CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 7
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031492.1-P	Field mustard	plasma membrane	99.53	99.53
CDY34130	Canola	cytosol, plastid	88.35	92.37
AT1G60630.1	Thale cress	vacuole	79.81	78.83
CDX97916	Canola	plasma membrane	72.52	70.76
CDY19325	Canola	plasma membrane	70.19	69.75
VIT_01s0010g01660.t01	Wine grape	plasma membrane	62.73	61.87
KRH29251	Soybean	plasma membrane, vacuole	60.71	59.88
KRH24246	Soybean	plasma membrane	60.87	58.77
Solyc04g008650.2.1	Tomato	plasma membrane	60.56	58.47
GSMUA_Achr1P17850_001	Banana	plasma membrane	48.91	57.8
GSMUA_Achr3P14030_001	Banana	plasma membrane	54.5	55.98
CDY22372	Canola	cytosol	23.14	50.51
CDX71536	Canola	cytosol	22.98	50.17
PGSC0003DMT400068804	Potato	plasma membrane	60.71	48.15
HORVU6Hr1G094680.2	Barley	plasma membrane	48.6	45.76
TraesCS6A01G417300.1	Wheat	plasma membrane	49.53	45.64
EES07820	Sorghum	plasma membrane	49.69	45.58
TraesCS6B01G472100.1	Wheat	plasma membrane	48.91	45.0
TraesCS6D01G402600.1	Wheat	plasma membrane	48.91	44.24
CDX81336	Canola	plasma membrane	39.6	40.93
CDX83117	Canola	plasma membrane	40.84	40.15
Zm00001d018541_P002	Maize	plasma membrane	49.07	39.9
CDY01430	Canola	plasma membrane	42.24	39.77
CDX68581	Canola	plasma membrane	40.22	39.66
CDY03526	Canola	cytosol	14.91	37.5
CDX77054	Canola	plasma membrane	35.4	36.95
CDX81508	Canola	plasma membrane	36.34	36.17
CDY48185	Canola	plasma membrane	36.18	35.46
CDY04464	Canola	plasma membrane	34.78	35.44
CDX88667	Canola	plasma membrane	34.32	35.36
CDX79688	Canola	plasma membrane	35.09	35.09
CDX84553	Canola	plasma membrane	35.71	35.01
CDY44903	Canola	plasma membrane	32.76	34.99
CDY35996	Canola	plasma membrane	34.32	34.8
CDY27986	Canola	plasma membrane	34.01	34.71
CDX70172	Canola	plasma membrane	33.54	34.62
CDY67567	Canola	plasma membrane	31.21	34.48
CDX98821	Canola	plasma membrane	33.54	34.39
CDY61284	Canola	plasma membrane	33.39	34.02
CDY58565	Canola	plasma membrane	34.32	33.84
CDX71537	Canola	extracellular	14.91	33.68
CDY28719	Canola	plasma membrane	31.37	33.44
CDX77309	Canola	plasma membrane	33.54	33.44
CDX95816	Canola	plasma membrane	30.59	33.39
CDY49655	Canola	plasma membrane	31.99	33.39
CDY51524	Canola	plasma membrane	32.14	33.39
CDY41827	Canola	plasma membrane	33.54	33.38
CDY32713	Canola	plasma membrane	33.54	33.18
CDX92167	Canola	plasma membrane	31.99	33.01
CDY34407	Canola	mitochondrion	17.39	32.94
CDY38103	Canola	plasma membrane	31.21	32.79
CDX85498	Canola	plasma membrane	31.21	32.79
CDX69441	Canola	plasma membrane	31.37	32.69
CDY25569	Canola	mitochondrion	17.08	32.54
CDY02808	Canola	plastid	21.27	32.54
CDY54343	Canola	plasma membrane	29.97	32.33
CDY47068	Canola	plasma membrane	29.97	32.27
CDX94213	Canola	plasma membrane	30.59	32.03
CDY08366	Canola	plasma membrane	29.19	31.92
CDY35028	Canola	mitochondrion	11.65	31.78
CDY10964	Canola	cytosol	7.14	31.72
CDY38186	Canola	plasma membrane	29.04	31.64
CDX87143	Canola	plasma membrane	30.28	31.4
CDY19849	Canola	plasma membrane	29.97	31.08
CDX71488	Canola	plasma membrane	34.63	30.51
CDY47625	Canola	plasma membrane	29.81	29.0
CDX67503	Canola	cytosol, mitochondrion	16.46	27.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078GDH2	UniProt:A0A078GDH2
EnsemblPlants:CDY24545	ProteinID:CDY24545	ProteinID:CDY24545.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00026862001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF00069	PFAM:PF08263	PFscan:PS50011	PANTHER:PTHR27008
PANTHER:PTHR27008:SF40	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EE102A	SEG:seg	:	:	:	:

