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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84553 Canola plasma membrane 97.2 95.28
AT2G36570.1 Thale cress plasma membrane 89.6 85.86
VIT_08s0007g04150.t01 Wine grape plasma membrane 68.79 64.86
PGSC0003DMT400006944 Potato plasma membrane 67.08 63.91
Solyc09g008860.2.1 Tomato plasma membrane 66.77 63.7
KRH67820 Soybean plasma membrane 66.46 63.5
KRH20013 Soybean plasma membrane 66.3 62.06
KRG96115 Soybean plasma membrane 65.99 58.78
KRH32636 Soybean plasma membrane 65.99 57.82
HORVU5Hr1G063050.3 Barley plasma membrane 34.94 48.08
CDY03526 Canola cytosol 18.94 47.66
TraesCS5D01G138400.1 Wheat plasma membrane 54.5 47.11
TraesCS5B01G130800.1 Wheat plasma membrane 54.19 46.85
TraesCS5A01G130900.1 Wheat plasma membrane 54.19 46.85
Os12t0145900-01 Rice golgi, plasma membrane 55.59 45.15
CDX81508 Canola plasma membrane 44.72 44.51
Zm00001d004929_P001 Maize mitochondrion 52.95 44.46
CDY44903 Canola plasma membrane 41.46 44.28
HORVU5Hr1G041210.4 Barley plasma membrane 53.42 44.22
OQU82868 Sorghum plasma membrane 52.48 43.9
CDX77054 Canola plasma membrane 41.46 43.27
CDY10964 Canola cytosol 9.63 42.76
CDY02808 Canola plastid 27.8 42.52
CDX95816 Canola plasma membrane 38.35 41.86
CDX92167 Canola plasma membrane 39.75 41.03
CDY04464 Canola plasma membrane 40.22 40.98
CDY35996 Canola plasma membrane 40.37 40.94
CDY27986 Canola plasma membrane 40.06 40.89
CDY67567 Canola plasma membrane 36.8 40.65
CDY48185 Canola plasma membrane 41.3 40.49
CDY34407 Canola mitochondrion 21.27 40.29
CDY25569 Canola mitochondrion 21.12 40.24
CDX88667 Canola plasma membrane 38.98 40.16
CDY61284 Canola plasma membrane 38.98 39.72
CDX77309 Canola plasma membrane 39.29 39.16
CDY22372 Canola cytosol 17.86 38.98
CDX98821 Canola plasma membrane 37.89 38.85
CDX94213 Canola plasma membrane 36.96 38.7
CDX71536 Canola cytosol 17.7 38.64
CDY41827 Canola plasma membrane 38.82 38.64
CDX70172 Canola plasma membrane 37.42 38.62
CDY58565 Canola plasma membrane 38.98 38.44
CDY28719 Canola plasma membrane 35.56 37.91
CDY32713 Canola plasma membrane 38.2 37.79
CDY35028 Canola mitochondrion 13.82 37.71
CDY51524 Canola plasma membrane 36.18 37.58
CDX69441 Canola plasma membrane 35.71 37.22
CDY49655 Canola plasma membrane 35.56 37.12
CDY38186 Canola plasma membrane 33.7 36.72
CDY38103 Canola plasma membrane 34.94 36.7
CDX85498 Canola plasma membrane 34.94 36.7
CDY08366 Canola plasma membrane 33.39 36.5
CDY54343 Canola plasma membrane 33.7 36.35
CDY47625 Canola plasma membrane 36.65 35.65
CDX87143 Canola plasma membrane 34.32 35.59
CDY47068 Canola plasma membrane 32.92 35.45
CDY19849 Canola plasma membrane 34.01 35.27
CDY34130 Canola cytosol, plastid 33.7 35.23
CDY24545 Canola plasma membrane 35.09 35.09
