Factsheet for PGSC0003DMT400025493

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g093100.2.1	Tomato	plasma membrane	96.54	96.4
VIT_07s0031g00120.t01	Wine grape	plasma membrane	65.56	64.98
KRH04550	Soybean	plasma membrane	57.59	58.74
KRH57812	Soybean	golgi, plasma membrane, plastid	56.39	58.23
CDX81336	Canola	plasma membrane	52.63	56.18
Bra012141.1-P	Field mustard	plasma membrane	56.84	55.26
CDY01430	Canola	plasma membrane	56.69	55.12
AT5G67200.1	Thale cress	plasma membrane	55.19	54.86
CDX83117	Canola	plasma membrane	52.03	52.82
CDX68581	Canola	plasma membrane	51.43	52.37
PGSC0003DMT400020520	Potato	plasma membrane	52.63	52.16
GSMUA_Achr4P09880_001	Banana	plasma membrane	46.17	50.83
AT3G50230.2	Thale cress	plasma membrane	50.98	50.45
Bra029997.1-P	Field mustard	plastid	36.69	49.9
GSMUA_Achr7P20790_001	Banana	plasma membrane	42.41	48.04
GSMUA_Achr10P...	Banana	golgi, plasma membrane	43.16	44.63
KXG27266	Sorghum	plasma membrane	45.26	42.94
GSMUA_Achr9P25250_001	Banana	plastid	41.65	42.88
TraesCS2D01G513900.1	Wheat	plasma membrane	44.96	42.71
TraesCS2B01G540400.2	Wheat	plasma membrane	44.96	42.71
Zm00001d002068_P001	Maize	plasma membrane	44.66	42.37
TraesCS2A01G512500.1	Wheat	plasma membrane	44.96	42.35
HORVU2Hr1G113540.1	Barley	plastid	38.65	42.27
Os04t0649700-01	Rice	plasma membrane	45.11	42.25
PGSC0003DMT400013468	Potato	plasma membrane	32.93	34.49
PGSC0003DMT400036789	Potato	cytosol	16.54	34.27
PGSC0003DMT400070937	Potato	plasma membrane	30.08	33.78
PGSC0003DMT400068804	Potato	plasma membrane	40.9	33.5
PGSC0003DMT400046218	Potato	plasma membrane	32.78	33.44
PGSC0003DMT400078299	Potato	plasma membrane	31.58	33.39
PGSC0003DMT400008826	Potato	plasma membrane	29.92	32.95
PGSC0003DMT400037779	Potato	plasma membrane	33.23	32.84
PGSC0003DMT400006944	Potato	plasma membrane	33.23	32.69
PGSC0003DMT400039213	Potato	plasma membrane	32.33	32.63
PGSC0003DMT400023418	Potato	plasma membrane	30.08	32.0
PGSC0003DMT400074103	Potato	plasma membrane	30.53	31.33
PGSC0003DMT400040459	Potato	plasma membrane	30.23	31.07
PGSC0003DMT400032061	Potato	plasma membrane	29.32	30.37
PGSC0003DMT400050673	Potato	plasma membrane	29.02	30.35

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102595768	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1ALH7
PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400009843	PGSC:PGSC0003DMG400009843	EnsemblPlants:PGSC0003DMT400025493	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27008	PANTHER:PTHR27008:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296CBA8	RefSeq:XP_006368022.1	SEG:seg	:	:

Description

Receptor kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400009843]

Coordinates

chr00:+:37907474..37911133

Molecular Weight (calculated)

73652.6 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.143

Length

665 amino acids

Sequence
(BLAST)

001: MSPLMLLLCF LLQLIYSFYF CSSSSAAAAT STPSAPFNSL LPSDAVSLLS FKSKADLDNK LHYTLNERFD YCQWQGVKCV QGRVVRLVLQ GFSLRGTFPA
101: NSLTHLDQLR ILNLRNNSLS GPIPDLSGLP NLKTLFLDHN FFSGTFPFSV LSIHRLVILD LSRNNLTGSL PVRLTVLDRL NYLRLDSNWF NGSIPPLNQT
201: QLQIFNVSNN NLTGPVPVTP TLKKFNIRSF LRNPSLCGEV VDKPCRSAPF FDSPSSAASP PTPLYQNAQS QGILISPPPQ HKHKKVGVVL GFVVGTLILI
301: AAVLCLFAFV KKRREETETE SKATKCTIET ITNSAANATV SEPDDSSQEI KLEKEMKVLQ APKQQMKSGN LIFCSGETEL YSLEQLMRAS AELLGRGTIG
401: TTYKALMASQ LIVSVKRLDA GKTSITSAEA FEQHMESVGM LRHPNLVAVR AYFQAKQERL VIYDYQPNGS LFNLIHGSRS TRARPLHWTS CLKIAEDVAQ
501: GLAYIHQASK LTHGNLKSSN VLLGSDFEAC LTDYSIIALA DISLEDDPDS ACYKAPEVRK SARRATPGSD VYAYGILLLE LLTGKPPSQH PHLSPPDVPD
601: WVRAMREDDN EEDRWLAMLI DLASICSLTS PEQRPTMRQI LKMIQDIKDS AMVENNKRDA HNGYS

Best Arabidopsis Sequence Match ( AT5G67200.1 )
(BLAST)

001: MTLNFFLPFF FFFILLRVSA GAEPNYFNSL LPSDAVALLS FKSTADLDNK LLYSLTERYD YCQWRGVKCA QGRIVRLVLS GVGLRGYFSS ATLSRLDQLR
101: VLSLENNSLF GPIPDLSHLV NLKSLFLSRN QFSGAFPPSI LSLHRLMILS ISHNNFSGSI PSEINALDRL TSLNLDFNRF NGTLPSLNQS FLTSFNVSGN
201: NLTGVIPVTP TLSRFDASSF RSNPGLCGEI INRACASRSP FFGSTNKTTS SEAPLGQSAQ AQNGGAVVIP PVVTKKKGKE SGLVLGFTAG LASLIVLGLC
301: LVVFSLVIKK RNDDGIYEPN PKGEASLSQQ QQSQNQTPRT RAVPVLNSDT ESQKREKEVQ FQETEQRIPN SGNLVFCGES RSQGMYTMEQ LMRASAELLG
401: RGSVGITYKA VLDNQLIVTV KRLDAAKTAV TSEEAFENHM EIVGGLRHTN LVPIRSYFQS NGERLIIYDY HPNGSLFNLI HGSRSSRAKP LHWTSCLKIA
501: EDVAQGLYYI HQTSSALVHG NLKSTNILLG QDFEACLTDY CLSVLTDSSS ASPDDPDSSS YKAPEIRKSS RRPTSKCDVY SFGVLIFELL TGKNASRHPF
601: MAPHDMLDWV RAMREEEEGT EDNRLGMMTE TACLCRVTSP EQRPTMRQVI KMIQEIKESV MAEENDPFR

Arabidopsis Description

Probable inactive receptor kinase At5g67200 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y06]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.