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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 extracellular: 20408568
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 23353019 doi
D Hopff, S Wienkoop, S Lüthje
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004015_P001
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d012031_P001
Zm00001d013059_P003
Zm00001d023376_P002
Zm00001d028948_P001
Zm00001d034492_P006
Zm00001d037340_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d042341_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d051793_P001
Zm00001d052415_P001
Zm00001d052493_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G02880.1 Zm00001d005003_P002 AT2G41090.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d005003_P002 AT5G21274.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT5G21274.1 17360592
AT3G17840.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d013059_P003 AT3G51310.1 15618630
AT3G17840.1 Zm00001d034492_P006 AT3G51310.1 15618630
AT3G17840.1 Zm00001d023376_P002 AT5G19140.1 15618630
AT3G17840.1 Zm00001d052493_P001 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 97.01 96.58
EER95247 Sorghum plasma membrane 95.67 94.96
Os03t0223000-02 Rice plasma membrane 88.04 87.26
TraesCS4D01G241100.1 Wheat plasma membrane 84.75 84.25
TraesCS4A01G064200.1 Wheat plasma membrane 83.71 82.11
TraesCS4B01G241500.1 Wheat plasma membrane 76.83 81.59
HORVU4Hr1G066900.1 Barley plasma membrane 59.64 74.44
PGSC0003DMT400036789 Potato cytosol 33.18 69.16
GSMUA_Achr10P... Banana plasma membrane 53.96 62.67
GSMUA_Achr2P21610_001 Banana plasma membrane 55.16 60.99
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 50.22 59.68
VIT_14s0006g01080.t01 Wine grape plasma membrane 56.65 59.31
GSMUA_Achr3P02160_001 Banana plasma membrane 42.15 58.63
Solyc11g011020.1.1 Tomato nucleus 56.2 58.57
KRH41871 Soybean endoplasmic reticulum 56.5 58.24
GSMUA_Achr7P11160_001 Banana plasma membrane 46.34 58.05
PGSC0003DMT400040459 Potato plasma membrane 56.05 57.96
Solyc03g118510.2.1 Tomato nucleus 56.95 57.64
KRH60559 Soybean endoplasmic reticulum 56.5 57.62
PGSC0003DMT400074103 Potato plasma membrane 54.86 56.64
Solyc06g068910.2.1 Tomato plasma membrane 53.21 56.15
KRH17350 Soybean extracellular 52.32 56.09
KRH72980 Soybean extracellular 51.27 56.05
VIT_17s0000g02010.t01 Wine grape plasma membrane 56.2 55.95
Zm00001d033745_P001 Maize plasma membrane 57.4 55.33
CDY67567 Canola plasma membrane 47.98 55.06
CDX77309 Canola plasma membrane 52.47 54.33
Bra014140.1-P Field mustard plasma membrane 51.57 54.08
Bra021277.1-P Field mustard plasma membrane 50.97 53.96
CDX92167 Canola plasma membrane 50.22 53.85
CDY61284 Canola plasma membrane 50.82 53.8
CDY41827 Canola plasma membrane 52.02 53.79
CDX95816 Canola plasma membrane 47.23 53.56
AT1G48480.1 Thale cress plasma membrane 52.32 53.44
AT3G17840.1 Thale cress plasma membrane 51.57 53.32
Bra022250.1-P Field mustard plasma membrane 49.93 52.93
KRH48661 Soybean nucleus 53.81 52.63
Zm00001d013430_P001 Maize mitochondrion 56.95 52.62
