Factsheet for PGSC0003DMT400068804

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
vacuole 3
plasma membrane 5
extracellular 2
golgi 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008650.2.1	Tomato	plasma membrane	77.71	94.6
VIT_01s0010g01660.t01	Wine grape	plasma membrane	57.02	70.9
KRH29251	Soybean	plasma membrane, vacuole	53.33	66.31
KRH24246	Soybean	plasma membrane	53.57	65.22
AT1G10850.1	Thale cress	plasma membrane	52.09	63.8
CDX97916	Canola	plasma membrane	51.85	63.79
CDY19325	Canola	plasma membrane	50.74	63.58
Bra019897.1-P	Field mustard	plasma membrane	51.72	63.44
AT1G60630.1	Thale cress	vacuole	49.01	61.04
Bra031492.1-P	Field mustard	plasma membrane	48.28	60.87
CDY24545	Canola	plasma membrane	48.15	60.71
CDY34130	Canola	cytosol, plastid	45.32	59.74
GSMUA_Achr3P14030_001	Banana	plasma membrane	44.7	57.89
GSMUA_Achr1P17850_001	Banana	plasma membrane	38.3	57.06
EES07820	Sorghum	plasma membrane	42.98	49.72
HORVU6Hr1G094680.2	Barley	plasma membrane	40.52	48.1
TraesCS6A01G417300.1	Wheat	plasma membrane	40.76	47.35
TraesCS6B01G472100.1	Wheat	plasma membrane	40.76	47.29
TraesCS6D01G402600.1	Wheat	plasma membrane	41.01	46.77
Zm00001d018541_P002	Maize	plasma membrane	42.24	43.31
PGSC0003DMT400020520	Potato	plasma membrane	34.85	42.18
PGSC0003DMT400036789	Potato	cytosol	16.26	41.12
PGSC0003DMT400025493	Potato	plasma membrane	33.5	40.9
PGSC0003DMT400013468	Potato	plasma membrane	30.42	38.9
PGSC0003DMT400078299	Potato	plasma membrane	29.19	37.68
PGSC0003DMT400037779	Potato	plasma membrane	31.03	37.44
PGSC0003DMT400039213	Potato	plasma membrane	30.05	37.03
PGSC0003DMT400046218	Potato	plasma membrane	28.94	36.04
PGSC0003DMT400008826	Potato	plasma membrane	26.72	35.93
PGSC0003DMT400070937	Potato	plasma membrane	25.62	35.14
PGSC0003DMT400006944	Potato	plasma membrane	28.94	34.76
PGSC0003DMT400050673	Potato	plasma membrane	26.85	34.28
PGSC0003DMT400040459	Potato	plasma membrane	27.09	34.0
PGSC0003DMT400074103	Potato	plasma membrane	26.97	33.8
PGSC0003DMT400023418	Potato	plasma membrane	25.74	33.44
PGSC0003DMT400032061	Potato	plasma membrane	24.51	31.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1CJI4
PFAM:PF07714	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400026760	PGSC:PGSC0003DMG400026760	EnsemblPlants:PGSC0003DMT400068804	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF40	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI000294C822	SEG:seg	:	:

Description

Receptor-kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400026760]

Coordinates

chr4:+:3753176..3757810

Molecular Weight (calculated)

90410.4 Da

IEP (calculated)

8.513

GRAVY (calculated)

-0.352

Length

812 amino acids

Sequence
(BLAST)

001: MEMSISMEIK NPVLFLRYCS SHKFLFFIFS IFSIVFPLVR SDDAEALLAL KSTIDPSNFL DWKKGTDFCQ WQGVKECMKG RVTKLVVENL NLSGLLDQNA
101: LNQLDQLRVL SLKENSISGQ IPNLAELSNL KSLFLNNNNF SGEFPATITL LHRIKVVVLA GNKLSGDIPP ALTNLSRLYV LYLEDNHFTG EIPPLNQLSL
201: RFFNVSKNQL SGEIPNTPAL SRFNESSFAG NVKLCGVQLH NNCPSTSPSY PIIPEDVSHH KKSKKLIIII VPVVAGILIL CVLMAIFIAC VRKRRRKTQD
301: GKSKGVEAGG GGGGGGEEEG TSRGGNGSGG GGGRDGNNGG KEGAFSWDQG SGGLGTLVFC GPGDQQMNYT LEDLLKASAE TLGRGIIGST YKAVMESGYI
401: VTVKRLRDSR FPRLEEFRRH VEIIGRLRHP NLVPLRAYFQ AKEERLLVYD YFPNGSLFSL VHGIVELMNS ERKLKRDRFG GVNLHLSGIR WNKIRVRETR
501: MQYTIDKNKK VQYHIKLLST DMLNSEIPTC TKSPMAESQS KRHTEVYFWN KDNVEGAMQQ QQHTRCNHTK WGKEVVTIDP RFEEKKFKAV RMEGTRANSG
601: SKPLHWTSCL KIAEDVATGL LHIHQNPGLT HGNLKSSNVL LGADFESCLT DYGLMPFRNL DSPEESGASS LFYRAPECRD IRRPLTHQAD VYSFGVLLLE
701: LLTGKTPFQD LVQEHGSDIP RWVKSVREEE TESGDEPVSS NEASEEKLGA LLNVAMACVS LVPENRPTMK DVLRMIRDAR AEAQGSSNSS DHSPGRWSDT
801: VQSLPRDEHL SI

Best Arabidopsis Sequence Match ( AT1G10850.1 )
(BLAST)

001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q940B9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.