CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 26746009

msms PMID: 26746009 doi

S Chen, Y Luo, G Ding, F Xu

National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04464	Canola	plasma membrane	83.45	96.52
CDX77054	Canola	plasma membrane	74.28	88.01
CDY48185	Canola	plasma membrane	76.88	85.54
AT2G26730.1	Thale cress	plasma membrane	74.28	82.52
VIT_11s0016g04570.t01	Wine grape	plasma membrane	63.75	71.36
KRH56662	Soybean	plasma membrane	59.23	67.76
KRH03778	Soybean	endoplasmic reticulum	59.78	67.23
Solyc03g111670.2.1	Tomato	extracellular	60.6	67.22
PGSC0003DMT400039213	Potato	plasma membrane	59.78	66.31
GSMUA_Achr4P08980_001	Banana	plasma membrane	42.82	63.23
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	44.19	60.83
Os05t0588300-01	Rice	cytosol, mitochondrion	16.14	58.13
GSMUA_Achr5P09830_001	Banana	plasma membrane	46.92	58.04
CDY03526	Canola	cytosol	20.11	57.42
CDY10964	Canola	cytosol	11.22	56.55
TraesCS3A01G217800.1	Wheat	plasma membrane, vacuole	40.22	56.21
Os01t0607900-01	Rice	plasma membrane	49.52	52.92
TraesCS5A01G026300.1	Wheat	plasma membrane	48.29	52.61
TraesCS3B01G248200.1	Wheat	golgi	48.43	52.37
TraesCS3D01G234500.1	Wheat	plasma membrane	48.43	52.37
Zm00001d011312_P001	Maize	mitochondrion, plasma membrane	49.11	52.33
EES03251	Sorghum	plasma membrane	49.38	52.32
TraesCS5D01G034200.1	Wheat	plasma membrane	48.29	52.3
CDY02808	Canola	plastid	30.1	52.26
TraesCS5B01G025300.1	Wheat	plasma membrane	47.88	52.16
Zm00001d044434_P001	Maize	plasma membrane	49.66	52.08
HORVU3Hr1G053300.1	Barley	plasma membrane	47.47	51.79
CDX88667	Canola	plasma membrane	44.05	51.52
HORVU5Hr1G007340.7	Barley	plasma membrane	47.2	51.26
CDY58565	Canola	plasma membrane	44.73	50.08
CDY32713	Canola	plasma membrane	43.91	49.31
CDY27986	Canola	plasma membrane	41.31	47.86
CDY35996	Canola	plasma membrane	41.31	47.56
Zm00001d039188_P001	Maize	plasma membrane	42.54	47.55
EES18787	Sorghum	plasma membrane	44.19	46.81
CDX70172	Canola	plasma membrane	39.53	46.31
CDX98821	Canola	plasma membrane	39.67	46.18
HORVU3Hr1G089490.3	Barley	plasma membrane	43.5	45.82
CDX95816	Canola	plasma membrane	36.53	45.25
CDY67567	Canola	plasma membrane	35.57	44.6
CDY28719	Canola	plasma membrane	36.8	44.54
CDY51524	Canola	plasma membrane	37.76	44.52
CDX69441	Canola	plasma membrane	37.62	44.5
CDX94213	Canola	plasma membrane	37.35	44.39
CDY49655	Canola	plasma membrane	37.35	44.25
CDX92167	Canola	plasma membrane	37.76	44.23
CDY61284	Canola	plasma membrane	38.17	44.15
TraesCS3D01G391600.1	Wheat	plasma membrane	42.13	44.13
CDY38103	Canola	plasma membrane	36.66	43.72
TraesCS3B01G429600.1	Wheat	plasma membrane	41.72	43.63
CDX85498	Canola	plasma membrane	36.39	43.39
TraesCS3A01G397700.1	Wheat	plasma membrane	41.45	43.35
CDY41827	Canola	plasma membrane	37.62	42.5
CDY47625	Canola	plasma membrane	38.3	42.3
CDY44903	Canola	plasma membrane	34.88	42.29
CDX77309	Canola	plasma membrane	37.21	42.11
CDX81508	Canola	plasma membrane	37.07	41.89
CDY34407	Canola	mitochondrion	19.29	41.47
CDY35028	Canola	mitochondrion	13.13	40.68
CDX84553	Canola	plasma membrane	36.53	40.64
CDY38186	Canola	plasma membrane	32.42	40.1
CDY25569	Canola	mitochondrion	18.47	39.94
CDX79688	Canola	plasma membrane	35.02	39.75
CDY54343	Canola	plasma membrane	32.28	39.53
CDY47068	Canola	plasma membrane	32.28	39.46
CDY08366	Canola	plasma membrane	31.74	39.39
CDY22372	Canola	cytosol	15.6	38.64
CDX87143	Canola	plasma membrane	32.69	38.49
CDY19849	Canola	plasma membrane	32.56	38.33
CDX71536	Canola	cytosol	15.46	38.31
CDX67503	Canola	cytosol, mitochondrion	18.74	35.68
CDY34130	Canola	cytosol, plastid	29.55	35.06
CDX97916	Canola	plasma membrane	31.33	34.7
CDY24545	Canola	plasma membrane	30.51	34.63
CDX81336	Canola	plasma membrane	29.14	34.19
CDY19325	Canola	plasma membrane	30.23	34.1
CDX83117	Canola	plasma membrane	29.55	32.98
CDY01430	Canola	plasma membrane	30.78	32.89
CDX68581	Canola	plasma membrane	28.86	32.31
CDX71537	Canola	extracellular	12.18	31.23

