Factsheet for Solyc03g111670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 9
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plastid: 20363867
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039213	Potato	plasma membrane	96.97	96.97
VIT_11s0016g04570.t01	Wine grape	plasma membrane	74.96	75.65
KRH56662	Soybean	plasma membrane	71.62	73.87
KRH03778	Soybean	endoplasmic reticulum	72.69	73.69
CDX77054	Canola	plasma membrane	68.44	73.1
AT2G26730.1	Thale cress	plasma membrane	71.02	71.12
CDY48185	Canola	plasma membrane	70.71	70.93
Bra034311.1-P	Field mustard	plasma membrane	70.56	70.78
Bra012045.1-P	Field mustard	plasma membrane	67.07	70.05
CDY04464	Canola	plasma membrane	66.77	69.62
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	51.9	64.41
GSMUA_Achr4P08980_001	Banana	plasma membrane	47.65	63.43
CDX71488	Canola	plasma membrane	67.22	60.6
GSMUA_Achr5P09830_001	Banana	plasma membrane	53.87	60.07
Os05t0588300-01	Rice	cytosol, mitochondrion	17.45	56.65
TraesCS3A01G217800.1	Wheat	plasma membrane, vacuole	43.7	55.07
TraesCS5A01G026300.1	Wheat	plasma membrane	54.02	53.06
Os01t0607900-01	Rice	plasma membrane	54.93	52.92
Solyc03g095490.2.1	Tomato	plastid	50.99	52.91
TraesCS5B01G025300.1	Wheat	plasma membrane	53.87	52.91
EES03251	Sorghum	plasma membrane	55.24	52.75
HORVU3Hr1G053300.1	Barley	plasma membrane	53.57	52.69
TraesCS3B01G248200.1	Wheat	golgi	53.87	52.51
TraesCS5D01G034200.1	Wheat	plasma membrane	53.72	52.44
Zm00001d011312_P001	Maize	mitochondrion, plasma membrane	54.48	52.33
HORVU5Hr1G007340.7	Barley	plasma membrane	53.41	52.3
TraesCS3D01G234500.1	Wheat	plasma membrane	53.57	52.22
Solyc09g030450.2.1	Tomato	plasma membrane	49.92	51.97
Zm00001d044434_P001	Maize	plasma membrane	54.48	51.51
Solyc06g082610.2.1	Tomato	plasma membrane	48.41	51.04
Solyc11g011020.1.1	Tomato	nucleus	48.1	49.38
Solyc06g048560.1.1	Tomato	plasma membrane	43.25	48.06
Solyc08g081940.2.1	Tomato	plasma membrane	46.28	47.51
Solyc06g068910.2.1	Tomato	plasma membrane	45.68	47.48
EES18787	Sorghum	plasma membrane	49.62	47.39
Zm00001d039188_P001	Maize	plasma membrane	46.89	47.25
Solyc03g118510.2.1	Tomato	nucleus	47.34	47.2
HORVU3Hr1G089490.3	Barley	plasma membrane	48.56	46.11
TraesCS3D01G391600.1	Wheat	plasma membrane	47.65	44.99
TraesCS3A01G397700.1	Wheat	plasma membrane	47.5	44.78
TraesCS3B01G429600.1	Wheat	plasma membrane	47.5	44.78
Solyc05g009100.2.1	Tomato	plasma membrane	44.76	44.16
Solyc01g067020.2.1	Tomato	plasma membrane	39.3	42.81
Solyc09g008860.2.1	Tomato	plasma membrane	42.34	41.33
Solyc11g069960.1.1	Tomato	plasma membrane	37.48	38.9
Solyc04g008650.2.1	Tomato	plasma membrane	36.57	36.13
Solyc04g078590.2.1	Tomato	plasma membrane	33.99	33.53
Solyc02g093100.2.1	Tomato	plasma membrane	32.47	32.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K4BK30	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011
PANTHER:PTHR27008	PANTHER:PTHR27008:SF24	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc03g111670.2	EnsemblPlants:Solyc03g111670.2.1	TMHMM:TMhelix	UniParc:UPI00027690E6	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:62312056..62315897

