Factsheet for VIT_01s0010g01660.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008650.2.1	Tomato	plasma membrane	71.67	70.16
KRH24246	Soybean	plasma membrane	70.9	69.42
KRH29251	Soybean	plasma membrane, vacuole	69.37	69.37
AT1G10850.1	Thale cress	plasma membrane	67.38	66.36
CDX97916	Canola	plasma membrane	66.62	65.91
Bra019897.1-P	Field mustard	plasma membrane	66.0	65.11
CDY19325	Canola	plasma membrane	64.32	64.81
Bra031492.1-P	Field mustard	plasma membrane	62.17	63.04
CDY24545	Canola	plasma membrane	61.87	62.73
AT1G60630.1	Thale cress	vacuole	62.48	62.58
GSMUA_Achr3P14030_001	Banana	plasma membrane	59.72	62.2
CDY34130	Canola	cytosol, plastid	58.5	62.01
GSMUA_Achr1P17850_001	Banana	plasma membrane	51.0	61.1
PGSC0003DMT400068804	Potato	plasma membrane	70.9	57.02
EES07820	Sorghum	plasma membrane	52.68	49.0
HORVU6Hr1G094680.2	Barley	plasma membrane	51.15	48.83
TraesCS6B01G472100.1	Wheat	plasma membrane	51.3	47.86
TraesCS6A01G417300.1	Wheat	plasma membrane	51.0	47.64
TraesCS6D01G402600.1	Wheat	plasma membrane	51.45	47.19
Zm00001d018541_P002	Maize	plasma membrane	52.37	43.18
VIT_18s0001g10070.t01	Wine grape	plasma membrane	43.34	42.75
VIT_07s0031g00120.t01	Wine grape	plasma membrane	42.42	41.28
VIT_01s0011g03860.t01	Wine grape	plasma membrane	39.36	38.3
VIT_08s0040g00060.t01	Wine grape	plasma membrane	36.6	37.7
VIT_06s0004g08210.t01	Wine grape	plasma membrane	36.75	37.68
VIT_11s0016g04570.t01	Wine grape	plasma membrane	37.67	37.67
VIT_14s0006g01080.t01	Wine grape	plasma membrane	35.38	36.15
VIT_01s0011g05580.t01	Wine grape	plasma membrane	32.77	35.85
VIT_04s0008g01220.t01	Wine grape	plasma membrane	33.08	35.53
VIT_16s0050g02430.t01	Wine grape	plasma membrane	33.23	34.55
VIT_02s0025g01040.t01	Wine grape	plasma membrane	32.92	34.24
VIT_17s0000g02010.t01	Wine grape	plasma membrane	34.92	33.93
VIT_08s0007g04150.t01	Wine grape	plasma membrane	35.22	33.67

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100855399	wikigene:100855399	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB51201	ProteinID:CCB51201.1	UniProt:F6HG08	EMBL:FN595754	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100855399	wikigene:LOC100855399	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF40	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TIGR:TC57086	TMHMM:TMhelix	UniParc:UPI00015C9CB4
ArrayExpress:VIT_01s0010g01660	EnsemblPlantsGene:VIT_01s0010g01660	EnsemblPlants:VIT_01s0010g01660.t01	unigene:Vvi.13881	RefSeq:XP_003631342	RefSeq:XP_003631342.1
RefSeq:XP_010654637.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:17985428..17994297

Molecular Weight (calculated)

71732.6 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.313

Length

653 amino acids

Sequence
(BLAST)

001: MARYSFLLFL FSLMHLQPLV RSGDGETLLA LKSWIDPSNS LQWRGSDFCK WQGVKECMRG RVTKLVLEHL NLNGTLDEKS LAQLDQLRVL SFKENSLSGQ
101: IPDLSGLINL KSLFLNNNNF SGDFPSSLSG LHRLKVIILA GNQISGQIPA SLLKLQRLYI LYLQDNRLTG EIPPLNQTSL RFFNVSNNQL SGEIPLTPAV
201: VRFNQSSFSN NLELCGEQVN SPCPRSPAIS PESPTVPTPS SSSKHSNRTK RIKIIAGSVG GGVLLICLIL LCVSYRRMRR KTVEGRSKGK AVGAVGSPEA
301: ANGGGGGGGG NNERKQGGFS WEGEGLGSLV FCGPGDQQMS YSLEDLLKAS AETLGRGTMG STYKAVMESG FIVTVKRLKD ARYPRLEEFR AQMELLGRLR
401: HPNLVPLRAY FQAKEERLLV YDYFPNGSLF SLIHGSRTSG GGKPLHWTSC LKIGEDLATG LLYIHQNPGL THGNLKSSNV LLGSDFESCL TDYGLTTFRD
501: PDTVEESSAS SLFYRAPECR DTRNPSTQQA DVYSFGVILL ELLTGKTPFQ DLVQEHGSDI PRWVRSVREE ETESGDDPAS GNETSEEKLG ALLNIAMACV
601: SLSPENRPVM REVLRMIKET RAEAQVSSNS SDHSPGRWSD TVQSLPREEH LSI

Best Arabidopsis Sequence Match ( AT1G10850.1 )
(BLAST)

001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q940B9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.