Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d011707_P001 Maize plasma membrane 87.88 89.09
Os01t0711200-01 Rice plasma membrane 74.85 75.3
TraesCS3A01G250300.1 Wheat plasma membrane 72.42 74.22
HORVU3Hr1G067050.2 Barley plasma membrane 72.73 73.85
HORVU3Hr1G074930.2 Barley plasma membrane 72.73 73.85
TraesCS3D01G250700.1 Wheat plasma membrane 72.73 73.73
TraesCS3B01G279800.1 Wheat plasma membrane 71.52 73.29
VIT_04s0008g01220.t01 Wine grape plasma membrane 37.42 40.62
EES19702 Sorghum plasma membrane 35.76 37.28
Solyc11g069960.1.1 Tomato plasma membrane 34.85 36.22
PGSC0003DMT400050673 Potato plasma membrane 34.85 36.16
EES01662 Sorghum plasma membrane 34.55 35.91
EES02541 Sorghum plasma membrane 38.03 35.35
KXG36955 Sorghum plasma membrane 33.18 34.27
EER95247 Sorghum plasma membrane 34.7 33.98
OQU92655 Sorghum plasma membrane 31.67 32.86
EES03251 Sorghum plasma membrane 33.64 32.17
KXG31530 Sorghum plasma membrane 32.27 31.93
EES15012 Sorghum plasma membrane 31.52 31.76
EER90996 Sorghum plasma membrane 33.48 31.75
KXG35590 Sorghum plasma membrane 30.91 31.24
EES18787 Sorghum plasma membrane 32.58 31.16
KXG26481 Sorghum plasma membrane 31.67 31.1
EES07820 Sorghum plasma membrane 32.42 30.48
OQU82868 Sorghum plasma membrane 34.09 29.22
KXG27266 Sorghum plasma membrane 29.24 27.53
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7UniProt:A0A1B6Q5N9GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611
EnsemblPlants:KXG33230ProteinID:KXG33230ProteinID:KXG33230.1InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:Leu-rich_rpt
PFAM:PF07714PFAM:PF08263PFAM:PF13855PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF26
InterPro:Prot_kinase_domEnsemblPlantsGene:SORBI_3003G274900SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI00081AD00ASEG:seg:::
Description
hypothetical protein
Coordinates
chr3:+:61118480..61120849
Molecular Weight (calculated)
70539.5 Da
IEP (calculated)
8.676
GRAVY (calculated)
-0.124
Length
660 amino acids
Sequence
(BLAST)
001: MVALRVLLLT LAIASASASA PAPSPDAVAL LAFKSVCSDR AAALGSWTES SDPCAAKWRG VTCQRPSSSS SLTSPLRVRR VVLEGLRLGG HAAALELLAD
101: LPVLSSLSLK NNTFTGALHA VDFSRLAPHL KLLYLSGNGF SGRFPESVLR LRHLRRLDLS GNHLAGPIPP EIGHCLRALL TLNIQRNSFV GFVPDSLDAM
201: PMLAELNVSG NHLEGRIPNR LAAAFPASSF DGNPGLCGAP LARRCNEPQQ IVYNDGGGEA SNNGSMTTGR GNKIHDRWMV VMIMSAVGAA VASLVAAALC
301: AVLLLKNRKP ARRPRAGSTS GNSTVAREET VRFDGCCVEF DVATLMQGAA EMLGKGATAT TYRVVMGGNV VDASDAGGVD EAHGEVVVVK RMRRRDGTSR
401: EDERRRRELA REMGTWRHAN VVGLRAFYAS TEELLLVFDY MPTGSLHSLL HENRGPARVP LGWQTRLKLA QDAAHGLAYL HGVSGGNLSH RHLTSSNILI
501: DGSGNARVSD FALLQLLAPA PTGEALQKQD VHGFGVILLE LLTGRQSTEG DGSADLPRWA RTVVREERTC EVFDVELPRS KGAEDEMVAL LQVALLCVAD
601: NPRERPRMAV VAKMIEDIRD RGSKRSNNKC SASPSQAGHS YESSPSVSED TTRSTPASSS
Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)
001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ
Arabidopsis Description
Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.