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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70170
CDX73731
CDX75951
CDX77995
CDX80239
CDX80954
CDX83668
CDX88900
CDX92551
CDX95565
CDX98822
CDY02581
CDY13691
CDY13981
CDY28483
CDY32292
CDY34170
CDY47200
CDY51925
CDY52144
CDY59012
CDY59022
CDY59615

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G17840.1 CDX75951 AT3G17950.1 15618630
AT3G17840.1 CDX95565 AT3G17950.1 15618630
AT3G17840.1 CDY51925 AT3G17950.1 15618630
AT3G17840.1 CDX83668 AT3G27210.1 15618630
AT3G17840.1 CDY13691 AT3G27210.1 15618630
AT3G17840.1 CDY28483 AT3G27210.1 15618630
AT3G17840.1 CDY34170 AT3G27210.1 15618630
AT3G17840.1 CDX73731 AT3G51310.1 15618630
AT3G17840.1 CDX77995 AT3G51310.1 15618630
AT3G17840.1 CDY59615 AT3G51310.1 15618630
AT3G17840.1 CDX70170 AT5G05190.1 15618630
AT3G17840.1 CDX80954 AT5G05190.1 15618630
AT3G17840.1 CDX98822 AT5G05190.1 15618630
AT3G17840.1 CDY52144 AT5G05190.1 15618630
AT3G17840.1 CDX80239 AT5G19140.1 15618630
AT3G17840.1 CDX88900 AT5G19140.1 15618630
AT3G17840.1 CDX92551 AT5G19140.1 15618630
AT3G17840.1 CDY02581 AT5G19140.1 15618630
AT3G17840.1 CDY13981 AT5G19140.1 15618630
AT3G17840.1 CDY32292 AT5G19140.1 15618630
AT3G17840.1 CDY47200 AT5G19140.1 15618630
AT3G17840.1 CDY59012 AT5G19140.1 15618630
AT3G17840.1 CDY59022 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92167 Canola plasma membrane 94.41 89.26
CDY67567 Canola plasma membrane 80.0 80.96
CDY61284 Canola plasma membrane 85.42 79.75
AT3G17840.1 Thale cress plasma membrane 84.24 76.82
CDY41827 Canola plasma membrane 73.56 67.08
CDX77309 Canola plasma membrane 72.37 66.1
PGSC0003DMT400036789 Potato cytosol 35.42 65.11
KRH60559 Soybean endoplasmic reticulum 62.71 56.4
KRH41871 Soybean endoplasmic reticulum 61.36 55.78
VIT_17s0000g02010.t01 Wine grape plasma membrane 61.69 54.17
Solyc06g068910.2.1 Tomato plasma membrane 57.46 53.47
PGSC0003DMT400074103 Potato plasma membrane 57.97 52.78
Os03t0712400-02 Rice plasma membrane 19.83 52.0
GSMUA_Achr2P21610_001 Banana plasma membrane 52.88 51.57
GSMUA_Achr3P02160_001 Banana plasma membrane 41.86 51.35
GSMUA_Achr8P23000_001 Banana plasma membrane 47.29 50.54
Solyc03g118510.2.1 Tomato nucleus 56.61 50.53
GSMUA_Achr3P07440_001 Banana plasma membrane 44.07 50.19
KRH48661 Soybean nucleus 57.97 50.0
KRH39040 Soybean plasma membrane 54.58 49.24
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 46.95 49.2
GSMUA_Achr10P... Banana plasma membrane 47.8 48.96
CDX85498 Canola plasma membrane 49.83 47.96
CDY38103 Canola plasma membrane 49.66 47.8
CDX69441 Canola plasma membrane 49.83 47.57
CDY51524 Canola plasma membrane 49.83 47.42
CDY28719 Canola plasma membrane 48.47 47.35
CDY49655 Canola plasma membrane 49.49 47.33
GSMUA_Achr9P15690_001 Banana plasma membrane 44.92 47.32
Zm00001d048053_P001 Maize plasma membrane 53.56 47.23
TraesCS4B01G047100.1 Wheat plasma membrane 53.9 47.11
