Factsheet for PGSC0003DMT400050673

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 8
endoplasmic reticulum 4
vacuole 4
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g069960.1.1	Tomato	plasma membrane	93.87	94.02
VIT_04s0008g01220.t01	Wine grape	plasma membrane	50.94	53.29
PGSC0003DMT400036789	Potato	cytosol	21.23	42.06
PGSC0003DMT400037779	Potato	plasma membrane	41.51	39.23
PGSC0003DMT400070937	Potato	plasma membrane	35.22	37.84
PGSC0003DMT400013468	Potato	plasma membrane	37.58	37.64
PGSC0003DMT400006944	Potato	plasma membrane	39.94	37.57
PGSC0003DMT400039213	Potato	plasma membrane	38.36	37.03
PGSC0003DMT400078299	Potato	plasma membrane	36.48	36.88
PGSC0003DMT400046218	Potato	plasma membrane	37.42	36.5
TraesCS3A01G250300.1	Wheat	plasma membrane	36.32	35.87
PGSC0003DMT400040459	Potato	plasma membrane	36.48	35.86
TraesCS3B01G279800.1	Wheat	plasma membrane	36.16	35.71
PGSC0003DMT400023418	Potato	plasma membrane	35.06	35.68
Os01t0711200-01	Rice	plasma membrane	36.79	35.67
Zm00001d011707_P001	Maize	plasma membrane	36.48	35.64
TraesCS3D01G250700.1	Wheat	plasma membrane	36.16	35.33
HORVU3Hr1G074930.2	Barley	plasma membrane	35.85	35.08
HORVU3Hr1G067050.2	Barley	plasma membrane	35.85	35.08
KXG33230	Sorghum	plasma membrane	36.16	34.85
PGSC0003DMT400074103	Potato	plasma membrane	35.38	34.72
PGSC0003DMT400008826	Potato	plasma membrane	32.7	34.44
PGSC0003DMT400032061	Potato	plasma membrane	33.8	33.49
PGSC0003DMT400020520	Potato	plasma membrane	31.76	30.1
PGSC0003DMT400025493	Potato	plasma membrane	30.35	29.02
PGSC0003DMT400068804	Potato	plasma membrane	34.28	26.85

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102582916	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1BQN6	PFAM:PF00069	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG401019681
PGSC:PGSC0003DMG401019681	EnsemblPlants:PGSC0003DMT400050673	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF26
InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI000295D938
RefSeq:XP_006340414.1	SEG:seg	:	:	:	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG401019681]

Coordinates

chr11:-:42283953..42287290

Molecular Weight (calculated)

71931.9 Da

IEP (calculated)

9.659

GRAVY (calculated)

-0.190

Length

636 amino acids

Sequence
(BLAST)

001: MAALFPNQFS LSKILSLSLF ISIFFFTISH SDDFSALLAF KSRADTSNFL TSWSRNAPCS SWIGVKCHPI TRRVVKIVLN HLNLTGSIHP LIHLTQIRHL
101: SLHHNSLSSI PNFDFWPNLK HVYLSNNKFS GEFPPGIYLL KRLRRLDLSF NEFSGEIPVK ELNQLPHLMT LRLEFNSLSG SLGADEKKTV ASVKEFNVSG
201: NNFSGKIPNW LSKFPVAAFA GNVRLCGYPL RTICPSETVD SNPTVMNTPN SQFNFLNQRK KNLSENMFLL IVTLDAIGVM MTVLVITWCC YYRKKNQESE
301: IDRLRKTNRK YNNQDTSSSS LYHSFEYGIK KTSDQFATMV CFEGCKGFNK VDDLLKASAE MLGKGSVGTS YKVAILDNGD VVVVKRVIEK LKKMKDVDGF
401: LRLIGNLRHT NVVPLRAYYS SKEELLLVYD FLPNGSLHNL LHGNRGPGRT PLDWTTRLKY ALGAAKGLSF LHSYNKTKIC HGNFTSSNIL IDHNGNACIS
501: DICLHLLLQM PISSNNGYKA PELSTQNNVN TNQNPRKFSQ KSDVYSFGVV LLEILTGKIA TSERETSLAK WIQSVVNKEW TWDVFDFELA RYKEREDEMV
601: ALLKVAMACL VSSPKDRPKM IVVEEMIEDI AKKENK

Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)

001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.