CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97916	Canola	plasma membrane	95.52	93.79
AT1G10850.1	Thale cress	plasma membrane	87.81	85.82
CDY34130	Canola	cytosol, plastid	66.82	70.29
CDY24545	Canola	plasma membrane	69.75	70.19
VIT_01s0010g01660.t01	Wine grape	plasma membrane	64.81	64.32
KRH29251	Soybean	plasma membrane, vacuole	64.2	63.71
KRH24246	Soybean	plasma membrane	64.66	62.82
Solyc04g008650.2.1	Tomato	plasma membrane	63.58	61.77
GSMUA_Achr3P14030_001	Banana	plasma membrane	56.48	58.37
GSMUA_Achr1P17850_001	Banana	plasma membrane	48.3	57.43
PGSC0003DMT400068804	Potato	plasma membrane	63.58	50.74
CDY22372	Canola	cytosol	22.07	48.47
CDX71536	Canola	cytosol	21.91	48.14
EES07820	Sorghum	plasma membrane	49.38	45.58
HORVU6Hr1G094680.2	Barley	plasma membrane	47.84	45.32
TraesCS6B01G472100.1	Wheat	plasma membrane	48.77	45.14
TraesCS6A01G417300.1	Wheat	plasma membrane	48.46	44.92
TraesCS6D01G402600.1	Wheat	plasma membrane	48.15	43.82
CDX81336	Canola	plasma membrane	38.43	39.97
CDX83117	Canola	plasma membrane	39.97	39.54
Zm00001d018541_P002	Maize	plasma membrane	48.15	39.39
CDX68581	Canola	plasma membrane	39.35	39.05
CDY01430	Canola	plasma membrane	41.05	38.89
CDX77054	Canola	plasma membrane	34.26	35.98
CDX71537	Canola	extracellular	15.74	35.79
CDX79688	Canola	plasma membrane	35.03	35.25
CDX81508	Canola	plasma membrane	35.19	35.24
CDX70172	Canola	plasma membrane	33.8	35.1
CDX84553	Canola	plasma membrane	35.34	34.86
CDY04464	Canola	plasma membrane	33.95	34.81
CDX98821	Canola	plasma membrane	33.64	34.71
CDY48185	Canola	plasma membrane	35.19	34.7
CDY35996	Canola	plasma membrane	33.95	34.65
CDY28719	Canola	plasma membrane	32.25	34.6
CDX95816	Canola	plasma membrane	31.48	34.58
CDY27986	Canola	plasma membrane	33.64	34.55
CDX88667	Canola	plasma membrane	33.18	34.4
CDY03526	Canola	cytosol	13.58	34.38
CDY51524	Canola	plasma membrane	32.87	34.35
CDY67567	Canola	plasma membrane	30.86	34.31
CDY44903	Canola	plasma membrane	31.79	34.16
CDY41827	Canola	plasma membrane	33.95	34.0
CDX77309	Canola	plasma membrane	33.64	33.75
CDY49655	Canola	plasma membrane	32.1	33.71
CDY61284	Canola	plasma membrane	32.87	33.7
CDX92167	Canola	plasma membrane	32.41	33.65
CDX69441	Canola	plasma membrane	31.79	33.33
CDY38103	Canola	plasma membrane	31.48	33.28
CDX85498	Canola	plasma membrane	31.48	33.28
CDY58565	Canola	plasma membrane	33.49	33.23
CDY32713	Canola	plasma membrane	32.41	32.26
CDY02808	Canola	plastid	20.68	31.83
CDY34407	Canola	mitochondrion	16.51	31.47
CDX87143	Canola	plasma membrane	29.94	31.24
CDY19849	Canola	plasma membrane	29.78	31.08
CDY08366	Canola	plasma membrane	28.24	31.07
CDY25569	Canola	mitochondrion	16.2	31.07
CDX94213	Canola	plasma membrane	29.48	31.06
CDY38186	Canola	plasma membrane	28.09	30.8
CDY54343	Canola	plasma membrane	28.24	30.65
CDY47068	Canola	plasma membrane	28.24	30.6
CDX71488	Canola	plasma membrane	34.1	30.23
CDY10964	Canola	cytosol	6.64	29.66
CDY35028	Canola	mitochondrion	10.49	28.81
CDY47625	Canola	plasma membrane	29.01	28.4
CDX67503	Canola	cytosol, mitochondrion	15.12	25.52

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:A0A078FY48	UniProt:A0A078FY48
EnsemblPlants:CDY19325	ProteinID:CDY19325	ProteinID:CDY19325.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00008843001	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069
PFAM:PF08263	PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF40	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EF1F32	SEG:seg

Description

BnaC05g08340DBnaC05g08340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FY48]

Coordinates

chrLK032095:+:43150..45202

Molecular Weight (calculated)

70603.1 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.224

Length

648 amino acids

Sequence
(BLAST)

001: MVSSSPPSTL FLLFASTLFL CLLSPARSSD VDSLLALKSS IDPSNSIPWR GTDLCSWEGV KECLNGRVSK LVIEYLNLTG SLDSRTLNQL DQLRVLSFKS
101: NSLSGSIPNL SGLVNLKSVY LNGNNFSGSF PESLTSLHRL KTINLSGNRL SGKIPTSLLR LSRLYTFDVQ DNLFAGSIPP LNQTSLRFFN VSNNKFSGQI
201: PPTRGLKQFD ESSFAGNADL CGDQIRIPCG TSPAPSAKPA PISKKKNNAK LIGIIAGSAA GGVLIFILLL TVLIFCCLRK RKSPGEDRKG KGIAEAEGGG
301: GGGGASETER DIERKDRGFS WERSEEGAVG TLVFLGASDS GETTVVRYTM EDLLKASAET LGRGTLGSTY KAVMESGFIV TVKRLKNARY PRMEEFKRHV
401: EILGQLRHPN LVSLRAYFQA KEERLLVYDY FPNGSLFTLI HGTRASGNGK PLHWTSCLKI AEDLASALLY IHQNPGLTHG NLKSSNVLLG PDFESCLTDY
501: GLSTLHDPDS AEETSAVSLF YKAPECRDPR RASTQPADVY SFGVLLLELL TGRTPFQDLV QEYGSDISRW EPTSSGNEAS EEKLQALLSI ANVCVAIQPE
601: NRPVMREVLK MVRDARAEAP FSSNSSEHSP GRWSDTVQSL PREDQVSI

Best Arabidopsis Sequence Match ( AT1G10850.1 )
(BLAST)

001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q940B9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.