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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG94300
KRG94493
KRH02111
KRH06973
KRH11390
KRH15953
KRH16932
KRH20897
KRH28827
KRH38367
KRH39052
KRH41860
KRH48656
KRH51038
KRH53706
KRH57661
KRH72549
KRH76626

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 KRH39052 AT3G17950.1 15618630
AT1G48480.1 KRH41860 AT3G17950.1 15618630
AT1G48480.1 KRH48656 AT3G17950.1 15618630
AT1G48480.1 KRG94300 AT3G27210.1 15618630
AT1G48480.1 KRG94493 AT3G27210.1 15618630
AT1G48480.1 KRH06973 AT3G27210.1 15618630
AT1G48480.1 KRH57661 AT3G27210.1 15618630
AT1G48480.1 KRH16932 AT5G05190.1 15618630
AT1G48480.1 KRH53706 AT5G05190.1 15618630
AT1G48480.1 KRH72549 AT5G05190.1 15618630
AT3G17840.1 KRH39052 AT3G17950.1 15618630
AT3G17840.1 KRH41860 AT3G17950.1 15618630
AT3G17840.1 KRH48656 AT3G17950.1 15618630
AT3G17840.1 KRG94300 AT3G27210.1 15618630
AT3G17840.1 KRG94493 AT3G27210.1 15618630
AT3G17840.1 KRH06973 AT3G27210.1 15618630
AT3G17840.1 KRH57661 AT3G27210.1 15618630
AT3G17840.1 KRH15953 AT3G51310.1 15618630
AT3G17840.1 KRH28827 AT3G51310.1 15618630
AT3G17840.1 KRH76626 AT3G51310.1 15618630
AT3G17840.1 KRH16932 AT5G05190.1 15618630
AT3G17840.1 KRH53706 AT5G05190.1 15618630
AT3G17840.1 KRH72549 AT5G05190.1 15618630
AT3G17840.1 KRH02111 AT5G19140.1 15618630
AT3G17840.1 KRH11390 AT5G19140.1 15618630
AT3G17840.1 KRH20897 AT5G19140.1 15618630
AT3G17840.1 KRH38367 AT5G19140.1 15618630
AT3G17840.1 KRH51038 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH60559 Soybean endoplasmic reticulum 93.53 92.53
PGSC0003DMT400036789 Potato cytosol 38.67 78.19
VIT_17s0000g02010.t01 Wine grape plasma membrane 69.18 66.82
Os03t0712400-02 Rice plasma membrane 22.34 64.44
KRH48661 Soybean nucleus 67.8 64.33
KRH39040 Soybean plasma membrane 63.94 63.46
Solyc06g068910.2.1 Tomato plasma membrane 61.94 63.41
PGSC0003DMT400074103 Potato plasma membrane 63.02 63.12
Solyc03g118510.2.1 Tomato nucleus 63.64 62.48
CDY67567 Canola plasma membrane 55.47 61.75
CDX95816 Canola plasma membrane 55.78 61.36
AT1G48480.1 Thale cress plasma membrane 61.79 61.22
CDX92167 Canola plasma membrane 58.86 61.22
Bra014140.1-P Field mustard plasma membrane 59.94 60.97
Bra021277.1-P Field mustard plasma membrane 59.32 60.92
CDY61284 Canola plasma membrane 59.32 60.92
AT3G17840.1 Thale cress plasma membrane 60.55 60.74
CDY41827 Canola plasma membrane 59.94 60.12
Bra022250.1-P Field mustard plasma membrane 58.24 59.9
CDX77309 Canola plasma membrane 59.32 59.6
GSMUA_Achr2P21610_001 Banana plasma membrane 54.7 58.68
GSMUA_Achr10P... Banana plasma membrane 51.93 58.51
KRH17350 Soybean extracellular 56.24 58.49
GSMUA_Achr3P02160_001 Banana plasma membrane 43.14 58.21
GSMUA_Achr3P07440_001 Banana plasma membrane 46.38 58.11
