Factsheet for VIT_16s0050g02430.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01040.t01	Wine grape	plasma membrane	68.63	68.63
KRH18126	Soybean	plasma membrane	62.42	66.33
KRH15987	Soybean	plasma membrane	65.76	66.29
PGSC0003DMT400023418	Potato	plasma membrane	65.92	66.24
KRH64513	Soybean	plasma membrane	66.08	65.56
KRH53424	Soybean	plasma membrane	64.33	63.82
GSMUA_Achr8P19840_001	Banana	plasma membrane	44.27	58.16
GSMUA_Achr5P06820_001	Banana	plasma membrane	51.43	55.69
TraesCS3D01G156100.1	Wheat	plasma membrane	56.05	55.35
TraesCS3A01G148400.1	Wheat	plasma membrane	55.73	55.2
TraesCS3B01G175300.1	Wheat	plasma membrane	55.57	54.87
GSMUA_Achr10P...	Banana	plasma membrane	45.54	53.96
KXG31530	Sorghum	plasma membrane	56.85	53.52
GSMUA_Achr7P14210_001	Banana	plasma membrane	47.61	53.01
VIT_06s0004g08210.t01	Wine grape	plasma membrane	53.5	52.75
Zm00001d008965_P001	Maize	plasma membrane	55.73	52.08
Zm00001d039325_P001	Maize	plasma membrane	53.66	51.29
VIT_08s0040g00060.t01	Wine grape	plasma membrane	49.36	48.9
VIT_11s0016g04570.t01	Wine grape	plasma membrane	48.57	46.71
HORVU3Hr1G030090.5	Barley	cytosol	49.04	43.56
VIT_14s0006g01080.t01	Wine grape	plasma membrane	43.63	42.88
VIT_01s0011g03860.t01	Wine grape	plasma membrane	42.68	39.94
VIT_01s0011g05580.t01	Wine grape	plasma membrane	37.74	39.7
VIT_08s0007g04150.t01	Wine grape	plasma membrane	42.36	38.95
VIT_17s0000g02010.t01	Wine grape	plasma membrane	41.56	38.84
VIT_04s0008g01220.t01	Wine grape	plasma membrane	34.55	35.69
VIT_01s0010g01660.t01	Wine grape	plasma membrane	34.55	33.23
VIT_07s0031g00120.t01	Wine grape	plasma membrane	32.48	30.4
VIT_18s0001g10070.t01	Wine grape	plasma membrane	30.57	29.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100243368	wikigene:100243368	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB47765	ProteinID:CCB47765.1	UniProt:F6H6G3	EMBL:FN595243	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100243368	wikigene:LOC100243368	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF00560	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF51	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00019857AB	ArrayExpress:VIT_16s0050g02430
EnsemblPlantsGene:VIT_16s0050g02430	EnsemblPlants:VIT_16s0050g02430.t01	unigene:Vvi.15950	RefSeq:XP_002267446	RefSeq:XP_002267446.2	RefSeq:XP_010662595.1
RefSeq:XP_010662596.1	RefSeq:XP_010662597.1	RefSeq:XP_010662598.1	RefSeq:XP_019081753.1	RefSeq:XP_019081754.1	SEG:seg

Description

No Description!

Coordinates

chr16:-:19365864..19368456

Molecular Weight (calculated)

68907.6 Da

IEP (calculated)

7.903

GRAVY (calculated)

-0.139

Length

628 amino acids

Sequence
(BLAST)

001: MGVKSIFSII FLLGTISFQG FAEPVEDKQA LLDFLNNINH SRTLNWNEYS SVCNTWTGVT CSGDHSRVIA LHLPGIGFRG EIPPNTLGQL SAVQILSLRS
101: NAITSPFPSD FSKLENLTAL YLQYNKFSGP LPIDFSVWKN LTIINLSNNG FNGSIPSSIS KLTHLAALDL ANNSLSGEIP DLNTSSLQHI NLSNNLLNGT
201: LPQSLRRFPN WAFSGNNIST ENAIPPVFPP NNPPLRKSKK LSEPALLGII LGGSVVGFVL FALLMIVCYS KRDRETGFIV KSQKGEGSVK KTVSGSHDGS
301: NRLVFFEGCS FAFDLEDLLR ASAEVLGKGT FGTTYKAALE DATTLVVKRL KEVSLVRRDF EQQMQIVGQI RHENVAPLRA YYYSKDEKLM VYDFYGQGSV
401: SSILHGRRGD GRVSLDWETR LRIALGAARG IAHIHTENGG KLVHGNIKAS NIFLNSRRYG CVSDLGLGTL MTPTPMPMTR AAGYRAPEVT DTRKASQASD
501: VYSFGVLLLE LLTGKSPIHN TGGDEVIHLV RWVNSVVREE WTAEVFDVEL LRYPNIEEEM VEMLQIGMNC VVKMPEQRPK MAEVVKMMES IQQVNTGNRP
601: SSETKSEVSS STPTPPAAAE MGSSSAQQ

Best Arabidopsis Sequence Match ( AT4G23740.2 )
(BLAST)

001: MEALRIYLWS LCLSLCLIIY GANSDPLEDK RALLEFLTIM QPTRSLNWNE TSQVCNIWTG VTCNQDGSRI IAVRLPGVGL NGQIPPNTIS RLSALRVLSL
101: RSNLISGEFP KDFVELKDLA FLYLQDNNLS GPLPLDFSVW KNLTSVNLSN NGFNGTIPSS LSRLKRIQSL NLANNTLSGD IPDLSVLSSL QHIDLSNNYD
201: LAGPIPDWLR RFPFSSYTGI DIIPPGGNYT LVTPPPPSEQ THQKPSKARF LGLSETVFLL IVIAVSIVVI TALAFVLTVC YVRRKLRRGD GVISDNKLQK
301: KGGMSPEKFV SRMEDVNNRL SFFEGCNYSF DLEDLLRASA EVLGKGTFGT TYKAVLEDAT SVAVKRLKDV AAGKRDFEQQ MEIIGGIKHE NVVELKAYYY
401: SKDEKLMVYD YFSRGSVASL LHGNRGENRI PLDWETRMKI AIGAAKGIAR IHKENNGKLV HGNIKSSNIF LNSESNGCVS DLGLTAVMSP LAPPISRQAG
501: YRAPEVTDTR KSSQLSDVYS FGVVLLELLT GKSPIHTTAG DEIIHLVRWV HSVVREEWTA EVFDIELLRY TNIEEEMVEM LQIAMSCVVK AADQRPKMSD
601: LVRLIENVGN RRTSIEPEPE LKPKSENGAS ETSTPSEI

Arabidopsis Description

Probable inactive receptor kinase At4g23740 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.