Description

BnaA01g22490DBnaA01g22490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDH2]

Coordinates

chrLK032160:-:549904..551905

Molecular Weight (calculated)

71164.4 Da

IEP (calculated)

8.164

GRAVY (calculated)

-0.169

Length

644 amino acids

Sequence
(BLAST)

001: MVPSCCFYAF FLLVITFYLV SPVRSSDVEA LLSLKSSIDP SNSIPWRGTD LCNWEGVKEC INGTRVSKLV LENLNLTGSL NEKSLNQLDQ LRVLSFKGNS
101: LNASVPNLSG LVNLKSLFLN DNNFSGEFPE SLTSLHRLKT IVLAGNRLSG QIPSSLLHLS HLYTLHLQDN LFSGSIPPLN QTTIRFLNVS NNQLSGPIPL
201: TQALKQFNES SFTGNIALCG DQIQNSSCRR VSSKPSAIPA MSIANKTKTK TKLIVIIVGS ISGGIVILLL ALLVLIRRQK LTKSKREECI SKAVGESDRA
301: TEGDRRNNKR FSWEKDEEGS SVGTLVFLGR GEPDTTAVRY SMDDLLKASA ETLGRGTIGS TYKAVMESGF IVTVKRLKDA AGFTRMEEFK RHVEILGRLK
401: HPNLVPLRAY FQAKEECLLV YDYFPNGSLF SLIHGIRVSG SGKPLHWTSC LKIAEDLAMG LVYIHQNPNL VHGNLKSSNV LLGPDFESCL TDYGLRDLHD
501: PQDTSAASLF YKAPECRDSR KETTQPSDVY SFGVLLLELL TGKTSSFHQH GSDISRWVRA VREAETESGE EMNSSEEKLE ALLSIATACV AVQPEKRPVM
601: REVLKMVKDA RAEAVVLSSY SSDYSPGRWS DTVQSFPRED HMSI

Best Arabidopsis Sequence Match ( AT1G60630.1 )
(BLAST)

001: MISSSSCMFF LVFAFFLISP VRSSDVEALL SLKSSIDPSN SIPWRGTDPC NWEGVKKCMK GRVSKLVLEN LNLSGSLNGK SLNQLDQLRV LSFKGNSLSG
101: SIPNLSGLVN LKSLYLNDNN FSGEFPESLT SLHRLKTVVL SRNRFSGKIP SSLLRLSRLY TFYVQDNLFS GSIPPLNQAT LRFFNVSNNQ LSGHIPPTQA
201: LNRFNESSFT DNIALCGDQI QNSCNDTTGI TSTPSAKPAI PVAKTRSRTK LIGIISGSIC GGILILLLTF LLICLLWRRK RSKSKREERR SKRVAESKEA
301: KTAETEEGTS DQKNKRFSWE KESEEGSVGT LVFLGRDITV VRYTMDDLLK ASAETLGRGT LGSTYKAVME SGFIITVKRL KDAGFPRMDE FKRHIEILGR
401: LKHPNLVPLR AYFQAKEECL LVYDYFPNGS LFSLIHGSKV SGSGKPLHWT SCLKIAEDLA MGLVYIHQNP GLTHGNLKSS NVLLGPDFES CLTDYGLSDL
501: HDPYSIEDTS AASLFYKAPE CRDLRKASTQ PADVYSFGVL LLELLTGRTS FKDLVHKYGS DISTWVRAVR EEETEVSEEL NASEEKLQAL LTIATACVAV
601: KPENRPAMRE VLKMVKDARA EAALFSFNSS DHSPGRWSDT IQSLPREDHM SI

Arabidopsis Description

Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 [Source:UniProtKB/Swiss-Prot;Acc:Q84MA9]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.