CDY19325 Canola plasma membrane 35.25 35.03
CDX71488 Canola plasma membrane 39.75 35.02
CDX97916 Canola plasma membrane 35.87 35.0
CDX67503 Canola cytosol, mitochondrion 20.19 33.85
CDX81336 Canola plasma membrane 30.12 31.14
CDX83117 Canola plasma membrane 30.43 29.92
CDY01430 Canola plasma membrane 31.52 29.68
CDX68581 Canola plasma membrane 29.97 29.56
CDX71537 Canola extracellular 11.49 25.96
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078CX24EnsemblPlants:CDX79688
ProteinID:CDX79688ProteinID:CDX79688.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00132488001InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069PFAM:PF08263
PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF33InterPro:Prot_kinase_domSUPFAM:SSF52058SUPFAM:SSF56112
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EED015SEG:seg::
Description
BnaC03g20240D
Coordinates
chrLK031818:+:1588644..1590903
Molecular Weight (calculated)
70220.1 Da
IEP (calculated)
6.359
GRAVY (calculated)
-0.181
Length
644 amino acids
Sequence
(BLAST)
001: MAKPLPLLLL LLLHLSVSSA LNDTNALTLF RIQTDTHGNL AANWTGSDAC SSSWRGVYCS PYSRRVTGLS LPSLSLRGPL TSLSSLDQLR LLDLHDNRLN
101: GTVSPLTNCT NLGLVYLAGN DISGEIPKEI SSLKRMIRLD LSDNNIRGVI PREILGLTRI LTIRLQDNEL TGRIPDFSQV SSLLELNVSY NELHGKVTDG
201: VVKKFGELSF SGNEGLCGSD PLPDCSYTND PESSDTDKIV PSNPTSLPHS PVVAGDRTIH HHRGLRAGAI AAVIGGGVAV IVLASFGFAF CCGRSDRGGG
301: SKSAILESGF AGGEGKRRSS YGGGGGEESD ATSATDRSRL VFFERRKQFE LEDLLKASAE MLGKGSLGTV YKAVLDDGTT TVAVKRLKDA NPCPRKEFEQ
401: YMEIIGRLKH QNVVKLRAYY YAKEEKLLVY EYLPNGSLHS LLHGNRGPGR IPLDWTTRIS LMLGAARGLA KIHDEYSISK IPHGNIKSSN VLLDRNGVAL
501: IADFGLSLLL NPQSEIKRLS QKADVYSFGV LLLEVLTGKA PSEEEEAVVD LPKWVRSVVK EEWTAEVFDP ELLRYKNIEE EMVAMLHIGL ACVVPQPEKR
601: PTMAEVVKMV EEIRVEQSPV GEDFDESRNS MSPSLATTED LGHV
Best Arabidopsis Sequence Match ( AT2G36570.1 )
(BLAST)
001: MAAKPLLLPL LLLLHLSITL AQNDTNALTL FRLQTDTHGN LAGNWTGSDA CTSSWQGVSC SPSSHRVTEL SLPSLSLRGP LTSLSSLDQL RLLDLHDNRL
101: NGTVSPLTNC KNLRLVYLAG NDLSGEIPKE ISFLKRMIRL DLSDNNIRGV IPREILGFTR VLTIRIQNNE LTGRIPDFSQ MKSLLELNVS FNELHGNVSD
201: GVVKKFGDLS FSGNEGLCGS DPLPVCTITN DPESSNTDQI VPSNPTSIPH SPVSVREPEI HSHRGIKPGI IAAVIGGCVA VIVLVSFGFA FCCGRLDRNG
301: ERSKSGSVET GFVGGGEGKR RSSYGEGGES DATSATDRSR LVFFERRKQF ELDDLLKASA EMLGKGSLGT VYKAVLDDGS TTVAVKRLKD ANPCPRKEFE
401: QYMEIIGRLK HQNVVKLRAY YYAKEEKLLV YEYLPNGSLH SLLHGNRGPG RIPLDWTTRI SLMLGAARGL AKIHDEYSIS KIPHGNIKSS NVLLDRNGVA
501: LIADFGLSLL LNPVHAIARL GGYRAPEQSE IKRLSQKADV YSFGVLLLEV LTGKAPSIFP SPSRPRSAAS VAVEEEEEAV VDLPKWVRSV VKEEWTAEVF
601: DPELLRYKNI EEEMVAMLHI GLACVVPQPE KRPTMAEVVK MVEEIRVEQS PVGEDFDESR NSMSPSLATT DG
Arabidopsis Description
PXC1Leucine-rich repeat receptor-like protein kinase PXC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.