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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 extracellular: 25724908
msms PMID: 25724908 doi
VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02880.1 KRG89812 AT2G41090.1 17360592
AT3G02880.1 KRG94975 AT2G41090.1 17360592
AT3G02880.1 KRH18664 AT2G41090.1 17360592
AT3G02880.1 KRG89812 AT5G21274.1 17360592
AT3G02880.1 KRG94975 AT5G21274.1 17360592
AT3G02880.1 KRH18664 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH72980 Soybean extracellular 90.38 92.16
VIT_14s0006g01080.t01 Wine grape plasma membrane 61.38 59.94
Os03t0712400-02 Rice plasma membrane 21.47 59.56
Solyc11g011020.1.1 Tomato nucleus 58.65 57.01
PGSC0003DMT400040459 Potato plasma membrane 58.33 56.26
KRH41871 Soybean endoplasmic reticulum 58.49 56.24
GSMUA_Achr3P07440_001 Banana plasma membrane 46.47 55.98
GSMUA_Achr3P02160_001 Banana plasma membrane 43.11 55.93
KRH60559 Soybean endoplasmic reticulum 58.65 55.79
Bra021408.1-P Field mustard plasma membrane 53.53 54.84
GSMUA_Achr2P21610_001 Banana plasma membrane 52.88 54.55
CDY49655 Canola plasma membrane 53.53 54.13
GSMUA_Achr10P... Banana plasma membrane 49.84 53.99
Bra008611.1-P Field mustard plasma membrane 52.88 53.48
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 48.24 53.46
CDX69441 Canola plasma membrane 52.72 53.24
CDY38103 Canola plasma membrane 52.24 53.18
AT3G02880.1 Thale cress plasma membrane 53.37 53.11
KRH63039 Soybean cytosol 22.44 53.03
Bra023574.1-P Field mustard plasma membrane 52.08 53.02
CDX85498 Canola plasma membrane 52.08 53.02
CDY51524 Canola plasma membrane 52.56 52.9
CDY28719 Canola plasma membrane 50.96 52.65
Bra040609.1-P Field mustard plasma membrane 52.56 52.65
AT5G16590.1 Thale cress plasma membrane 52.56 52.48
Zm00001d048053_P001 Maize plasma membrane 56.09 52.32
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 55.77 51.79
GSMUA_Achr8P23000_001 Banana plasma membrane 45.67 51.63
Os03t0223000-02 Rice plasma membrane 55.61 51.41
EER95247 Sorghum plasma membrane 55.45 51.34
KRH48661 Soybean nucleus 55.61 50.73
TraesCS4D01G241100.1 Wheat plasma membrane 54.65 50.67
GSMUA_Achr9P15690_001 Banana plasma membrane 45.03 50.18
GSMUA_Achr7P11160_001 Banana plasma membrane 42.79 50.0
KRH39040 Soybean plasma membrane 52.4 50.0
TraesCS4A01G064200.1 Wheat plasma membrane 54.01 49.41
TraesCS4D01G046900.1 Wheat plasma membrane 52.4 48.73
TraesCS4B01G047100.1 Wheat plasma membrane 52.56 48.59
HORVU4Hr1G007550.1 Barley plasma membrane 51.6 48.2
TraesCS4B01G241500.1 Wheat plasma membrane 48.4 47.94
TraesCS4A01G267300.1 Wheat plasma membrane 51.6 47.85
EER90996 Sorghum plasma membrane 52.24 46.84
Zm00001d033745_P001 Maize plasma membrane 51.92 46.69
KRH03778 Soybean endoplasmic reticulum 47.92 46.0
KRH56662 Soybean plasma membrane 46.31 45.23
KRH54823 Soybean nucleus 46.31 44.26
Zm00001d013430_P001 Maize mitochondrion 50.48 43.51
TraesCS2B01G344900.1 Wheat plasma membrane 46.47 43.48
TraesCS2A01G337000.1 Wheat plasma membrane 46.47 43.35
TraesCS2D01G325900.1 Wheat plasma membrane 46.31 43.2
TraesCS5D01G210800.1 Wheat plasma membrane 44.71 43.06
TraesCS5A01G205500.1 Wheat plasma membrane 44.87 43.01
KXG26481 Sorghum plasma membrane 45.99 42.71
Os04t0463000-01 Rice plasma membrane 45.51 42.45
TraesCS5B01G202900.1 Wheat plasma membrane 44.39 42.42
Os09t0400500-01 Rice plasma membrane 43.91 42.28
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 45.51 41.95
KRH72840 Soybean nucleus 43.91 41.9
KRH40666 Soybean plasma membrane 40.71 41.85
KRH00489 Soybean plasma membrane 40.54 41.68