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 53.56 47.02
HORVU4Hr1G007550.1 Barley plasma membrane 53.22 47.01
GSMUA_Achr7P11160_001 Banana plasma membrane 42.54 47.0
TraesCS4D01G046900.1 Wheat plasma membrane 53.39 46.94
Os03t0223000-02 Rice plasma membrane 53.56 46.81
TraesCS4A01G267300.1 Wheat plasma membrane 52.88 46.36
EER95247 Sorghum plasma membrane 52.88 46.29
TraesCS4D01G241100.1 Wheat plasma membrane 52.71 46.21
CDY03526 Canola cytosol 19.83 45.7
TraesCS4A01G064200.1 Wheat plasma membrane 52.37 45.31
EER90996 Sorghum plasma membrane 53.05 44.97
Zm00001d033745_P001 Maize plasma membrane 52.88 44.96
TraesCS4B01G241500.1 Wheat plasma membrane 47.63 44.6
CDX77054 Canola plasma membrane 46.27 44.25
TraesCS2B01G344900.1 Wheat plasma membrane 49.32 43.63
TraesCS2D01G325900.1 Wheat plasma membrane 49.32 43.5
TraesCS2A01G337000.1 Wheat plasma membrane 49.15 43.35
KXG26481 Sorghum plasma membrane 48.98 43.01
CDY48185 Canola plasma membrane 47.8 42.92
Os04t0463000-01 Rice plasma membrane 48.64 42.9
CDY10964 Canola cytosol 10.51 42.76
Zm00001d013430_P001 Maize mitochondrion 52.37 42.68
TraesCS5D01G210800.1 Wheat plasma membrane 46.78 42.59
CDY04464 Canola plasma membrane 45.59 42.56
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 48.81 42.54
CDY02808 Canola plastid 30.34 42.52
Zm00001d020403_P001 Maize plasma membrane 46.1 42.43
TraesCS5B01G202900.1 Wheat plasma membrane 46.78 42.27
TraesCS7A01G214300.1 Wheat plasma membrane 45.76 42.12
TraesCS5A01G205500.1 Wheat plasma membrane 46.44 42.09
TraesCS7D01G216400.1 Wheat plasma membrane 45.59 41.97
HORVU0Hr1G012920.2 Barley cytosol 36.27 41.96
CDX88667 Canola plasma membrane 44.41 41.92
CDY34407 Canola mitochondrion 24.07 41.76
HORVU7Hr1G043470.2 Barley plasma membrane 45.25 41.72
CDY25569 Canola mitochondrion 23.9 41.72
TraesCS7B01G121600.1 Wheat plasma membrane 45.25 41.65
Os09t0400500-01 Rice plasma membrane 45.59 41.51
KXG35590 Sorghum plasma membrane 45.42 41.04
CDY27986 Canola plasma membrane 43.73 40.89
CDY35996 Canola plasma membrane 43.9 40.79
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 42.2 40.55
CDY58565 Canola plasma membrane 44.75 40.43
CDY35028 Canola mitochondrion 16.1 40.25
CDX98821 Canola plasma membrane 42.71 40.13
CDX70172 Canola plasma membrane 42.37 40.06
CDY32713 Canola plasma membrane 44.07 39.94
EES15012 Sorghum plasma membrane 43.9 39.54
HORVU4Hr1G066900.1 Barley plasma membrane 35.76 39.37
CDX94213 Canola plasma membrane 40.51 38.86
CDY08366 Canola plasma membrane 38.31 38.37
CDX84553 Canola plasma membrane 42.71 38.36
CDX79688 Canola plasma membrane 41.86 38.35
CDY38186 Canola plasma membrane 38.31 38.24
Zm00001d032244_P001 Maize plasma membrane 43.39 38.15
Os08t0427600-00 Rice golgi, plasma membrane 28.47 37.5
CDX87143 Canola plasma membrane 39.32 37.36
CDY47625 Canola plasma membrane 41.86 37.31
Zm00001d050355_P001 Maize plasma membrane 43.9 37.27
CDY19849 Canola plasma membrane 38.64 36.72
