CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88180
EER93269
EES01631
EES01966
EES05571
EES09201
EES09256
EES12001
EES16322
KXG22952
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48480.1	EER88180	AT3G17950.1	15618630
AT1G48480.1	EES05571	AT3G17950.1	15618630
AT1G48480.1	EES01966	AT3G27210.1	15618630
AT1G48480.1	EES12001	AT3G27210.1	15618630
AT3G02880.1	EES01631	AT2G41090.1	17360592
AT3G02880.1	EES09201	AT2G41090.1	17360592
AT3G02880.1	EES16322	AT2G41090.1	17360592
AT3G02880.1	OQU78227	AT2G41090.1	17360592
AT3G02880.1	EES01631	AT5G21274.1	17360592
AT3G02880.1	EES09201	AT5G21274.1	17360592
AT3G02880.1	EES16322	AT5G21274.1	17360592
AT3G02880.1	OQU78227	AT5G21274.1	17360592
AT3G17840.1	EER88180	AT3G17950.1	15618630
AT3G17840.1	EES05571	AT3G17950.1	15618630
AT3G17840.1	EES01966	AT3G27210.1	15618630
AT3G17840.1	EES12001	AT3G27210.1	15618630
AT3G17840.1	EER93269	AT3G51310.1	15618630
AT3G17840.1	EES09256	AT5G19140.1	15618630
AT3G17840.1	KXG22952	AT5G19140.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032244_P001	Maize	plasma membrane	84.58	82.56
Zm00001d050355_P001	Maize	plasma membrane	83.97	79.14
TraesCS7D01G216400.1	Wheat	plasma membrane	66.26	67.71
TraesCS7A01G214300.1	Wheat	plasma membrane	66.11	67.55
TraesCS7B01G121600.1	Wheat	plasma membrane	65.8	67.24
HORVU7Hr1G043470.2	Barley	plasma membrane	65.34	66.88
Os08t0427600-00	Rice	golgi, plasma membrane	43.05	62.95
KXG35590	Sorghum	plasma membrane	54.2	54.36
PGSC0003DMT400036789	Potato	cytosol	24.58	50.16
GSMUA_Achr3P02160_001	Banana	plasma membrane	34.81	47.4
VIT_14s0006g01080.t01	Wine grape	plasma membrane	43.97	45.07
GSMUA_Achr6P05910_001	Banana	extracellular, plasma membrane, vacuole	38.32	44.58
Bra021277.1-P	Field mustard	plasma membrane	42.75	44.3
CDY61284	Canola	plasma membrane	42.75	44.3
CDY67567	Canola	plasma membrane	39.39	44.25
GSMUA_Achr2P21610_001	Banana	plasma membrane	40.76	44.13
GSMUA_Achr10P...	Banana	plasma membrane	38.78	44.1
CDX95816	Canola	plasma membrane	39.54	43.9
CDX92167	Canola	plasma membrane	41.68	43.75
VIT_17s0000g02010.t01	Wine grape	plasma membrane	44.43	43.3
AT3G17840.1	Thale cress	plasma membrane	42.44	42.97
Bra022250.1-P	Field mustard	plasma membrane	41.37	42.95
Bra014140.1-P	Field mustard	plasma membrane	41.83	42.95
Solyc11g011020.1.1	Tomato	nucleus	41.98	42.83
CDY41827	Canola	plasma membrane	42.14	42.66
EER95247	Sorghum	plasma membrane	43.82	42.58
KRH41871	Soybean	endoplasmic reticulum	42.14	42.53
PGSC0003DMT400040459	Potato	plasma membrane	41.98	42.5
PGSC0003DMT400074103	Potato	plasma membrane	41.98	42.44
CDX77309	Canola	plasma membrane	41.68	42.26
Solyc03g118510.2.1	Tomato	nucleus	42.6	42.21
Solyc06g068910.2.1	Tomato	plasma membrane	40.76	42.11
KRH17350	Soybean	extracellular	40.0	41.99
KRH60559	Soybean	endoplasmic reticulum	41.98	41.92
KRH72980	Soybean	extracellular	38.78	41.5
Bra021408.1-P	Field mustard	plasma membrane	38.47	41.38
CDY51524	Canola	plasma membrane	39.08	41.29
Bra040609.1-P	Field mustard	plasma membrane	39.08	41.09
CDY28719	Canola	plasma membrane	37.86	41.06
Bra008611.1-P	Field mustard	plasma membrane	38.63	41.0
CDX69441	Canola	plasma membrane	38.63	40.94
CDY49655	Canola	plasma membrane	38.47	40.84
KXG26481	Sorghum	plasma membrane	41.68	40.62
AT1G48480.1	Thale cress	plasma membrane	40.61	40.61
Bra023574.1-P	Field mustard	plasma membrane	37.71	40.29
CDX85498	Canola	plasma membrane	37.71	40.29
GSMUA_Achr7P11160_001	Banana	plasma membrane	32.82	40.26
EER90996	Sorghum	plasma membrane	42.75	40.23
AT5G16590.1	Thale cress	plasma membrane	38.17	40.0
CDY38103	Canola	plasma membrane	37.4	39.97
EES19702	Sorghum	plasma membrane	38.02	39.34
KRH48661	Soybean	nucleus	40.92	39.18
AT3G02880.1	Thale cress	plasma membrane	37.4	39.08
EES01662	Sorghum	plasma membrane	37.56	38.74
KXG36955	Sorghum	plasma membrane	37.4	38.34
KRH39040	Soybean	plasma membrane	38.02	38.07
EES18787	Sorghum	plasma membrane	38.47	36.52
OQU92655	Sorghum	plasma membrane	35.42	36.48
KXG31530	Sorghum	plasma membrane	37.1	36.43
EES03251	Sorghum	plasma membrane	38.17	36.23
EES02541	Sorghum	plasma membrane	36.79	33.94
KXG33230	Sorghum	plasma membrane	31.76	31.52
OQU82868	Sorghum	plasma membrane	33.89	28.83
EES07820	Sorghum	plasma membrane	30.84	28.77
KXG27266	Sorghum	plasma membrane	29.16	27.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:8075388	UniProt:C5YL32
EnsemblPlants:EES15012	ProteinID:EES15012	ProteinID:EES15012.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF08263
PFAM:PF13855	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF30	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3007G132300	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0001A87B0A	RefSeq:XP_002445517.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:55205000..55207456

