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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038487_P003 Maize plasma membrane 93.36 93.22
Os05t0480400-01 Rice plasma membrane 82.31 81.66
TraesCS1D01G301400.1 Wheat vacuole 79.94 79.06
TraesCS1A01G301800.2 Wheat plasma membrane, vacuole 79.78 78.91
TraesCS1B01G311800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 79.46 78.59
EES01662 Sorghum plasma membrane 78.36 78.11
GSMUA_Achr7P21970_001 Banana plasma membrane 55.77 68.41
TraesCS1B01G311700.1 Wheat plasma membrane, plastid 51.18 68.35
GSMUA_Achr6P25170_001 Banana plasma membrane 52.45 64.97
GSMUA_AchrUn_... Banana plasma membrane 49.92 64.62
VIT_06s0004g08210.t01 Wine grape plasma membrane 62.4 62.01
PGSC0003DMT400078299 Potato plasma membrane 60.03 60.41
Solyc06g082610.2.1 Tomato plasma membrane 59.24 60.0
CDX88667 Canola plasma membrane 58.93 59.68
VIT_08s0040g00060.t01 Wine grape plasma membrane 59.4 59.31
Bra006774.1-P Field mustard plasma membrane 60.51 58.92
KRH72840 Soybean nucleus 60.66 58.72
CDY02808 Canola plastid 38.86 58.43
KRH17210 Soybean nucleus 60.19 58.17
KRH00489 Soybean plasma membrane 55.61 57.99
Bra020377.1-P Field mustard plastid 38.39 57.72
CDY58565 Canola plasma membrane 59.24 57.43
Solyc09g030450.2.1 Tomato plasma membrane 57.35 57.35
KXG36955 Sorghum plasma membrane 57.82 57.28
KRG98109 Soybean mitochondrion 60.35 57.19
AT5G58300.1 Thale cress plasma membrane 58.93 57.03
KRH40666 Soybean plasma membrane 54.66 57.0
HORVU1Hr1G069510.6 Barley plasma membrane 57.66 56.85
PGSC0003DMT400013468 Potato plasma membrane 56.56 56.38
CDY32713 Canola plasma membrane 57.82 56.22
KRH30670 Soybean plasma membrane 59.56 56.18
PGSC0003DMT400046218 Potato plasma membrane 57.66 55.98
OQU92655 Sorghum plasma membrane 56.24 55.97
Solyc03g095490.2.1 Tomato plastid 55.77 55.59
AT3G08680.2 Thale cress plasma membrane 55.45 54.84
CDY27986 Canola plasma membrane 54.5 54.68
KRH53701 Soybean plasma membrane 55.45 54.67
PGSC0003DMT400070937 Potato plasma membrane 51.03 54.56
CDY35996 Canola plasma membrane 54.34 54.17
KRH64226 Soybean plasma membrane 54.5 53.91
KRH72555 Soybean plasma membrane 54.66 53.4
Solyc06g048560.1.1 Tomato plasma membrane 49.76 53.12
Bra040054.1-P Field mustard plasma membrane, plastid 53.4 52.98
KRH16952 Soybean plasma membrane 54.19 52.77
CDX70172 Canola plasma membrane 51.97 52.72
Bra009091.1-P Field mustard plasma membrane 51.97 52.72
CDX98821 Canola plasma membrane 52.29 52.71
AT5G05160.1 Thale cress plasma membrane 51.82 51.25
GSMUA_Achr11P... Banana plasma membrane 61.45 47.04
KXG31530 Sorghum plasma membrane 48.66 46.18
EER95247 Sorghum plasma membrane 47.08 44.21
EES03251 Sorghum plasma membrane 47.71 43.77
KXG26481 Sorghum plasma membrane 44.71 42.11