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 50.23 57.9
KRH72980 Soybean extracellular 54.08 57.35
GSMUA_Achr8P23000_001 Banana plasma membrane 48.69 57.25
KRH63039 Soybean cytosol 23.27 57.2
Zm00001d048053_P001 Maize plasma membrane 58.24 56.5
TraesCS4D01G241100.1 Wheat plasma membrane 58.09 56.02
Os03t0223000-02 Rice plasma membrane 58.09 55.85
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 57.78 55.8
EER95247 Sorghum plasma membrane 57.78 55.64
GSMUA_Achr9P15690_001 Banana plasma membrane 47.77 55.36
GSMUA_Achr7P11160_001 Banana plasma membrane 45.45 55.24
TraesCS4A01G064200.1 Wheat plasma membrane 57.47 54.69
TraesCS4B01G241500.1 Wheat plasma membrane 51.77 53.33
TraesCS4D01G046900.1 Wheat plasma membrane 54.85 53.06
TraesCS4B01G047100.1 Wheat plasma membrane 55.16 53.04
HORVU4Hr1G007550.1 Barley plasma membrane 54.55 52.99
TraesCS4A01G267300.1 Wheat plasma membrane 54.08 52.15
KRH03778 Soybean endoplasmic reticulum 51.31 51.23
EER90996 Sorghum plasma membrane 54.39 50.72
Zm00001d033745_P001 Maize plasma membrane 53.62 50.14
KRH56662 Soybean plasma membrane 49.15 49.92
KRH54823 Soybean nucleus 49.0 48.7
TraesCS2B01G344900.1 Wheat plasma membrane 49.77 48.43
KXG26481 Sorghum plasma membrane 49.92 48.21
TraesCS2D01G325900.1 Wheat plasma membrane 49.46 47.98
Zm00001d013430_P001 Maize mitochondrion 53.47 47.93
Os04t0463000-01 Rice plasma membrane 49.31 47.83
TraesCS2A01G337000.1 Wheat plasma membrane 49.15 47.68
KRH17210 Soybean nucleus 47.46 47.02
HORVU4Hr1G066900.1 Barley plasma membrane 38.52 46.64
KRH00489 Soybean plasma membrane 43.61 46.62
KRH72840 Soybean nucleus 46.84 46.48
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 48.38 46.38
TraesCS5D01G210800.1 Wheat plasma membrane 45.76 45.83
KRH40666 Soybean plasma membrane 42.84 45.8
KRG98109 Soybean mitochondrion 46.84 45.51
HORVU0Hr1G012920.2 Barley cytosol 35.75 45.49
Zm00001d020403_P001 Maize plasma membrane 44.84 45.4
TraesCS5B01G202900.1 Wheat plasma membrane 45.3 45.02
KRH60009 Soybean plasma membrane 42.37 44.72
KRH53701 Soybean plasma membrane 44.22 44.7
KRH64226 Soybean plasma membrane 44.07 44.69
KXG35590 Sorghum plasma membrane 44.68 44.41
TraesCS5A01G205500.1 Wheat plasma membrane 44.53 44.39
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 41.76 44.14
KRH30670 Soybean plasma membrane 45.61 44.11
TraesCS7A01G214300.1 Wheat plasma membrane 43.45 43.99
HORVU7Hr1G043470.2 Barley plasma membrane 43.3 43.91
TraesCS7D01G216400.1 Wheat plasma membrane 43.3 43.84
Os09t0400500-01 Rice plasma membrane 43.61 43.67
KRH16952 Soybean plasma membrane 43.45 43.38
TraesCS7B01G121600.1 Wheat plasma membrane 42.84 43.37
KRH27860 Soybean plasma membrane 39.29 43.29