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:A0A078C8Z5	EnsemblPlants:CDX71488
ProteinID:CDX71488	ProteinID:CDX71488.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00148371001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR27008
PANTHER:PTHR27008:SF24	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix
UniParc:UPI0004EDEC7A	SEG:seg	:	:	:	:

Description

BnaC04g17230D

Coordinates

chrLK031793:-:1429721..1432620

Molecular Weight (calculated)

80074.4 Da

IEP (calculated)

9.576

GRAVY (calculated)

-0.146

Length

731 amino acids

Sequence
(BLAST)

001: MPENRFWFSA NPNYLRNPLL VKQTKEETRK IRLLSYFSYY YFLFFLKNPP MGGISLVLSC FVSILLLTER VSSESLEEKQ ALLAFLQRIP HENRLQWNDS
101: DSACNWVGVE CNSDRSSVYS LRLPGTGLVG QIPSGTLGKL SQLRVLSLRS NRLSGQIPPD FKNLTHLRSL YLQHNELSGE FPASITQLTG LVRLDISSNN
201: LTGSIPFAVN NLTLLTGLFL GNNRFSGNLP SITVGLTDFN VSVNNLNGSI PSSLSKFPAA SFAGNVNLCG GPLRPCKSFF ISPSPSPDAD SPPSRFSGGK
301: KSKLSTAAII AISVASALIG LLLLALVFFL CLTRRKRRGG GGSRTKQTKP AETTTRNVPE AIPPAGGASS SKDDLLRASA EVLGKGSVGT SYKAVLEEGT
401: TVVVKRLKDV AASKKEFESQ MEVVGKTKHP NVVPLRAYYY SKDEKLLVFD FMPSGSLSAL LHGYKKFHIL FVSVAYSCSC SAIIIKRKKR KLPTLHASVC
501: CLNSPVLCTG SRGSGRTPLD WDNRMRIAIT AARGLAHLHV SAKLVHGNIK ASNILLQPNQ DTCVSDYGLN QLFSNTTPPN RLAGYHAPEV LETRKVTFKS
601: DVYSFGVLLL ELLTGKSPNQ ASLGEEGIDL PRWVLSVVRE EWTAEVFDVE LMRYHNIEEE MVQLLQIAMA CVSTVPDQRP VMQEVLRMIE DVNRSETTDD
701: GLRQSSDDPS KGSEGQTPPG ESRTPPRSVT P

Best Arabidopsis Sequence Match ( AT2G26730.1 )
(BLAST)

001: MASISWVLNS LFSILLLTQR VNSESTAEKQ ALLTFLQQIP HENRLQWNES DSACNWVGVE CNSNQSSIHS LRLPGTGLVG QIPSGSLGRL TELRVLSLRS
101: NRLSGQIPSD FSNLTHLRSL YLQHNEFSGE FPTSFTQLNN LIRLDISSNN FTGSIPFSVN NLTHLTGLFL GNNGFSGNLP SISLGLVDFN VSNNNLNGSI
201: PSSLSRFSAE SFTGNVDLCG GPLKPCKSFF VSPSPSPSLI NPSNRLSSKK SKLSKAAIVA IIVASALVAL LLLALLLFLC LRKRRGSNEA RTKQPKPAGV
301: ATRNVDLPPG ASSSKEEVTG TSSGMGGETE RNKLVFTEGG VYSFDLEDLL RASAEVLGKG SVGTSYKAVL EEGTTVVVKR LKDVMASKKE FETQMEVVGK
401: IKHPNVIPLR AYYYSKDEKL LVFDFMPTGS LSALLHGSRG SGRTPLDWDN RMRIAITAAR GLAHLHVSAK LVHGNIKASN ILLHPNQDTC VSDYGLNQLF
501: SNSSPPNRLA GYHAPEVLET RKVTFKSDVY SFGVLLLELL TGKSPNQASL GEEGIDLPRW VLSVVREEWT AEVFDVELMR YHNIEEEMVQ LLQIAMACVS
601: TVPDQRPVMQ EVLRMIEDVN RSETTDDGLR QSSDDPSKGS EGQTPPGESR TPPRSVTP

Arabidopsis Description

Probable inactive receptor kinase At2g26730 [Source:UniProtKB/Swiss-Prot;Acc:O48788]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.