EER90996 Sorghum plasma membrane 45.02 40.95
EES18787 Sorghum plasma membrane 44.39 40.72
KXG35590 Sorghum plasma membrane 40.92 39.66
EES15012 Sorghum plasma membrane 39.34 38.02
EES02541 Sorghum plasma membrane 41.55 37.04
KXG33230 Sorghum plasma membrane 37.28 35.76
OQU82868 Sorghum plasma membrane 41.55 34.16
EES07820 Sorghum plasma membrane 33.65 30.34
KXG27266 Sorghum plasma membrane 33.33 30.1
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8077010UniProt:C5YZU1
EnsemblPlants:EES19702ProteinID:EES19702ProteinID:EES19702.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00560
PFAM:PF07714PFAM:PF08263PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107PFscan:PS50011
PFscan:PS51450PANTHER:PTHR27008PANTHER:PTHR27008:SF18InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00369
EnsemblPlantsGene:SORBI_3009G175100SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A88EE6RefSeq:XP_002441272.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr9:-:53017401..53023665
Molecular Weight (calculated)
69408.7 Da
IEP (calculated)
8.388
GRAVY (calculated)
-0.134
Length
633 amino acids
Sequence
(BLAST)
001: MWHLKLIAFL YGSLFFMHLP YARGSDLNTD KQALLAFAAS LPHGRKVNWT STTQVCTSWV GITCTLDGTR VREVRLPAIG LFGPIPSGTL GKLDALEVLS
101: LRSNRLTINL PPDVPSIPSL RSLYLQHNNL SGIIPSSLSS SLTFLDLSYN SFNGEIPSEV QAITELTALL LQNNSLSGPI PDLRLPKLRH LDLSNNNLSG
201: PIPPSLQKFP ATSFLGNAFL CGFPLEPCPG TPAPSPSPPS PQNGKRSFWK KLSRGVKIAI AAGGGAVLLI LILILLVCIF KRKRDAEHGA ASSSSKGKSI
301: AGGRGEKSKG EYSSGVQEAE RNKLFFFEGC SYNFDLEDLL RASAEVLGKG SYGTTYKAVL EDGTTVVVKR LKEVVAGKRE FEQQMELIGK VCQHQNTVPL
401: RAYYYSKDEK LLVYDYVPLG SLCAALHGNK AAGRTPLDWE TRVKIALGAA RGMAYLHAEG GGKFIHGNIK SSNILISQEL SACVTEFGLA QLMATPHVHP
501: RLIGYRSPEV LETRKPTQKS DVYSFGVLLL EMLTGKAPLR SPGRDDSIEH LPRWVQSVVR EEWTSEVFDV DLLRHPNVED EMVQMLHVAM ACVAVVPDER
601: PRMEEVVSRI EEIRSSYSET KTSPEDNPRE GAF
Best Arabidopsis Sequence Match ( AT5G58300.2 )
(BLAST)
001: MMQFHFQFYV GPVFTLRPSK GFLSTCLVSF LFVTTTFCSY AIADLNSDRQ ALLAFAASVP HLRRLNWNST NHICKSWVGV TCTSDGTSVH ALRLPGIGLL
101: GPIPPNTLGK LESLRILSLR SNLLSGNLPP DIHSLPSLDY IYLQHNNFSG EVPSFVSRQL NILDLSFNSF TGKIPATFQN LKQLTGLSLQ NNKLSGPVPN
201: LDTVSLRRLN LSNNHLNGSI PSALGGFPSS SFSGNTLLCG LPLQPCATSS PPPSLTPHIS TPPLPPFPHK EGSKRKLHVS TIIPIAAGGA ALLLLITVII
301: LCCCIKKKDK REDSIVKVKT LTEKAKQEFG SGVQEPEKNK LVFFNGCSYN FDLEDLLRAS AEVLGKGSYG TAYKAVLEES TTVVVKRLKE VAAGKREFEQ
401: QMEIISRVGN HPSVVPLRAY YYSKDEKLMV CDYYPAGNLS SLLHGNRGSE KTPLDWDSRV KITLSAAKGI AHLHAAGGPK FSHGNIKSSN VIMKQESDAC
501: ISDFGLTPLM AVPIAPMRGA GYRAPEVMET RKHTHKSDVY SFGVLILEML TGKSPVQSPS RDDMVDLPRW VQSVVREEWT SEVFDIELMR FQNIEEEMVQ
601: MLQIAMACVA QVPEVRPTMD DVVRMIEEIR VSDSETTRPS SDDNSKPKDS NVQV
Arabidopsis Description
Probable inactive receptor kinase At5g58300 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.