Factsheet for Solyc04g008650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
plasma membrane 5
extracellular 2
golgi 2
endoplasmic reticulum 2
vacuole 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068804	Potato	plasma membrane	94.6	77.71
VIT_01s0010g01660.t01	Wine grape	plasma membrane	70.16	71.67
KRH29251	Soybean	plasma membrane, vacuole	64.17	65.54
KRH24246	Soybean	plasma membrane	64.77	64.77
AT1G10850.1	Thale cress	plasma membrane	63.87	64.25
CDX97916	Canola	plasma membrane	63.27	63.94
Bra019897.1-P	Field mustard	plasma membrane	63.12	63.6
CDY19325	Canola	plasma membrane	61.77	63.58
AT1G60630.1	Thale cress	vacuole	59.97	61.35
Bra031492.1-P	Field mustard	plasma membrane	58.62	60.71
CDY24545	Canola	plasma membrane	58.47	60.56
CDY34130	Canola	cytosol, plastid	55.17	59.74
GSMUA_Achr3P14030_001	Banana	plasma membrane	54.12	57.58
GSMUA_Achr1P17850_001	Banana	plasma membrane	46.78	57.25
EES07820	Sorghum	plasma membrane	51.87	49.29
HORVU6Hr1G094680.2	Barley	plasma membrane	49.03	47.81
TraesCS6A01G417300.1	Wheat	plasma membrane	49.48	47.21
TraesCS6B01G472100.1	Wheat	plasma membrane	49.48	47.14
TraesCS6D01G402600.1	Wheat	plasma membrane	49.63	46.49
Zm00001d018541_P002	Maize	plasma membrane	50.97	42.93
Solyc04g078590.2.1	Tomato	plasma membrane	42.28	42.22
Solyc02g093100.2.1	Tomato	plasma membrane	40.78	40.84
Solyc03g095490.2.1	Tomato	plastid	36.73	38.58
Solyc06g082610.2.1	Tomato	plasma membrane	35.53	37.92
Solyc05g009100.2.1	Tomato	plasma membrane	37.48	37.43
Solyc09g030450.2.1	Tomato	plasma membrane	35.38	37.28
Solyc03g111670.2.1	Tomato	extracellular	36.13	36.57
Solyc06g068910.2.1	Tomato	plasma membrane	33.43	35.17
Solyc06g048560.1.1	Tomato	plasma membrane	31.03	34.91
Solyc01g067020.2.1	Tomato	plasma membrane	31.48	34.71
Solyc09g008860.2.1	Tomato	plasma membrane	35.08	34.67
Solyc11g011020.1.1	Tomato	nucleus	33.28	34.58
Solyc03g118510.2.1	Tomato	nucleus	34.03	34.34
Solyc11g069960.1.1	Tomato	plasma membrane	31.48	33.07
Solyc08g081940.2.1	Tomato	plasma membrane	30.13	31.31

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	UniProt:K4BP21
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF00069	PFAM:PF08263	PFscan:PS50011
PANTHER:PTHR27008	PANTHER:PTHR27008:SF40	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-TM
EnsemblPlantsGene:Solyc04g008650.2	EnsemblPlants:Solyc04g008650.2.1	TMHMM:TMhelix	UniParc:UPI0002767158	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:2280193..2286296

Molecular Weight (calculated)

73397.8 Da

IEP (calculated)

8.071

GRAVY (calculated)

-0.292

Length

667 amino acids

Sequence
(BLAST)

001: MFRGKKKFKK PKPQLLKFFI LLYVFPLVRS DDAEALLALK STIDPSNFLD WKKGTDFCQW QGVKECMKGR VTKLVVENLN LSGLLDQDAL NQLDQLRVLS
101: FKANSISGQI PSLAGLSNLK SLFLNNNNFS GEFPATITLL HRIKVVVLTG NKLSGDIPPS LTNLSRLYVL YLEDNHFTGE IPPLNQLSLR FFNVSNNQLS
201: GEIPDTPALS RFNESSFTGN VKLCGVQLNN NCPSTSPSYP IIPENVSHHK KSKKLIIIIV PVVAGILILC VLMAIFIACV RKRRRNNQDG KSKGVEAGGG
301: EGGEEEGTSR GGNGGGGGGR DGNNGGKDGA FSWDQGSGGL GTLVFCGPGD QQMNYTLEDL LKASAETLGR GIIGSTYKAV MESGYIVTVK RLRDSRFPRL
401: EEFRRHVEII GRLRHPNLVP LRAYFQAKEE RLLVYDYFPN GSLFSLVHGT RANSGSKPLH WTSCLKIAED VATGLLHIHQ NPGLTHGNLK SSNVLLGADF
501: ESCLTDYGLM PFRNLDSPEE SGASSLFYRA PECRDIRRPL THQADVYSFG VLLLELLTGK TPFQDLVQEH GSDIPRWVRS VREEETESGD EPVSSNEASE
601: EKLGALLNVA MACVSLVPEN RPTMKDVLRM IRDARAEAQG SSNSSDHSPG RWSDTVQSLP RDEHLSI

Best Arabidopsis Sequence Match ( AT1G10850.1 )
(BLAST)

001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q940B9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.