HORVU4Hr1G066900.1 Barley plasma membrane 35.74 41.6
TraesCS7D01G216400.1 Wheat plasma membrane 42.63 41.5
Zm00001d020403_P001 Maize plasma membrane 42.63 41.5
TraesCS7A01G214300.1 Wheat plasma membrane 42.47 41.34
HORVU7Hr1G043470.2 Barley plasma membrane 42.15 41.09
KRH17210 Soybean nucleus 43.11 41.07
TraesCS7B01G121600.1 Wheat plasma membrane 42.15 41.03
HORVU0Hr1G012920.2 Barley cytosol 33.49 40.98
KRH53701 Soybean plasma membrane 42.15 40.97
KRG98109 Soybean mitochondrion 43.75 40.87
KRH64226 Soybean plasma membrane 41.83 40.78
KRH60009 Soybean plasma membrane 40.06 40.65
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 39.9 40.55
KRH30670 Soybean plasma membrane 43.27 40.24
KRH27860 Soybean plasma membrane 37.98 40.24
EES15012 Sorghum plasma membrane 41.99 40.0
KXG35590 Sorghum plasma membrane 41.19 39.36
KRH35919 Soybean plasma membrane 41.99 38.99
Zm00001d032244_P001 Maize plasma membrane 41.67 38.75
KRH16952 Soybean plasma membrane 40.22 38.62
KRH41279 Soybean plasma membrane 39.26 38.4
KRH72555 Soybean plasma membrane 39.74 38.27
Zm00001d050355_P001 Maize plasma membrane 42.15 37.84
KRH15987 Soybean plasma membrane 37.66 37.72
KRH64513 Soybean plasma membrane 38.14 37.6
KRH18126 Soybean plasma membrane 35.58 37.56
KRG94239 Soybean vacuole 38.62 37.54
Os08t0427600-00 Rice golgi, plasma membrane 26.76 37.28
KRH53424 Soybean plasma membrane 37.66 37.12
KRH38161 Soybean plasma membrane 39.1 37.08
KRH77622 Soybean plasma membrane 37.66 37.01
KRH67820 Soybean plasma membrane 38.14 35.31
KRH20013 Soybean plasma membrane 37.98 34.45
KRG90862 Soybean mitochondrion 36.22 33.73
KRH32636 Soybean plasma membrane 37.98 32.24
KRG96115 Soybean plasma membrane 37.18 32.09
KRH29251 Soybean plasma membrane, vacuole 33.49 32.01
KRH57812 Soybean golgi, plasma membrane, plastid 32.21 31.21
KRH24246 Soybean plasma membrane 33.17 31.03
KRH04550 Soybean plasma membrane 32.21 30.83
KRH61335 Soybean plasma membrane 30.61 26.24
KRH52034 Soybean cytosol, plasma membrane, plastid 20.03 23.99
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EMBL:ACUP02009083EnsemblPlantsGene:GLYMA_14G214700
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538UniProt:I1MBV9
InterPro:IPR000719InterPro:IPR032675EnsemblPlants:KRH17350ProteinID:KRH17350ProteinID:KRH17350.1InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069PFAM:PF08263ScanProsite:PS00107PFscan:PS50011
PFscan:PS51257PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058
SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00023D2E82SEG:seg:
Description
hypothetical protein
Coordinates
chr14:-:47960858..47963670
Molecular Weight (calculated)
68110.5 Da
IEP (calculated)
7.213
GRAVY (calculated)
-0.154
Length
624 amino acids
Sequence
(BLAST)
001: MKSARVKEAI LLVFMFSLLS IACSDLASDR AGLLLLRSAV GGRTLLWNST QTSPCSWTGV VCASGRVIML RLPAMGLSGS LPSGLGNLTE LQTLSLRFNA
101: LTGRIPEDFA NLKSLRNLYL QGNFFSGEVS DSVFALQNLV RLNLGNNNFS ERNNFTGSIP DLDAPPLDQF NVSFNSLTGS IPNRFSRLDR TAFLGNSQLC
201: GRPLQLCPGT EEKKKSKLSG GAIAGIVIGS VVGVLLILLL LFFLCRKRNK KDENETLPPE KRVVEGEVVS REKSNESGGN SGSVEKSEVR SSSGGGGDNK
301: SLVFFGNVSR VFSLDELLRA SAEVLGKGTF GTTYKATMEM GASVAVKRLK DVTATEKEFR EKIEQVGKMV HHNLVPLRGY FFSRDEKLVV YDYMPMGSLS
401: ALLHANGGVG RTPLNWETRS AIALGAARGI AYIHSLGPTS SHGNIKSSNI LLTKTFEARV SDFGLAYLAL PTSTPNRVSG YCAPEVTDAR KISQKADVYS
501: FGIMLLELLT GKAPTHSSLN DEGVDLPRWV QSVIQDEWNT EVFDMELLRY QSVEEEMVKL LQLALECTAQ YPDKRPSMDV VASKIEEICH PSLEKEEEKN
601: HDFKDADNGF SQQYHSVDSG VSQA
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.