CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88180
EER93269
EES01631
EES01966
EES05571
EES09201
EES09256
EES12001
EES16322
KXG22952
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48480.1	EER88180	AT3G17950.1	15618630
AT1G48480.1	EES05571	AT3G17950.1	15618630
AT1G48480.1	EES01966	AT3G27210.1	15618630
AT1G48480.1	EES12001	AT3G27210.1	15618630
AT3G02880.1	EES01631	AT2G41090.1	17360592
AT3G02880.1	EES09201	AT2G41090.1	17360592
AT3G02880.1	EES16322	AT2G41090.1	17360592
AT3G02880.1	OQU78227	AT2G41090.1	17360592
AT3G02880.1	EES01631	AT5G21274.1	17360592
AT3G02880.1	EES09201	AT5G21274.1	17360592
AT3G02880.1	EES16322	AT5G21274.1	17360592
AT3G02880.1	OQU78227	AT5G21274.1	17360592
AT3G17840.1	EER88180	AT3G17950.1	15618630
AT3G17840.1	EES05571	AT3G17950.1	15618630
AT3G17840.1	EES01966	AT3G27210.1	15618630
AT3G17840.1	EES12001	AT3G27210.1	15618630
AT3G17840.1	EER93269	AT3G51310.1	15618630
AT3G17840.1	EES09256	AT5G19140.1	15618630
AT3G17840.1	KXG22952	AT5G19140.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048054_P002	Maize	mitochondrion, plasma membrane	95.4	95.68
Zm00001d048053_P001	Maize	plasma membrane	94.96	95.67
Os03t0223000-02	Rice	plasma membrane	88.72	88.59
TraesCS4D01G241100.1	Wheat	plasma membrane	84.72	84.84
TraesCS4A01G064200.1	Wheat	plasma membrane	83.68	82.7
TraesCS4B01G241500.1	Wheat	plasma membrane	77.0	82.38
HORVU4Hr1G066900.1	Barley	plasma membrane	60.09	75.56
PGSC0003DMT400036789	Potato	cytosol	32.64	68.54
GSMUA_Achr10P...	Banana	plasma membrane	53.12	62.15
GSMUA_Achr2P21610_001	Banana	plasma membrane	54.15	60.33
GSMUA_Achr6P05910_001	Banana	extracellular, plasma membrane, vacuole	50.3	60.21
VIT_14s0006g01080.t01	Wine grape	plasma membrane	56.23	59.31
GSMUA_Achr3P02160_001	Banana	plasma membrane	41.69	58.42
Solyc11g011020.1.1	Tomato	nucleus	55.19	57.94
GSMUA_Achr7P11160_001	Banana	plasma membrane	45.85	57.87
KRH41871	Soybean	endoplasmic reticulum	55.64	57.78
Solyc03g118510.2.1	Tomato	nucleus	56.53	57.64
PGSC0003DMT400040459	Potato	plasma membrane	55.19	57.5
KRH60559	Soybean	endoplasmic reticulum	55.79	57.32
PGSC0003DMT400074103	Potato	plasma membrane	54.9	57.1
Solyc06g068910.2.1	Tomato	plasma membrane	53.26	56.62
KRH72980	Soybean	extracellular	50.59	55.72
KRH17350	Soybean	extracellular	51.34	55.45
VIT_17s0000g02010.t01	Wine grape	plasma membrane	55.19	55.36
EER90996	Sorghum	plasma membrane	56.97	55.17
CDY67567	Canola	plasma membrane	47.33	54.72
CDX77309	Canola	plasma membrane	52.08	54.33
Bra014140.1-P	Field mustard	plasma membrane	51.19	54.08
CDY41827	Canola	plasma membrane	51.63	53.79
Bra021277.1-P	Field mustard	plasma membrane	50.3	53.64
CDY61284	Canola	plasma membrane	50.15	53.48
AT1G48480.1	Thale cress	plasma membrane	51.78	53.28
CDX92167	Canola	plasma membrane	49.11	53.04
CDX95816	Canola	plasma membrane	46.29	52.88
AT3G17840.1	Thale cress	plasma membrane	50.45	52.55
Bra022250.1-P	Field mustard	plasma membrane	48.96	52.3
KRH48661	Soybean	nucleus	52.97	52.19
Bra021408.1-P	Field mustard	plasma membrane	46.74	51.72
Bra023574.1-P	Field mustard	plasma membrane	46.14	50.73
CDY38103	Canola	plasma membrane	46.14	50.73
CDX85498	Canola	plasma membrane	46.14	50.73
CDY49655	Canola	plasma membrane	45.99	50.24
KRH39040	Soybean	plasma membrane	48.52	50.0
KXG26481	Sorghum	plasma membrane	49.7	49.85
Bra008611.1-P	Field mustard	plasma membrane	45.55	49.76
CDX69441	Canola	plasma membrane	45.55	49.68
CDY51524	Canola	plasma membrane	45.55	49.52
CDY28719	Canola	plasma membrane	44.21	49.34
AT3G02880.1	Thale cress	plasma membrane	45.85	49.28
Bra040609.1-P	Field mustard	plasma membrane	45.55	49.28
AT5G16590.1	Thale cress	plasma membrane	45.4	48.96
EES01662	Sorghum	plasma membrane	44.51	47.24
EES19702	Sorghum	plasma membrane	44.21	47.08
KXG35590	Sorghum	plasma membrane	44.51	45.94
KXG36955	Sorghum	plasma membrane	43.18	45.54
EES03251	Sorghum	plasma membrane	46.59	45.51
OQU92655	Sorghum	plasma membrane	42.58	45.13
EES15012	Sorghum	plasma membrane	42.58	43.82
EES18787	Sorghum	plasma membrane	42.58	41.59
KXG31530	Sorghum	plasma membrane	40.95	41.38
EES02541	Sorghum	plasma membrane	37.98	36.06
KXG33230	Sorghum	plasma membrane	33.98	34.7
OQU82868	Sorghum	plasma membrane	37.83	33.12
EES07820	Sorghum	plasma membrane	33.98	32.62
KXG27266	Sorghum	plasma membrane	30.12	28.96

