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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 8
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19849 Canola plasma membrane 97.75 97.75
AT5G24100.1 Thale cress plasma membrane 76.81 77.69
CDY47068 Canola plasma membrane 42.35 43.98
CDY54343 Canola plasma membrane 42.19 43.89
CDY03526 Canola cytosol 17.87 43.36
CDY38186 Canola plasma membrane 41.22 43.32
CDX94213 Canola plasma membrane 42.51 42.93
CDY08366 Canola plasma membrane 40.58 42.78
GSMUA_Achr5P06820_001 Banana plasma membrane 39.61 42.41
TraesCS3D01G156100.1 Wheat plasma membrane 43.16 42.14
TraesCS3B01G175300.1 Wheat plasma membrane 43.0 41.98
TraesCS3A01G148400.1 Wheat plasma membrane 42.67 41.8
CDY34407 Canola mitochondrion 22.87 41.76
CDY25569 Canola mitochondrion 22.71 41.72
GSMUA_Achr8P19840_001 Banana plasma membrane 31.88 41.42
CDX88667 Canola plasma membrane 40.9 40.64
CDY27986 Canola plasma membrane 40.9 40.25
CDY35996 Canola plasma membrane 41.06 40.16
KXG31530 Sorghum plasma membrane 42.83 39.88
Zm00001d008965_P001 Maize plasma membrane 42.83 39.58
CDY32713 Canola plasma membrane 41.22 39.32
CDX95816 Canola plasma membrane 37.36 39.32
CDY47625 Canola plasma membrane 41.87 39.27
Zm00001d039325_P001 Maize plasma membrane 41.55 39.27
CDX92167 Canola plasma membrane 39.45 39.26
CDY58565 Canola plasma membrane 41.22 39.2
CDY67567 Canola plasma membrane 36.55 38.94
CDY61284 Canola plasma membrane 39.61 38.92
CDX77054 Canola plasma membrane 38.65 38.9
CDY02808 Canola plastid 25.93 38.24
CDX98821 Canola plasma membrane 38.65 38.22
CDY48185 Canola plasma membrane 40.26 38.05
CDX70172 Canola plasma membrane 38.16 37.98
GSMUA_Achr10P... Banana plasma membrane 32.05 37.55
CDY04464 Canola plasma membrane 38.0 37.34
CDX77309 Canola plasma membrane 38.33 36.84
CDY35028 Canola mitochondrion 13.85 36.44
CDY41827 Canola plasma membrane 37.84 36.32
CDY51524 Canola plasma membrane 35.1 35.16
CDY28719 Canola plasma membrane 34.14 35.1
CDX84553 Canola plasma membrane 36.88 34.86
CDX67503 Canola cytosol, mitochondrion 21.42 34.64
CDY38103 Canola plasma membrane 33.98 34.42
GSMUA_Achr7P14210_001 Banana plasma membrane 31.24 34.4
CDY49655 Canola plasma membrane 34.14 34.36
CDX79688 Canola plasma membrane 35.59 34.32
CDX85498 Canola plasma membrane 33.82 34.26
CDX69441 Canola plasma membrane 33.82 33.98
CDX81508 Canola plasma membrane 35.1 33.69
CDY44903 Canola plasma membrane 32.69 33.66
CDY22372 Canola cytosol 15.62 32.88
CDX71488 Canola plasma membrane 38.49 32.69
CDX71536 Canola cytosol 15.46 32.54
CDY10964 Canola cytosol 7.57 32.41
HORVU3Hr1G030090.5 Barley cytosol 36.39 31.97
