase RLK902 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVI6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.