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	EntrezGene:8056870	UniProt:C5WSN2
EnsemblPlants:EER95247	ProteinID:EER95247	ProteinID:EER95247.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27008
PANTHER:PTHR27008:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3001G451800	SUPFAM:SSF52058	SUPFAM:SSF56112
unigene:Sbi.13236	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A83380	RefSeq:XP_002468249.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:72864349..72870674

Molecular Weight (calculated)

70778.6 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.043

Length

674 amino acids

Sequence
(BLAST)

001: MAAMPAPAAG LAILVLFAAA LPALYADDLN SDAQALQALR SAVGRSALPS WNSTTPTCQW QGVTCESGRV VELRLPGAGL MGTLPSEVLG NLSALRTLSL
101: RYNALTGPIP DDVSRLSELR AIYFQHNSFS GDVPASLFEL KNLVRLDIAG NKFTGEISPD FNKLIRLGTL YLDGNSFTGE IPKLQLPALE QFNVSYNQLN
201: GSIPSTLRKM PKDSFLGNTG LCGGPLGLCP GETAPTPAGS PESQPGAGGA ADVGGGKKKK LSGGAIAGIA IGSVFGVLLL LALLFFLCRK RSSAPRSAAT
301: VEKGRELGME PMDVEPKGQN GSAAGAGGHN GAAAAVAAPT AAAAAAATAA AAKTGGSTGS KKLIFFGPMA AAPPFDLEDL LRASAEVLGK GAFGTAYKAV
401: MENGSAVAVK RLKDVDLPEP EFRERIAAIG AVQHELVVPL RAYYFSKDEK LLVYDYMSMG SLSALLHGNR ASGRTPLDWE TRSAIALAAA RGVAHIHSTG
501: PTASHGNIKS SNVLLTKNYE ARVSDHGLPT LVGPSFSPTR VSGYRAPEVT DIRRVSQKAD VYSFGVLLLE LLTGKAPTHA VVNEEGLDLP RWVQSVVREE
601: WTAEVFDQEL LRYQNVEEEM VQLLQLAIDC SAQHPDRRPA MSEVATRIDD IRRSSLGGGD RQAADSAEGD EPSL

Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)

001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD

Arabidopsis Description

RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.