CDY34130 Canola cytosol, plastid 30.76 31.01
CDY24545 Canola plasma membrane 31.4 30.28
CDY19325 Canola plasma membrane 31.24 29.94
CDX97916 Canola plasma membrane 31.4 29.55
CDX81336 Canola plasma membrane 29.31 29.21
CDX71537 Canola extracellular 13.2 28.77
CDX68581 Canola plasma membrane 29.79 28.33
CDX83117 Canola plasma membrane 29.79 28.24
CDY01430 Canola plasma membrane 30.92 28.07
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078DIP0EnsemblPlants:CDX87143
ProteinID:CDX87143ProteinID:CDX87143.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00146056001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF07714PFAM:PF08263PFAM:PF13855ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF51InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDCB7ASEG:seg:
Description
BnaC09g04580D
Coordinates
chrLK031849:-:730942..733180
Molecular Weight (calculated)
69145.4 Da
IEP (calculated)
7.802
GRAVY (calculated)
-0.196
Length
621 amino acids
Sequence
(BLAST)
001: MSRRLSIFYS VLLLIFASPS LLSPVNGDLA GDRQALLDFL NNITHPRSLA WNASSPICAT WSGVTCNRDN TRVTALHLPG ASLLGTLPPG TISRLSELEI
101: LSLRSNGLRG PFPIDFLQLK KLKAITLSNN KFSGPLPSDY TTCMNLTVLD LFGNRFNGSI PSGLANLTGL LSLNLAENEF SGEIPDLNLP GLRRLNVSNN
201: NLTGSVPKSL KRFGHSSFSG NNLTYDDTSP PVGSPAQKEK EQEEDKHGIY ISEPAILGIV ITGCFLIFFV IAVLIIICYV KRKKRQETKP ETLTPAKANP
301: ETLPSEKEVS KSRKEMNIED MEEKSEFNKI VFFEGNNLAF NLEDLLTSSA EFLGKGTFGM TYKAVLGDAK VIAVKRFKDV SVSRKDFKHQ MEIVGNIRHE
401: NVAPLRAYVC SKEEKLMVYD YYPTGSLSVL LHGKNGKEDH VPLDWETRLR FLIGLAKGLA HLHTQHKLAH GNIKSSNVFL NSKRYGCISE TGLALLTNPV
501: IRADSSARTE LRYRAPEAYD TRRSTPESDI YGFGILMLET LSGRSSMDDK KEDIELVVWM NRVLAEQWTG EVFDLELVKT PNIEAKLLQM IDLVQLCTNR
601: VPAKRPEIAK VVEILEEIER E
Best Arabidopsis Sequence Match ( AT5G24100.1 )
(BLAST)
001: MSRGRSFIFY FVLFLFFGSS ALYSQVTGDL AGDRQALLDF LNNIIHPRSL AWNTSSPVCT TWPGVTCDID GTRVTALHLP GASLLGVIPP GTISRLSELQ
101: ILSLRSNGLR GPFPIDFLQL KKLKAISLGN NRFSGPLPSD YATWTNLTVL DLYSNRFNGS IPAGFANLTG LVSLNLAKNS FSGEIPDLNL PGLRRLNFSN
201: NNLTGSIPNS LKRFGNSAFS GNNLVFENAP PPAVVSFKEQ KKNGIYISEP AILGIAISVC FVIFFVIAVV IIVCYVKRQR KSETEPKPDK LKLAKKMPSE
301: KEVSKLGKEK NIEDMEDKSE INKVMFFEGS NLAFNLEDLL IASAEFLGKG VFGMTYKAVL EDSKVIAVKR LKDIVVSRKD FKHQMEIVGN IKHENVAPLR
401: AYVCSKEEKL MVYDYDSNGS LSLRLHGKNA DEGHVPLNWE TRLRFMIGVA KGLGHIHTQN LAHGNIKSSN VFMNSEGYGC ISEAGLPLLT NPVVRADSSA
501: RSVLRYRAPE VTDTRRSTPE SDIYSFGILM LETLTGRSIM DDRKEGIDLV VWVNDVISKQ WTGEVFDLEL VKTPNVEAKL LQMLQLGTSC TAMVPAKRPD
601: MVKVVETLEE IERD
Arabidopsis Description
Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At5g24100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.