Molecular Weight (calculated)

69740.9 Da

IEP (calculated)

9.633

GRAVY (calculated)

-0.036

Length

655 amino acids

Sequence
(BLAST)

001: MARQRRPVGG ARVAVLFVVV ALLAAALPGL VAQDLAGDRL ALLALRDALD RGRLLPWNTA DPTPCKWRGV LCSNQTGQGV PQRVVELRLP GKRLIGTIPL
101: GTVGNLTALQ ALSLRHNGIT GGIPADIGNC DQLTVVNLTR NQFAGAVPEG FFSLAVLRNV DLSRNRLAGG VSQEFNRLKQ LDTLFLDNND FAGALPPGFY
201: LPSLSRFNVS FNAQLTGPVP ASLAGMPASA FQGTALCGGP LLACPNSPGG EKKKRLSRWA IVGIIAGAAL VLLLIVGLVA CLRRRQVASA ASAGRPTETA
301: AAANVRETTT PITVTLARTD RDAVKQSHAP PLAPVMISEG KKLVFLGSAP DRPYDLETLL RASAEVLGKG QHGTTYRATL DGGEPVLAVK RLREVHLSEN
401: EFRHRATALG ALHHGNLTRL RAYFYSKEEK LLVYDFVGAG SLSALLHDGS LEGRARLDFT ARARIALAAA RGVAFIHQGG AKSSHGNLKS SNIVVTATRD
501: GAYVSDYGIA QVTGAAAPPP RRGAGYHAPE VTDARSVPQS ADVYSFGVVV LELLSGRAPQ HALPEGADGV DLPRWVRSVV QEEWTSEVFD AAIANEPRVE
601: GEMMRLLQLG IECTEQRPDR RPTMAEVEAR IERIVEDTCR KDDFSSTDGS RSVSA

Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)

001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD

Arabidopsis Description

RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.