Molecular Weight (calculated)

71595.9 Da

IEP (calculated)

8.367

GRAVY (calculated)

-0.151

Length

659 amino acids

Sequence
(BLAST)

001: MAVFLRFVFC VLFFALLGLS RYRVFSEPTQ DKQALLAFLS QIRHANRVQW NSSASACTWF GVECDPNNTF VYSLRLPAVG LVGKIPSNSL GRLSQLRVLS
101: LHANRLSGSI PSDFSNLKLL RSLYLQKNEF SGEFPESIPG LTRLNRLDLS SNNFTGTIPF SINNLTHLTG LLLQNNSFTG TLPSINPSGL VDFSVSNNQL
201: NGSIPTALSK FPASSFAGNI DLCGGPLPPC TPFFPSPSPS PETEPKTPPS IKKSKKLSTA AIVGIAVGSA IGVLLLLLLL FFCLKRRKKD PSKTQKPPVA
301: SRPAGAVTGA AAEAGTSSSK DDITGGSGEG ERNKLVFFEG GGYSFDLEDL LRASAEVLGK GSVGTSYKAV LEEGTTVVVK RLKDVVVPRK DFEQQLEVMG
401: KMKHENVLPL RAFYYSKDEK LLVSDYMPAG SLSALLHGSR GSGRTPLDWD SRMRIVLGAA RGIAYLHISG KVVHGNIKAS NVLLKQDNQD ACVSDYGLNP
501: LFSTSAPVNH RVAGYRAPEV LETRKVTYKS DVYSFGVLML ELLTGKAPNQ ASLGEEGIDL PRWVQSVVRE EWTAEVFDVE LMRYHNVEEE MVQLLQIGMA
601: CVATMPDQRP AMTEVVRMIE EMNRGDTDDG LRQSSDDPSK GSEGQTPQES RGSPHGVTP

Best Arabidopsis Sequence Match ( AT2G26730.1 )
(BLAST)

001: MASISWVLNS LFSILLLTQR VNSESTAEKQ ALLTFLQQIP HENRLQWNES DSACNWVGVE CNSNQSSIHS LRLPGTGLVG QIPSGSLGRL TELRVLSLRS
101: NRLSGQIPSD FSNLTHLRSL YLQHNEFSGE FPTSFTQLNN LIRLDISSNN FTGSIPFSVN NLTHLTGLFL GNNGFSGNLP SISLGLVDFN VSNNNLNGSI
201: PSSLSRFSAE SFTGNVDLCG GPLKPCKSFF VSPSPSPSLI NPSNRLSSKK SKLSKAAIVA IIVASALVAL LLLALLLFLC LRKRRGSNEA RTKQPKPAGV
301: ATRNVDLPPG ASSSKEEVTG TSSGMGGETE RNKLVFTEGG VYSFDLEDLL RASAEVLGKG SVGTSYKAVL EEGTTVVVKR LKDVMASKKE FETQMEVVGK
401: IKHPNVIPLR AYYYSKDEKL LVFDFMPTGS LSALLHGSRG SGRTPLDWDN RMRIAITAAR GLAHLHVSAK LVHGNIKASN ILLHPNQDTC VSDYGLNQLF
501: SNSSPPNRLA GYHAPEVLET RKVTFKSDVY SFGVLLLELL TGKSPNQASL GEEGIDLPRW VLSVVREEWT AEVFDVELMR YHNIEEEMVQ LLQIAMACVS
601: TVPDQRPVMQ EVLRMIEDVN RSETTDDGLR QSSDDPSKGS EGQTPPGESR TPPRSVTP

Arabidopsis Description

Probable inactive receptor kinase At2g26730 [Source:UniProtKB/Swiss-Prot;Acc:O48788]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.