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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
TargetP:secretory
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU2Hr1G068780.1
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU3Hr1G094210.2
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G040970.1
HORVU5Hr1G044710.4
HORVU6Hr1G073560.1
HORVU7Hr1G081830.7

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT1G48480.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT1G48480.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G02880.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT3G02880.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT3G17840.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT3G17840.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT3G17840.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G17840.1 HORVU7Hr1G081830.7 AT3G51310.1 15618630
AT3G17840.1 HORVU5Hr1G040970.1 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G216400.1 Wheat plasma membrane 92.97 92.82
TraesCS7A01G214300.1 Wheat plasma membrane 92.81 92.67
TraesCS7B01G121600.1 Wheat plasma membrane 91.72 91.58
EES15012 Sorghum plasma membrane 66.88 65.34
Zm00001d032244_P001 Maize plasma membrane 65.94 62.89
Os08t0427600-00 Rice golgi, plasma membrane 42.97 61.38
Zm00001d050355_P001 Maize plasma membrane 65.62 60.43
HORVU0Hr1G012920.2 Barley cytosol 45.47 57.06
PGSC0003DMT400036789 Potato cytosol 24.84 49.53
CDY67567 Canola plasma membrane 42.03 46.14
GSMUA_Achr10P... Banana plasma membrane 41.41 46.01
GSMUA_Achr3P02160_001 Banana plasma membrane 34.38 45.74
Bra021277.1-P Field mustard plasma membrane 44.84 45.41
CDY61284 Canola plasma membrane 44.84 45.41
CDX95816 Canola plasma membrane 41.72 45.25
VIT_14s0006g01080.t01 Wine grape plasma membrane 45.16 45.23
CDX92167 Canola plasma membrane 43.91 45.03
GSMUA_Achr2P21610_001 Banana plasma membrane 42.34 44.79
Bra022250.1-P Field mustard plasma membrane 44.06 44.69
Bra014140.1-P Field mustard plasma membrane 44.22 44.36
Solyc06g068910.2.1 Tomato plasma membrane 43.75 44.16
AT3G17840.1 Thale cress plasma membrane 44.53 44.05
CDY41827 Canola plasma membrane 44.38 43.89
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 38.59 43.87
CDX77309 Canola plasma membrane 44.22 43.81
VIT_17s0000g02010.t01 Wine grape plasma membrane 45.94 43.75
PGSC0003DMT400074103 Potato plasma membrane 44.06 43.52
KRH41871 Soybean endoplasmic reticulum 43.91 43.3
Solyc11g011020.1.1 Tomato nucleus 43.28 43.15
PGSC0003DMT400040459 Potato plasma membrane 43.28 42.81
Solyc03g118510.2.1 Tomato nucleus 43.91 42.51
KRH60559 Soybean endoplasmic reticulum 43.28 42.23
KRH17350 Soybean extracellular 41.09 42.15
CDY28719 Canola plasma membrane 39.69 42.05
AT1G48480.1 Thale cress plasma membrane 42.97 41.98
CDY51524 Canola plasma membrane 40.62 41.94
Bra021408.1-P Field mustard plasma membrane 39.84 41.87
Bra040609.1-P Field mustard plasma membrane 40.62 41.73
KRH72980 Soybean extracellular 39.69 41.5
CDY38103 Canola plasma membrane 39.69 41.44
CDY49655 Canola plasma membrane 39.84 41.33
HORVU4Hr1G007550.1 Barley plasma membrane 43.12 41.32
Bra008611.1-P Field mustard plasma membrane 39.69 41.17
CDX85498 Canola plasma membrane 39.38 41.11
Bra023574.1-P Field mustard plasma membrane 39.38 41.11
CDX69441 Canola plasma membrane 39.69 41.1
GSMUA_Achr7P11160_001 Banana plasma membrane 34.22 41.01
AT3G02880.1 Thale cress plasma membrane 40.16 40.99
AT5G16590.1 Thale cress plasma membrane 39.53 40.48
KRH48661 Soybean nucleus 42.34 39.62
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 37.5 39.09
HORVU3Hr1G080740.1 Barley plasma membrane 38.44 38.92
HORVU2Hr1G017650.1 Barley plasma membrane 38.59 38.78
KRH39040 Soybean plasma membrane 39.22 38.38
HORVU4Hr1G050770.1 Barley plasma membrane 38.12 38.3
HORVU3Hr1G053300.1 Barley plasma membrane 38.28 36.57
HORVU3Hr1G089490.3 Barley plasma membrane 39.38 36.31
HORVU5Hr1G007340.7 Barley plasma membrane 37.97 36.11
HORVU4Hr1G066900.1 Barley plasma membrane 30.0 35.82
HORVU3Hr1G074930.2 Barley plasma membrane 32.81 32.31
HORVU3Hr1G067050.2 Barley plasma membrane 32.81 32.31
HORVU5Hr1G063050.3 Barley plasma membrane 22.81 31.2
HORVU3Hr1G007120.2 Barley cytosol, peroxisome 37.5 30.69
HORVU6Hr1G094680.2 Barley plasma membrane 30.78 28.8
HORVU5Hr1G041210.4 Barley plasma membrane 34.53 28.41
HORVU1Hr1G069510.6 Barley plasma membrane 28.12 28.04
HORVU3Hr1G030090.5 Barley cytosol 30.0 27.16
HORVU2Hr1G113540.1 Barley plastid 24.38 25.66
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A287W9A6GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU7Hr1G043470EnsemblPlants:HORVU7Hr1G043470.2
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069
PFAM:PF08263ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF30InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B488965
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:-:131216781..131218790
Molecular Weight (calculated)
67823.7 Da
IEP (calculated)
8.552
GRAVY (calculated)
0.037
Length
640 amino acids
Sequence
(BLAST)
001: GLRFPPAFAL VQLAFALLAV LPRHVAPDLA GDRDALLALR TAVGKHLKWD PSVSPCQGWQ GVSCSPAPGQ RVVEVRLVAK SLSGQIPVGT VGNLTALQTL
101: SLRFNAISGP IPADIGSCAE LRWLYLKGNR FDAGIPESLF LLALLKKADL SENRLTGGVS SEFNRLGNLA TLNLEGNDLN GALPSGLDLP KLTQFNVSYN
201: GQIDGPVPAS LAGLPPSAFL GTALCGGPLA ACPSSEGKKR RKLTFGAIIG IIIAALVALI IVLTICVLVC FSRRRRATAG RSTEAAADVH EGMEPITVTV
301: AMTDRNAVKR SHSPPASPLI GDGKKLVFLG SAPERPYDLE TMLRASAEVL GKGVHGTTYR ATLDGGEPIL AIKRLRDVHL PEREFRDRVV ALGALRHDNL
401: PGLRAYFYSR EEKLLVFDFV GAGSLSSLLH GLAGGGAERL DFTTRARIAL AAARGVAFIH GGGPKASHGS IKASNVVVSG ARDGAYVADY GLAQLVGTAE
501: LPKRGTGYRA PEVTDARAVS QKADVYSFGV VVLELLTGRA PTHALPDGGA GGSGVDLARW VRSVVQEEWT SEVFDSVIGN EPRVEEEMMR LLQLGMECTE
601: QHPDRRPTMA EVEARIERIV EDASRRADFS STDGSRSVSA
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.