Factsheet for TraesCS3A01G217800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G234500.1	Wheat	plasma membrane	98.28	76.04
TraesCS3B01G248200.1	Wheat	golgi	97.71	75.59
HORVU3Hr1G053300.1	Barley	plasma membrane	95.79	74.78
TraesCS5A01G026300.1	Wheat	plasma membrane	84.7	66.02
Os01t0607900-01	Rice	plasma membrane	84.32	64.47
EES03251	Sorghum	plasma membrane	83.75	63.48
Zm00001d011312_P001	Maize	mitochondrion, plasma membrane	80.31	61.22
Zm00001d044434_P001	Maize	plasma membrane	80.5	60.4
KRH63039	Soybean	cytosol	29.64	58.71
GSMUA_Achr4P08980_001	Banana	plasma membrane	51.24	54.14
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	52.01	51.22
GSMUA_Achr5P09830_001	Banana	plasma membrane	53.92	47.72
VIT_11s0016g04570.t01	Wine grape	plasma membrane	59.27	47.47
CDY04464	Canola	plasma membrane	56.98	47.15
Bra012045.1-P	Field mustard	plasma membrane	56.79	47.07
CDX77054	Canola	plasma membrane	55.45	47.0
KRH03778	Soybean	endoplasmic reticulum	58.32	46.92
KRH56662	Soybean	plasma membrane	56.79	46.48
TraesCS3A01G397700.1	Wheat	plasma membrane	61.95	46.35
KRH54823	Soybean	nucleus	57.36	45.94
CDY48185	Canola	plasma membrane	57.36	45.66
Bra034311.1-P	Field mustard	plasma membrane	56.98	45.36
AT2G26730.1	Thale cress	plasma membrane	55.45	44.07
Solyc03g111670.2.1	Tomato	extracellular	55.07	43.7
PGSC0003DMT400039213	Potato	plasma membrane	54.88	43.55
CDX71488	Canola	plasma membrane	56.21	40.22
TraesCS4A01G133400.1	Wheat	plasma membrane	47.42	38.93
TraesCS3A01G342300.1	Wheat	plasma membrane	47.04	38.8
TraesCS2A01G104100.1	Wheat	plasma membrane	46.65	38.24
TraesCS3A01G148400.1	Wheat	plasma membrane	45.32	37.38
TraesCS1A01G301800.2	Wheat	plasma membrane, vacuole	45.7	37.34
TraesCS4A01G267300.1	Wheat	plasma membrane	47.23	36.7
TraesCS4A01G064200.1	Wheat	plasma membrane	47.8	36.66
TraesCS3A01G037200.1	Wheat	plasma membrane	44.93	34.97
TraesCS2A01G337000.1	Wheat	plasma membrane	44.36	34.68
TraesCS5A01G205500.1	Wheat	plasma membrane	41.68	33.49
TraesCS3A01G250300.1	Wheat	plasma membrane	40.15	32.61
TraesCS7A01G214300.1	Wheat	plasma membrane	39.2	31.98
TraesCS5A01G130900.1	Wheat	plasma membrane	43.59	30.6
TraesCS6A01G417300.1	Wheat	plasma membrane	38.43	28.76
TraesCS2A01G512500.1	Wheat	plasma membrane	35.76	26.49

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011
PFscan:PS51257	PANTHER:PTHR27008	PANTHER:PTHR27008:SF24	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G217800	EnsemblPlants:TraesCS3A01G217800.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:-:398880878..398886055

Molecular Weight (calculated)

55795.1 Da

IEP (calculated)

7.128

GRAVY (calculated)

0.027

Length

523 amino acids

Sequence
(BLAST)

001: MAVAVSRAVL LAAVASLACL AFAEPPPSER SALLAFLTAT PHERRLGWNT STPACSWVGV TCDAAQSTVV QLRLPGVGLV GAIPPATISR LPNLQVLSLR
101: SNRIIGGIPD DLLQLSSLRA IFLQNNMISG AIPSGVGKLA ALERLVLSHN NLSGPIPFAL NSLASLRSLR LEGNRLSGKI PSITNPELKD FNVSVNSLNG
201: SIPQALARFP ADSFAGNLQL CGKPLPACSP FFPSYKAVLE EGTTVVVKRL KDVAVARREF DAHMEALGRV EHRNLLPVRA YYFSKDEKLL VYDYLPNGSL
301: SAMLHGSRGS GRTPMDWDAR MLSALSASRG LAHLHSAHNL AHGNVKSSNV LLRPDYDAAA LSDFCLHPIF APSSTRAGAG GYRAPEVVDT RRPTFKADVY
401: SLGVLLLELL TGKSPTHASL EGDGTLDLPR WVQSVVREEW TAEVFDVELV RLGASAEEEM VALLQVAMAC VATVPDARPD APDVVRMIEE IGGGHGQTTT
501: EESARGTPEE ERSRGTPPAA PTP

Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)

001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.