Factsheet for PGSC0003DMT400008826

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067020.2.1	Tomato	plasma membrane	91.72	91.57
VIT_01s0011g05580.t01	Wine grape	plasma membrane	52.98	53.6
PGSC0003DMT400036789	Potato	cytosol	27.65	52.02
PGSC0003DMT400040459	Potato	plasma membrane	49.5	46.21
PGSC0003DMT400074103	Potato	plasma membrane	49.5	46.14
PGSC0003DMT400039213	Potato	plasma membrane	43.71	40.06
PGSC0003DMT400046218	Potato	plasma membrane	43.21	40.03
PGSC0003DMT400078299	Potato	plasma membrane	41.39	39.75
PGSC0003DMT400070937	Potato	plasma membrane	38.24	39.02
PGSC0003DMT400013468	Potato	plasma membrane	40.89	38.9
PGSC0003DMT400023418	Potato	plasma membrane	37.42	36.16
PGSC0003DMT400032061	Potato	plasma membrane	37.75	35.51
PGSC0003DMT400037779	Potato	plasma membrane	39.07	35.07
PGSC0003DMT400006944	Potato	plasma membrane	38.24	34.17
PGSC0003DMT400050673	Potato	plasma membrane	34.44	32.7
PGSC0003DMT400025493	Potato	plasma membrane	32.95	29.92
PGSC0003DMT400020520	Potato	plasma membrane	32.95	29.66
PGSC0003DMT400068804	Potato	plasma membrane	35.93	26.72

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0ZV54
PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400003429	PGSC:PGSC0003DMG400003429
EnsemblPlants:PGSC0003DMT400008826	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF19	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029495ED
SEG:seg	:	:	:	:	:

Description

Atypical receptor-like kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400003429]

Coordinates

chr00:-:29540106..29542781

Molecular Weight (calculated)

66853.1 Da

IEP (calculated)

6.250

GRAVY (calculated)

-0.037

Length

604 amino acids

Sequence
(BLAST)

001: MSSSHFLSFL FLSLLISGIF SDLNADRAAL LHLSAAIKGR TLRWNTTNST PCSWEGVECD TTINRVIELR LPGYGLSGEM PLNSIGNLTE LRTLSLRSNS
101: LSGLLPSDIG SCTELRILNL ENNDFSGSIP TTFFNLNNLI RVSFSGNRIS GEISDAFNNL TRMRTLYLEN NNFSGSLPDL KNLSQLNEFN VSFNRLTGSI
201: PSSLGRFLAS SFLGNSLCGS AFSLSPCPEN NSLTSQSDKL SGGAIAGIVI GSIIGLFILL LVLFMLVRSI YRSRKSFRQV NVSPTPNQVL SSPHDSIVTE
301: NHDIENVFSE RKVCEDRTKG MVFFGESFEL FSLEDLLMAS AEVLGKGATG TTYKAYLDRD VEVVVKRLRN VCVLEEEFRG KVEQLGGISH GNLVPLRAYY
401: YGRDEKLVVY DSMPTSLYAV LHGEGKEALT WVIRSRIALG VANGIEYLHS LGLKVTHGNI KSSNILLTHY YDAYLSEFGI TQLISSTSNS KMTGYYAPEV
501: TDIRNVSQKA DVYSFGTILL ELLTGKNPSS VINDEGIDLP KWVKCIVEER GTTQVFDPEL IRFQNCDEEQ MVSLLHLAIS CTSHHPERRP PMADTTRRIK
601: EIVM

Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)

001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD

Arabidopsis Description

RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.