CDX81508 Canola plasma membrane 40.17 36.63
CDX71488 Canola plasma membrane 45.25 36.53
CDY22372 Canola cytosol 18.14 36.27
CDX67503 Canola cytosol, mitochondrion 23.56 36.2
CDY44903 Canola plasma membrane 36.95 36.15
CDY47068 Canola plasma membrane 36.44 35.95
CDX71536 Canola cytosol 17.97 35.93
CDY54343 Canola plasma membrane 36.27 35.85
CDX97916 Canola plasma membrane 35.59 31.82
CDY19325 Canola plasma membrane 34.58 31.48
CDY34130 Canola cytosol, plastid 32.71 31.33
CDY24545 Canola plasma membrane 33.39 30.59
CDX81336 Canola plasma membrane 32.2 30.5
CDX83117 Canola plasma membrane 33.73 30.38
CDX68581 Canola plasma membrane 33.22 30.02
CDY01430 Canola plasma membrane 32.88 28.36
CDX71537 Canola extracellular 11.69 24.21
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078E378EnsemblPlants:CDX95816
ProteinID:CDX95816ProteinID:CDX95816.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00101762001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF00069PFAM:PF08263PFAM:PF13855ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE43C8SEG:seg::
Description
BnaC05g35670D
Coordinates
chrLK031891:-:479942..481959
Molecular Weight (calculated)
63705.6 Da
IEP (calculated)
6.212
GRAVY (calculated)
-0.071
Length
590 amino acids
Sequence
(BLAST)
001: MSTLSLLLVL SILLLSLPPP SLQELAADKS ALLSLRSSLG GRTFLWNTKQ TSPCNWTGVS CDSDRVTALR LPGVALSGQI PEGIFGNLTN LRTLSLRLNA
101: LTGTLPLDLG SCSDLRRLYL QGNRFSGEIP ENLTRLKTLY LENNKLSGPL VDMGLGLDQF NVSNNLLNGS IPKSLQRFDS DSFLGTSLCG KPLGVCNNEG
201: TVPSQPISVG NIPGSDGKRE KGKLSGGAIA GIVIGCVVVF FVVVMILMAL FGNKKGSDRT RDKAAVEAAT ESGYEAAVTG NAEVNGSGTT RKLVFFGNAT
301: KVFELEDLLR ASAEVLGKGT FGTAYKAVLD AATMVAVKRL KDVTMADREF KEKIEVVGAM DHENLVPLRA YYYSGDEKLL VYDFMPIGSL SALLHGNKGA
401: GRSPLDWEVR SRIALGAARG LDYLHSQDPL TSHGNVKSSN ILLTNSHDAR LSDFGLAQLV GSSTTTTNRV TGYRAPEVTD PRRVSQKADV YSFGVVLLEL
501: LTGKAPSNSV MNEEGMDLAR WVHSVGKEAW RSEVFDSELM SLETVVEGEM EEMLQLGIEC TEQHPDKRPV MVEVVRRIQE LRQSGSDQVL
Best Arabidopsis Sequence Match ( AT3G17840.1 )
(BLAST)
001: MRLFFTPSMS NLSIFFSILL LSLPLPSIGD LAADKSALLS FRSAVGGRTL LWDVKQTSPC NWTGVLCDGG RVTALRLPGE TLSGHIPEGI FGNLTQLRTL
101: SLRLNGLTGS LPLDLGSCSD LRRLYLQGNR FSGEIPEVLF SLSNLVRLNL AENEFSGEIS SGFKNLTRLK TLYLENNKLS GSLLDLDLSL DQFNVSNNLL
201: NGSIPKSLQK FDSDSFVGTS LCGKPLVVCS NEGTVPSQPI SVGNIPGTVE GSEEKKKRKK LSGGAIAGIV IGCVVGLSLI VMILMVLFRK KGNERTRAID
301: LATIKHHEVE IPGEKAAVEA PENRSYVNEY SPSAVKAVEV NSSGMKKLVF FGNATKVFDL EDLLRASAEV LGKGTFGTAY KAVLDAVTLV AVKRLKDVTM
401: ADREFKEKIE VVGAMDHENL VPLRAYYYSG DEKLLVYDFM PMGSLSALLH GNKGAGRPPL NWEVRSGIAL GAARGLDYLH SQDPLSSHGN VKSSNILLTN
501: SHDARVSDFG LAQLVSASST TPNRATGYRA PEVTDPRRVS QKADVYSFGV VLLELLTGKA PSNSVMNEEG MDLARWVHSV AREEWRNEVF DSELMSIETV
601: VSVEEEMAEM LQLGIDCTEQ HPDKRPVMVE VVRRIQELRQ SGADRVG
Arabidopsis Description
RLK902Probable inactive receptor kinase RLK902 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVI6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.