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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU2Hr1G068780.1
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU3Hr1G094210.2
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G040970.1
HORVU5Hr1G044710.4
HORVU6Hr1G073560.1
HORVU7Hr1G081830.7

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT1G48480.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT1G48480.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G02880.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT3G02880.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT3G17840.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT3G17840.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT3G17840.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G17840.1 HORVU7Hr1G081830.7 AT3G51310.1 15618630
AT3G17840.1 HORVU5Hr1G040970.1 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G241500.1 Wheat plasma membrane 84.33 71.75
TraesCS4D01G241100.1 Wheat plasma membrane 83.58 66.57
TraesCS4A01G064200.1 Wheat plasma membrane 83.58 65.69
EER95247 Sorghum plasma membrane 75.56 60.09
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 75.19 59.97
Os03t0223000-02 Rice plasma membrane 75.19 59.7
Zm00001d048053_P001 Maize plasma membrane 74.44 59.64
GSMUA_Achr10P... Banana plasma membrane 47.95 44.62
GSMUA_Achr7P11160_001 Banana plasma membrane 41.04 41.2
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 42.54 40.5
HORVU4Hr1G007550.1 Barley plasma membrane 49.81 39.97
GSMUA_Achr2P21610_001 Banana plasma membrane 43.66 38.68
KRH41871 Soybean endoplasmic reticulum 46.64 38.52
Solyc11g011020.1.1 Tomato nucleus 45.71 38.16
KRH60559 Soybean endoplasmic reticulum 46.64 38.11
Solyc06g068910.2.1 Tomato plasma membrane 44.78 37.85
PGSC0003DMT400074103 Potato plasma membrane 45.71 37.81
PGSC0003DMT400040459 Potato plasma membrane 45.52 37.71
AT1G48480.1 Thale cress plasma membrane 46.08 37.71
Bra021277.1-P Field mustard plasma membrane 44.4 37.66
Bra014140.1-P Field mustard plasma membrane 44.78 37.62
CDX77309 Canola plasma membrane 45.34 37.62
CDY41827 Canola plasma membrane 45.34 37.56
Solyc03g118510.2.1 Tomato nucleus 46.27 37.52
VIT_14s0006g01080.t01 Wine grape plasma membrane 44.59 37.4
CDY61284 Canola plasma membrane 44.03 37.34
CDX92167 Canola plasma membrane 43.1 37.02
CDY67567 Canola plasma membrane 40.11 36.88
AT3G17840.1 Thale cress plasma membrane 44.4 36.79
Bra022250.1-P Field mustard plasma membrane 42.91 36.45
GSMUA_Achr3P02160_001 Banana plasma membrane 32.65 36.38
VIT_17s0000g02010.t01 Wine grape plasma membrane 45.52 36.31
Bra021408.1-P Field mustard plasma membrane 40.86 35.96
CDX95816 Canola plasma membrane 39.37 35.76
KRH17350 Soybean extracellular 41.6 35.74
CDY49655 Canola plasma membrane 41.04 35.66
Bra008611.1-P Field mustard plasma membrane 41.04 35.66
CDY38103 Canola plasma membrane 40.67 35.56
CDX69441 Canola plasma membrane 40.86 35.44
AT3G02880.1 Thale cress plasma membrane 41.42 35.41
Bra023574.1-P Field mustard plasma membrane 40.3 35.24
CDX85498 Canola plasma membrane 40.3 35.24
CDY51524 Canola plasma membrane 40.67 35.16
Bra040609.1-P Field mustard plasma membrane 40.67 34.99
KRH72980 Soybean extracellular 39.37 34.48
AT5G16590.1 Thale cress plasma membrane 40.11 34.4
CDY28719 Canola plasma membrane 38.43 34.11
KRH48661 Soybean nucleus 43.1 33.77
KRH39040 Soybean plasma membrane 40.49 33.18
HORVU3Hr1G080740.1 Barley plasma membrane 37.5 31.8
HORVU3Hr1G053300.1 Barley plasma membrane 38.99 31.19
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 35.45 30.94
PGSC0003DMT400036789 Potato cytosol 18.28 30.53
HORVU4Hr1G050770.1 Barley plasma membrane 36.01 30.3
HORVU5Hr1G007340.7 Barley plasma membrane 37.69 30.01
HORVU7Hr1G043470.2 Barley plasma membrane 35.82 30.0
HORVU2Hr1G017650.1 Barley plasma membrane 35.63 29.98
HORVU1Hr1G069510.6 Barley plasma membrane 35.26 29.44
HORVU3Hr1G089490.3 Barley plasma membrane 36.01 27.81
HORVU0Hr1G012920.2 Barley cytosol 26.31 27.65
HORVU6Hr1G094680.2 Barley plasma membrane 30.22 23.68
HORVU3Hr1G074930.2 Barley plasma membrane 27.61 22.77
HORVU3Hr1G067050.2 Barley plasma membrane 27.61 22.77
HORVU3Hr1G007120.2 Barley cytosol, peroxisome 32.46 22.25
HORVU5Hr1G041210.4 Barley plasma membrane 30.78 21.21
HORVU2Hr1G113540.1 Barley plastid 21.83 19.24
HORVU5Hr1G063050.3 Barley plasma membrane 16.42 18.8
HORVU3Hr1G030090.5 Barley cytosol 24.63 18.67
Protein Annotations
Gene3D:3.30.200.20Gene3D:3.80.10.10MapMan:50.2.7UniProt:A0A287PFD7GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU4Hr1G066900EnsemblPlants:HORVU4Hr1G066900.1InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF07714PFAM:PF08263
ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B47A3E0
SEG:seg:::::
Description
No Description!
Coordinates
chrchr4H:-:556036917..556041079
Molecular Weight (calculated)
55997.6 Da
IEP (calculated)
10.010
GRAVY (calculated)
0.006
Length
536 amino acids
Sequence
(BLAST)
001: MAAMPRPARL ALAVLALASV LPAYLSDDLN TDAQALEALR KAVGRSALPS WNSSTQTCQW QGVACENGRV VELRLPGAGL IGALPSGVLG NLTALRTLSL
101: RWNALTGPIP DDVSRMTELR AIYFQHNAFS GEVPASLYTL RNLVRVNIGH NKFSGEISPD FNKLNRLGSL ILDANDFSGE IPKLDLPTLE QFNVSYNKLN
201: GSIPHKLRKM PKDSFLGTGL CGGPLGLCPG ETAETPAGSP GAQPGGGGAA ADVGRGKKKL SGGAIAGIAI ACVFGLLLLL ALLFFLCRKK SGSAQRSTAA
301: VEKGRDLGMG PLDAAEPKGQ NGNGVHGGAA AAAAAGAVPA AVAAAAKSGG STAGSKKLIY FGPMAAAPPF DLEDLLRASA EVLGKGAFGT AYKAVMESGA
401: AVAVKRLKDV DLPEPEFRER IAAIGAVQHE LVVPLRAYYF SKDEKLLVYD YMSMGSLSAL LHGKKQRKKN NSLLFFTTFI YSGFAPGRFV IRAAVVSVDR
501: PEQAGDIPSP ARKKSNQGRG ESGAGSLSPD PFRFPF
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.