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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70170
CDX74957
CDX75951
CDX79736
CDX80954
CDX83668
CDX91366
CDX93375
CDX95565
CDX98822
CDY07787
CDY13691
CDY18441
CDY28483
CDY34170
CDY51925
CDY52144

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 CDX74957 AT2G37480.1 15618630
AT1G48480.1 CDX79736 AT2G37480.1 15618630
AT1G48480.1 CDX91366 AT2G37480.1 15618630
AT1G48480.1 CDX93375 AT2G37480.1 15618630
AT1G48480.1 CDY07787 AT2G37480.1 15618630
AT1G48480.1 CDY18441 AT2G37480.1 15618630
AT1G48480.1 CDX75951 AT3G17950.1 15618630
AT1G48480.1 CDX95565 AT3G17950.1 15618630
AT1G48480.1 CDY51925 AT3G17950.1 15618630
AT1G48480.1 CDX83668 AT3G27210.1 15618630
AT1G48480.1 CDY13691 AT3G27210.1 15618630
AT1G48480.1 CDY28483 AT3G27210.1 15618630
AT1G48480.1 CDY34170 AT3G27210.1 15618630
AT1G48480.1 CDX70170 AT5G05190.1 15618630
AT1G48480.1 CDX80954 AT5G05190.1 15618630
AT1G48480.1 CDX98822 AT5G05190.1 15618630
AT1G48480.1 CDY52144 AT5G05190.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41827 Canola plasma membrane 96.59 96.45
AT1G48480.1 Thale cress plasma membrane 86.07 84.89
CDY67567 Canola plasma membrane 66.72 73.93
CDY61284 Canola plasma membrane 71.21 72.78
CDX92167 Canola plasma membrane 69.97 72.44
CDX95816 Canola plasma membrane 66.1 72.37
PGSC0003DMT400036789 Potato cytosol 31.73 63.86
KRH41871 Soybean endoplasmic reticulum 59.6 59.32
VIT_17s0000g02010.t01 Wine grape plasma membrane 61.61 59.23
KRH60559 Soybean endoplasmic reticulum 59.91 58.99
Solyc06g068910.2.1 Tomato plasma membrane 56.5 57.57
PGSC0003DMT400074103 Potato plasma membrane 56.81 56.64
Solyc03g118510.2.1 Tomato nucleus 57.74 56.43
GSMUA_Achr2P21610_001 Banana plasma membrane 50.93 54.38
Os03t0712400-02 Rice plasma membrane 18.73 53.78
GSMUA_Achr3P07440_001 Banana plasma membrane 42.57 53.09
KRH48661 Soybean nucleus 56.04 52.92
GSMUA_Achr3P02160_001 Banana plasma membrane 39.32 52.81
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 45.98 52.75
Zm00001d048053_P001 Maize plasma membrane 54.33 52.47
GSMUA_Achr8P23000_001 Banana plasma membrane 44.58 52.17
EER95247 Sorghum plasma membrane 54.33 52.08
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 54.02 51.93
Os03t0223000-02 Rice plasma membrane 54.18 51.85
KRH39040 Soybean plasma membrane 52.48 51.83
GSMUA_Achr10P... Banana plasma membrane 45.98 51.56
TraesCS4D01G241100.1 Wheat plasma membrane 53.41 51.26
CDY49655 Canola plasma membrane 48.61 50.89
CDX69441 Canola plasma membrane 48.61 50.81
CDX85498 Canola plasma membrane 48.14 50.73
CDY38103 Canola plasma membrane 48.14 50.73
GSMUA_Achr9P15690_001 Banana plasma membrane 43.81 50.54
GSMUA_Achr7P11160_001 Banana plasma membrane 41.49 50.19
TraesCS4B01G047100.1 Wheat plasma membrane 52.32 50.07
CDY28719 Canola plasma membrane 46.75 50.0
CDY51524 Canola plasma membrane 47.99 50.0
TraesCS4B01G241500.1 Wheat plasma membrane 48.76 50.0
TraesCS4D01G046900.1 Wheat plasma membrane 51.86 49.93
TraesCS4A01G064200.1 Wheat plasma membrane 52.48 49.71
TraesCS4A01G267300.1 Wheat plasma membrane 51.55 49.48
HORVU4Hr1G007550.1 Barley plasma membrane 51.08 49.4
EER90996 Sorghum plasma membrane 51.55 47.84
Zm00001d033745_P001 Maize plasma membrane 50.93 47.41
CDY03526 Canola cytosol 18.42 46.48
Zm00001d020403_P001 Maize plasma membrane 45.51 45.87
HORVU4Hr1G066900.1 Barley plasma membrane 37.62 45.34
Zm00001d013430_P001 Maize mitochondrion 50.62 45.17
CDX77054 Canola plasma membrane 42.88 44.89
Os04t0463000-01 Rice plasma membrane 46.44 44.84
TraesCS2B01G344900.1 Wheat plasma membrane 46.28 44.83
TraesCS2D01G325900.1 Wheat plasma membrane 46.28 44.69
TraesCS2A01G337000.1 Wheat plasma membrane 46.13 44.54
TraesCS7D01G216400.1 Wheat plasma membrane 44.12 44.46
KXG35590 Sorghum plasma membrane 44.89 44.41
HORVU7Hr1G043470.2 Barley plasma membrane 43.81 44.22