Bra021408.1-P Field mustard plasma membrane 47.09 51.72
CDY38103 Canola plasma membrane 46.94 51.22
Bra023574.1-P Field mustard plasma membrane 46.64 50.9
CDX85498 Canola plasma membrane 46.64 50.9
CDY49655 Canola plasma membrane 46.79 50.73
KRH39040 Soybean plasma membrane 49.18 50.31
Bra008611.1-P Field mustard plasma membrane 46.34 50.24
CDX69441 Canola plasma membrane 46.34 50.16
CDY51524 Canola plasma membrane 46.19 49.84
AT3G02880.1 Thale cress plasma membrane 46.64 49.76
CDY28719 Canola plasma membrane 44.84 49.67
Bra040609.1-P Field mustard plasma membrane 46.19 49.6
AT5G16590.1 Thale cress plasma membrane 46.04 49.28
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 49.03 48.45
Zm00001d011312_P001 Maize mitochondrion, plasma membrane 47.38 46.21
Zm00001d020403_P001 Maize plasma membrane 44.1 46.02
Zm00001d038487_P003 Maize plasma membrane 43.5 45.9
Zm00001d012514_P001 Maize extracellular 42.9 45.63
Zm00001d022432_P001 Maize plasma membrane 42.15 44.34
Zm00001d044434_P001 Maize plasma membrane 46.19 44.33
Zm00001d043071_P001 Maize plasma membrane 43.05 42.99
Zm00001d039188_P001 Maize plasma membrane 41.7 42.66
Zm00001d032244_P001 Maize plasma membrane 42.0 41.88
Zm00001d008965_P001 Maize plasma membrane 42.0 41.82
Zm00001d039325_P001 Maize plasma membrane 39.91 40.64
Zm00001d050355_P001 Maize plasma membrane 41.85 40.29
Zm00001d029040_P001 Maize mitochondrion 41.11 38.19
Zm00001d039967_P001 Maize plasma membrane 35.58 35.9
Zm00001d011707_P001 Maize plasma membrane 33.63 34.56
Zm00001d004929_P001 Maize mitochondrion 38.42 33.51
Zm00001d002068_P001 Maize plasma membrane 30.94 29.53
Zm00001d018541_P002 Maize plasma membrane 33.03 27.9
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10ProteinID:AQL08580.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR032675UniProt:K7WFR7InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069
PFAM:PF08263ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00022103AC
EnsemblPlantsGene:Zm00001d048053EnsemblPlants:Zm00001d048053_P001EnsemblPlants:Zm00001d048053_T001SEG:seg::
Description
Probable inactive receptor kinase
Coordinates
chr9:+:148924294..148927732
Molecular Weight (calculated)
70399.3 Da
IEP (calculated)
7.292
GRAVY (calculated)
-0.034
Length
669 amino acids
Sequence
(BLAST)
001: MPAPAAGLSV LVLFVFAAAL PALSADDLNT DAQALQALRS AVGRSALPSW NSSTPTCQWQ GVTCESGRVV ELRLPGAGLM GNLPSGVLGN LSALRTLSLR
101: YNALTGPIPD DLSRLSELRA IYFQHNSFSG EVPASLFELK NLVRLDIAGN KFSGKISQDF NKLIRLGTLY LDGNSFTGEI PKLQLPALEQ FNVSYNQLNG
201: SIPNTLRKMP KDSFLGNTGL CGGPLGLCPG ESAPTPAGAP ESQPGAGGAG DVGGGKKKKL SGGAIAGIAI GSVFGVLLLL ALLFFLCRKR SSAPRSAAAA
301: AEKGRELGMG PMDVEPKGQN GSAGGHNGVA AAVAVPTAAA AAAVATAAAK TGGSTGSKKL IFFGPMAAAP PFDLEDLLRA SAEVLGKGAF GTAYKAVMEN
401: GSAVAVKRLK DVDLPEPEFR ERIAAIGAVQ HELVVPLRAY YFSKDEKLLV YDYMSMGSLS ALLHGNRASG RTPLDWETRS AIALAAARGV AHIHSTGPTA
501: SHGNIKSSNV LLTKNYEARV SDHGLPTLVG PSFSPTRVSG YRAPEVTDIR RVSQKADVYS FGVLLLELLT GKAPTHAVVN EEGLDLPRWV QSVVREEWTA
601: EVFDQELLRY QNVEEEMVQL LQLAIDCSAQ HPDRRPAMSE VATRIDEIRR SSLGDRQVAD SAEGDEPSL
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.