KRH72555 Soybean plasma membrane 42.99 43.06
KRH41279 Soybean plasma membrane 42.22 42.95
EES15012 Sorghum plasma membrane 42.53 42.14
KRH35919 Soybean plasma membrane 43.3 41.82
Os08t0427600-00 Rice golgi, plasma membrane 28.66 41.52
Zm00001d032244_P001 Maize plasma membrane 42.37 40.98
KRH18126 Soybean plasma membrane 37.13 40.78
KRH15987 Soybean plasma membrane 39.14 40.77
KRH53424 Soybean plasma membrane 39.29 40.28
KRH64513 Soybean plasma membrane 39.29 40.28
KRH77622 Soybean plasma membrane 38.98 39.84
Zm00001d050355_P001 Maize plasma membrane 42.37 39.57
KRH67820 Soybean plasma membrane 40.83 39.32
KRG94239 Soybean vacuole 38.67 39.1
KRH38161 Soybean plasma membrane 39.6 39.06
KRH20013 Soybean plasma membrane 39.14 36.92
KRG96115 Soybean plasma membrane 40.99 36.79
KRG90862 Soybean mitochondrion 37.44 36.27
KRH32636 Soybean plasma membrane 39.14 34.56
KRH29251 Soybean plasma membrane, vacuole 32.51 32.31
KRH24246 Soybean plasma membrane 32.2 31.33
KRH57812 Soybean golgi, plasma membrane, plastid 30.97 31.21
KRH04550 Soybean plasma membrane 30.82 30.67
KRH61335 Soybean plasma membrane 31.74 28.3
KRH52034 Soybean cytosol, plasma membrane, plastid 21.88 27.26
Protein Annotations
Gene3D:1.10.510.10EntrezGene:100788892MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EMBL:ACUP02004781
EnsemblPlantsGene:GLYMA_08G055700GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538UniProt:I1KQM2InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KRH41871
ProteinID:KRH41871ProteinID:KRH41871.1InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
PFAM:PF00069PFAM:PF08263ScanProsite:PS00107PFscan:PS50011PFscan:PS51450PANTHER:PTHR27008
PANTHER:PTHR27008:SF19InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0002338259SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:-:4283632..4286749
Molecular Weight (calculated)
70379.3 Da
IEP (calculated)
6.457
GRAVY (calculated)
-0.035
Length
649 amino acids
Sequence
(BLAST)
001: MLPQKHTLVA TLAVVLAVAQ AVDLASERAA LLALRSAVGG RTLFWNATRE SPCNWAGVQC EHDHVVELHL PGVALSGEIP VGIFGNLTQL RTLSLRFNAL
101: RGSLPSDLAS CVNLRNLYIQ RNLLSGQIPP FLFDFADLVR LNLGFNNFSG PFPTAFNSLT RLKTLFLENN QLSGPIPDLD KLTLDQFNVS DNLLNGSVPL
201: KLQAFPPDSF LGNSLCGRPL SLCPGDVADP LSVDNNAKDS NTNNKSKLSG GAIAGIVVGS VVFLLLLVFL FIFLCRNKSA KNTSAVDIAT VKHPETESKV
301: LADKGVSDVE NGAGHANGNS AVAAVAVGNG GSKAAEGNAK KLVFFGNAAR AFDLEDLLRA SAEVLGKGTF GTAYKAVLEA GPVVAVKRLK DVTISEKEFR
401: EKIEAVGAMD HESLVPLRAY YFSRDEKLLV YDYMSMGSLS ALLHGNKGAG RTPLNWEVRS GIALGAARGI EYLHSRGPNV SHGNIKSSNI LLTKSYDARV
501: SDFGLAHLVS PSSTPNRVAG YRAPEVTDPR KVSQKVDVYS FGVLLLELLT GKAPTHALLN EEGVDLPRWV QSVVREEWTS EVFDLELLRY QNVEEEMVQL
601: LQLAVDCAAQ YPDMRPSMSE VVRRIQELRR SSLKEEDQDQ IQHDNDIQL
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.