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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02880.1 VIT_06s0009g01910.t01 AT2G41090.1 17360592
AT3G02880.1 VIT_08s0040g00470.t01 AT2G41090.1 17360592
AT3G02880.1 VIT_06s0009g01910.t01 AT5G21274.1 17360592
AT3G02880.1 VIT_08s0040g00470.t01 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_17s0000g02010.t01 Wine grape plasma membrane 69.95 66.52
Os03t0712400-02 Rice plasma membrane 23.16 65.78
Solyc11g011020.1.1 Tomato nucleus 63.54 63.24
PGSC0003DMT400040459 Potato plasma membrane 63.69 62.91
GSMUA_Achr10P... Banana plasma membrane 55.4 61.46
KRH17350 Soybean extracellular 59.94 61.38
KRH72980 Soybean extracellular 57.75 60.29
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 52.58 59.68
GSMUA_Achr2P21610_001 Banana plasma membrane 56.49 59.67
GSMUA_Achr3P07440_001 Banana plasma membrane 48.04 59.27
Bra021408.1-P Field mustard plasma membrane 55.71 58.46
GSMUA_Achr3P02160_001 Banana plasma membrane 43.35 57.59
CDY49655 Canola plasma membrane 55.09 57.05
CDY38103 Canola plasma membrane 54.62 56.93
CDX85498 Canola plasma membrane 54.46 56.77
Bra023574.1-P Field mustard plasma membrane 54.46 56.77
Bra008611.1-P Field mustard plasma membrane 54.77 56.73
Zm00001d048053_P001 Maize plasma membrane 59.31 56.65
CDX69441 Canola plasma membrane 54.62 56.47
GSMUA_Achr8P23000_001 Banana plasma membrane 48.67 56.34
CDY28719 Canola plasma membrane 53.21 56.29
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 59.15 56.25
EER95247 Sorghum plasma membrane 59.31 56.23
TraesCS4D01G241100.1 Wheat plasma membrane 59.15 56.17
GSMUA_Achr7P11160_001 Banana plasma membrane 46.79 55.99
Os03t0223000-02 Rice plasma membrane 58.53 55.41
CDY51524 Canola plasma membrane 53.68 55.32
AT3G02880.1 Thale cress plasma membrane 54.15 55.18
TraesCS4A01G064200.1 Wheat plasma membrane 58.84 55.13
Bra040609.1-P Field mustard plasma membrane 53.68 55.06
AT5G16590.1 Thale cress plasma membrane 53.83 55.04
GSMUA_Achr9P15690_001 Banana plasma membrane 46.95 53.57
HORVU4Hr1G007550.1 Barley plasma membrane 54.46 52.1
TraesCS4B01G241500.1 Wheat plasma membrane 51.33 52.06
TraesCS4D01G046900.1 Wheat plasma membrane 54.46 51.86
TraesCS4B01G047100.1 Wheat plasma membrane 54.46 51.56
VIT_01s0011g05580.t01 Wine grape plasma membrane 48.04 51.42
TraesCS4A01G267300.1 Wheat plasma membrane 53.52 50.82
EER90996 Sorghum plasma membrane 54.15 49.71
Zm00001d033745_P001 Maize plasma membrane 53.36 49.14
Os04t0463000-01 Rice plasma membrane 51.17 48.88
VIT_06s0004g08210.t01 Wine grape plasma membrane 48.67 48.82
VIT_11s0016g04570.t01 Wine grape plasma membrane 48.98 47.93
KXG26481 Sorghum plasma membrane 50.23 47.77
VIT_08s0040g00060.t01 Wine grape plasma membrane 47.1 47.48
TraesCS2B01G344900.1 Wheat plasma membrane 49.45 47.38
TraesCS2A01G337000.1 Wheat plasma membrane 49.45 47.23
TraesCS2D01G325900.1 Wheat plasma membrane 49.3 47.09
TraesCS5A01G205500.1 Wheat plasma membrane 47.57 46.7
Zm00001d013430_P001 Maize mitochondrion 52.9 46.69
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 49.45 46.68
