Factsheet for PGSC0003DMT400023418

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g02430.t01	Wine grape	plasma membrane	66.24	65.92
KRH64513	Soybean	plasma membrane	62.56	61.77
KRH18126	Soybean	plasma membrane	58.4	61.76
KRH15987	Soybean	plasma membrane	61.28	61.48
KRH53424	Soybean	plasma membrane	61.76	60.98
PGSC0003DMT400032061	Potato	plasma membrane	59.04	57.48
GSMUA_Achr8P19840_001	Banana	plasma membrane	42.56	55.65
GSMUA_Achr5P06820_001	Banana	plasma membrane	51.52	55.52
TraesCS3D01G156100.1	Wheat	plasma membrane	55.2	54.25
TraesCS3A01G148400.1	Wheat	plasma membrane	54.88	54.1
TraesCS3B01G175300.1	Wheat	plasma membrane	54.88	53.93
GSMUA_Achr10P...	Banana	plasma membrane	43.84	51.7
Zm00001d008965_P001	Maize	plasma membrane	55.52	51.64
KXG31530	Sorghum	plasma membrane	54.88	51.42
GSMUA_Achr7P14210_001	Banana	plasma membrane	45.76	50.71
Zm00001d039325_P001	Maize	plasma membrane	53.12	50.53
PGSC0003DMT400078299	Potato	plasma membrane	50.72	50.4
PGSC0003DMT400036789	Potato	cytosol	24.64	47.98
PGSC0003DMT400013468	Potato	plasma membrane	47.84	47.09
PGSC0003DMT400046218	Potato	plasma membrane	48.96	46.93
PGSC0003DMT400070937	Potato	plasma membrane	44.32	46.79
PGSC0003DMT400039213	Potato	plasma membrane	48.48	45.98
HORVU3Hr1G030090.5	Barley	cytosol	48.32	42.72
PGSC0003DMT400040459	Potato	plasma membrane	44.0	42.5
PGSC0003DMT400037779	Potato	plasma membrane	43.36	40.27
PGSC0003DMT400074103	Potato	plasma membrane	41.12	39.66
PGSC0003DMT400006944	Potato	plasma membrane	41.6	38.46
PGSC0003DMT400008826	Potato	plasma membrane	36.16	37.42
PGSC0003DMT400050673	Potato	plasma membrane	35.68	35.06
PGSC0003DMT400020520	Potato	plasma membrane	32.96	30.7
PGSC0003DMT400025493	Potato	plasma membrane	32.0	30.08
PGSC0003DMT400068804	Potato	plasma membrane	33.44	25.74

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1AIB6
PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400009068	PGSC:PGSC0003DMG400009068	EnsemblPlants:PGSC0003DMT400023418
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF51	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002958253	SEG:seg

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009068]

Coordinates

chr3:-:49019230..49021822

Molecular Weight (calculated)

68074.6 Da

IEP (calculated)

8.213

GRAVY (calculated)

-0.074

Length

625 amino acids

Sequence
(BLAST)

001: MATKFLFFSV LFCTALFWLA SSEPYEDKEA LLDFLNNVNH TRNLNWDERT SACSSWTGVT CNHDKSRIIA IRLPGVGFRG SIPGNTLSRL SDLQILSLRS
101: NSFSGSLPTD FAKLGNLTSI YLQSNNFQGP LPADFSAWKS LSVLNLSNND FSGSIPSSIS NLTHLTALVL ANNSLSGSIP DLNLPSLQIL DLSNNNFTGS
201: IPNSLQRFPG SAFAGNQLSP ANFSPSFPPV PPPSVPPKKK SFKLREPAIL GIVIGGCVLG FLVVAAVLIM CFSKKEGKSG ATEKSIKKED IVRKGVSSSQ
301: HGVGNLAFFE GCNLAFDLED LLRASAEVLG KGTFGTTYKA ALEDSTTVVV KRLKESVGRK DFEQQMEVVG NIRHENVAPL RAYYYSKDEK LMVYDFYSQG
401: SASLMLHAKR SADRVPLDWE TRLRIAIGAA RGIAQIHGQS GGRLVHGNIK SSNIFLNSQG FGCISDLGLA TIMGPIATPI VRAAGYQPPE VTDSRKVSQT
501: TDVYSFGVLI LELLTGKSPT HATGTSDIVH LVRWVHSVVR EEWTAEVFDV ELLRYPNIEE EMVEMLQIGL TCVSRMPEQR PKMTEVVKMV EGVRRVNTGT
601: RTSTEASTPN LTPPMTEIGS SSITH

Best Arabidopsis Sequence Match ( AT4G23740.2 )
(BLAST)

001: MEALRIYLWS LCLSLCLIIY GANSDPLEDK RALLEFLTIM QPTRSLNWNE TSQVCNIWTG VTCNQDGSRI IAVRLPGVGL NGQIPPNTIS RLSALRVLSL
101: RSNLISGEFP KDFVELKDLA FLYLQDNNLS GPLPLDFSVW KNLTSVNLSN NGFNGTIPSS LSRLKRIQSL NLANNTLSGD IPDLSVLSSL QHIDLSNNYD
201: LAGPIPDWLR RFPFSSYTGI DIIPPGGNYT LVTPPPPSEQ THQKPSKARF LGLSETVFLL IVIAVSIVVI TALAFVLTVC YVRRKLRRGD GVISDNKLQK
301: KGGMSPEKFV SRMEDVNNRL SFFEGCNYSF DLEDLLRASA EVLGKGTFGT TYKAVLEDAT SVAVKRLKDV AAGKRDFEQQ MEIIGGIKHE NVVELKAYYY
401: SKDEKLMVYD YFSRGSVASL LHGNRGENRI PLDWETRMKI AIGAAKGIAR IHKENNGKLV HGNIKSSNIF LNSESNGCVS DLGLTAVMSP LAPPISRQAG
501: YRAPEVTDTR KSSQLSDVYS FGVVLLELLT GKSPIHTTAG DEIIHLVRWV HSVVREEWTA EVFDIELLRY TNIEEEMVEM LQIAMSCVVK AADQRPKMSD
601: LVRLIENVGN RRTSIEPEPE LKPKSENGAS ETSTPSEI

Arabidopsis Description

Probable inactive receptor kinase At4g23740 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.