TraesCS7A01G214300.1 Wheat plasma membrane 43.81 44.15
TraesCS7B01G121600.1 Wheat plasma membrane 43.81 44.15
CDY10964 Canola cytosol 9.91 44.14
KXG26481 Sorghum plasma membrane 45.67 43.9
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 45.98 43.87
CDX88667 Canola plasma membrane 42.41 43.84
CDY48185 Canola plasma membrane 44.58 43.84
TraesCS5D01G210800.1 Wheat plasma membrane 43.96 43.83
TraesCS5A01G205500.1 Wheat plasma membrane 43.96 43.63
Os09t0400500-01 Rice plasma membrane 43.65 43.52
CDY04464 Canola plasma membrane 42.57 43.51
TraesCS5B01G202900.1 Wheat plasma membrane 43.81 43.34
CDY02808 Canola plastid 27.86 42.76
CDY32713 Canola plasma membrane 43.03 42.7
CDY27986 Canola plasma membrane 41.64 42.63
CDY58565 Canola plasma membrane 43.03 42.57
CDY35996 Canola plasma membrane 41.64 42.36
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 40.09 42.18
HORVU0Hr1G012920.2 Barley cytosol 32.97 41.76
EES15012 Sorghum plasma membrane 42.26 41.68
CDX70172 Canola plasma membrane 40.09 41.51
CDX98821 Canola plasma membrane 40.25 41.4
CDY25569 Canola mitochondrion 21.52 41.12
CDY34407 Canola mitochondrion 21.52 40.88
CDY08366 Canola plasma membrane 37.0 40.58
CDY38186 Canola plasma membrane 36.84 40.27
Zm00001d032244_P001 Maize plasma membrane 41.8 40.24
CDX94213 Canola plasma membrane 38.08 40.0
Os08t0427600-00 Rice golgi, plasma membrane 27.71 39.96
Zm00001d050355_P001 Maize plasma membrane 42.57 39.57
CDX84553 Canola plasma membrane 40.09 39.42
CDX79688 Canola plasma membrane 39.16 39.29
CDY47625 Canola plasma membrane 39.63 38.67
CDY35028 Canola mitochondrion 14.09 38.56
CDX81508 Canola plasma membrane 38.54 38.49
CDY44903 Canola plasma membrane 35.91 38.47
CDX87143 Canola plasma membrane 36.84 38.33
CDY19849 Canola plasma membrane 36.38 37.84
CDX71488 Canola plasma membrane 42.11 37.21
CDY54343 Canola plasma membrane 33.75 36.52
CDY47068 Canola plasma membrane 33.75 36.45
CDX67503 Canola cytosol, mitochondrion 20.43 34.38
CDX97916 Canola plasma membrane 34.98 34.24
CDY22372 Canola cytosol 15.63 34.24
CDX71536 Canola cytosol 15.48 33.9
CDY19325 Canola plasma membrane 33.75 33.64
CDY34130 Canola cytosol, plastid 32.04 33.6
CDY24545 Canola plasma membrane 33.44 33.54
CDX81336 Canola plasma membrane 30.96 32.1
CDX83117 Canola plasma membrane 32.35 31.91
CDX68581 Canola plasma membrane 32.04 31.7
CDY01430 Canola plasma membrane 32.82 30.99
CDX71537 Canola extracellular 12.07 27.37
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078CMP8EnsemblPlants:CDX77309
ProteinID:CDX77309ProteinID:CDX77309.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00128050001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF08263PFAM:PF13855ScanProsite:PS00107
PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058
SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDCF6CSEG:seg:
Description
BnaC08g03540D
Coordinates
chrLK031810:-:1170597..1173062
Molecular Weight (calculated)
69902.7 Da
IEP (calculated)
8.348
GRAVY (calculated)
-0.171
Length
646 amino acids
Sequence
(BLAST)
001: MRVFPNSSMT ILSVLLTTLL LSLPLPSTQD LNADRAALLS LRSAVGGRTF RWDIRQTSPC NWAGVKCDNN RVTALRLPGV SLSGTIPNGV FGNLTRLRTL
101: SLRLNALTGS LPLDLTTSSD LRHLYLQGNR FSGQIPESLF SLTNLVRLNL AENSFTGGIS SSFNNLTRLK TLFLQDNNLS GSIPDLDLPL VQLNVSNNSL
201: TGSIPKNLQR FESGSFLQTS LCGKPLNICP DEETVPSQPT SGGNRTPPSV GGSNEKRKNK LSGGAIAGIV IGSVVGFALI VVLLMVLCRK RSRAVDGSTI
301: KQQEPVVPRE AAAENGNGYS VTAAAAAAMT GNAKAGEVAG PAAKKLVFFG NATKVFDLED LLRASAEVLG KGTFGTAYKA VLDAVTVVAV KRLKDVVMPD
401: KDFREKIELV GAMDHENLVP LRAYYLSRDE KLLVYDFMHM GSLSALLHGN RGEGRTPLTW DVRSRIALGA ARGLDYLHSQ GTSTSHGNVK SSNTLLTKSH
501: DAKVSDFGLS QLVAASSTTP NRGTGYRAPE VTDPKRVSQK GDVYSFGVVL LELITGKAPS NSVMNEEGVD LPRWVKSVVR DEWRREVFDS ELLSLEREEE
601: EMMEEMVQLG IECTSQHPDQ RPEMAEVVSK IESLRRSGPD QVDEAY
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.