TraesCS5D01G210800.1 Wheat plasma membrane 47.1 46.45
TraesCS5B01G202900.1 Wheat plasma membrane 47.1 46.09
TraesCS7A01G214300.1 Wheat plasma membrane 46.01 45.87
TraesCS7D01G216400.1 Wheat plasma membrane 45.85 45.71
HORVU0Hr1G012920.2 Barley cytosol 36.46 45.69
TraesCS7B01G121600.1 Wheat plasma membrane 45.38 45.24
HORVU7Hr1G043470.2 Barley plasma membrane 45.23 45.16
Os09t0400500-01 Rice plasma membrane 45.7 45.06
Zm00001d020403_P001 Maize plasma membrane 45.07 44.93
HORVU4Hr1G066900.1 Barley plasma membrane 37.4 44.59
KXG35590 Sorghum plasma membrane 45.38 44.41
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 42.57 44.3
EES15012 Sorghum plasma membrane 45.07 43.97
VIT_01s0011g03860.t01 Wine grape plasma membrane 45.85 43.67
VIT_16s0050g02430.t01 Wine grape plasma membrane 42.88 43.63
VIT_02s0025g01040.t01 Wine grape plasma membrane 42.1 42.83
Os08t0427600-00 Rice golgi, plasma membrane 29.73 42.41
Zm00001d032244_P001 Maize plasma membrane 44.29 42.18
Zm00001d050355_P001 Maize plasma membrane 44.29 40.72
VIT_08s0007g04150.t01 Wine grape plasma membrane 42.88 40.12
VIT_04s0008g01220.t01 Wine grape plasma membrane 35.37 37.17
VIT_01s0010g01660.t01 Wine grape plasma membrane 36.15 35.38
VIT_07s0031g00120.t01 Wine grape plasma membrane 33.02 31.45
VIT_18s0001g10070.t01 Wine grape plasma membrane 31.77 30.66
Protein Annotations
Gene3D:1.10.510.10EntrezGene:100267283wikigene:100267283MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10
EMBL:AM427561ProteinID:CAN82203ProteinID:CAN82203.1ProteinID:CCB57634ProteinID:CCB57634.1UniProt:F6HSJ4
EMBL:FN596245GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfEntrezGene:LOC100267283wikigene:LOC100267283InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfPFAM:PF07714PFAM:PF08263ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008
PANTHER:PTHR27008:SF19InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTMTIGR:TC62915TMHMM:TMhelixUniParc:UPI00015C990EArrayExpress:VIT_14s0006g01080EnsemblPlantsGene:VIT_14s0006g01080
EnsemblPlants:VIT_14s0006g01080.t01unigene:Vvi.12947RefSeq:XP_002276147RefSeq:XP_002276147.1SEG:seg:
Description
No Description!
Coordinates
chr14:+:16192812..16195941
Molecular Weight (calculated)
69334.3 Da
IEP (calculated)
7.599
GRAVY (calculated)
-0.044
Length
639 amino acids
Sequence
(BLAST)
001: MKPFHFLLFF TFSSLILLPT GKSDLASERA ALLVLRSAVG GRSLLWNVSQ STPCLWVGVK CQQNRVVELR LPGMGLSGQL PAGSIGNLTE LHTLSLRFNA
101: LSGSVPPDLA SCVNLRNLYL QGNFFSGDIP EFLFTLSNLI RLNLAGNNFS GEISSDFNKL TRLGTLYLND NHLTGSIPKL NLNLQQFNVS NNQLDGSIPS
201: KLSNFPATAF QGNSLCGGPL QSCPHKSKLS GGAIAGIIIG SVVAFVLILV VLILLCRKKS SKKTGSTDVA PVKHTETEML GEKSVGDGDS TSMGYPIRGA
301: AVLAAAATSK GSGDKRLVFF RNSNRIFDLE DLLRASAEVL GKGTFGTAYK ASLDMEVERV VVAVKRLKDV SVSEKEFREK IEIAGAMDHE NLVPLRAYYY
401: SKDEKLIVYD YMPMGSLSAL LHGNRGAGRT PLNWEARSGI ALGAARGIAY IHSRGSASSH GNIKSSNILL TKSYEARVSD FGLAHLVGPT ATPNRVAGYR
501: APEVTDARKV SQKADVYSFG VLLLELLTGK APTHALLNEE GVDLPRWVQS VVREEWTAEV FDLELLRYQN VEEEMVQLLQ LALDCAAQYP DKRPSMLDVT
601: SRIEELCRSS SQHEQEPDHN IINDVHSVDS GAPVPSVVD
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.