CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G41680.1	Thale cress	mitochondrion	79.24	52.09
CDX67503	Canola	cytosol, mitochondrion	81.36	50.0
CDY10964	Canola	cytosol	27.12	44.14
CDY34407	Canola	mitochondrion	61.02	42.35
CDY25569	Canola	mitochondrion	60.17	42.01
CDY03526	Canola	cytosol	43.64	40.23
CDY08366	Canola	plasma membrane	61.86	24.79
CDY38186	Canola	plasma membrane	61.02	24.37
CDY02808	Canola	plastid	43.22	24.23
GSMUA_Achr7P14210_001	Banana	plasma membrane	47.46	19.86
CDY22372	Canola	cytosol	23.73	18.98
CDX71536	Canola	cytosol	23.31	18.64
CDX94213	Canola	plasma membrane	48.31	18.54
CDY47625	Canola	plasma membrane	48.73	17.37
TraesCS3A01G148400.1	Wheat	plasma membrane	46.61	17.35
TraesCS3D01G156100.1	Wheat	plasma membrane	46.61	17.3
TraesCS3B01G175300.1	Wheat	plasma membrane	46.61	17.3
CDY54343	Canola	plasma membrane	43.22	17.09
GSMUA_Achr8P19840_001	Banana	plasma membrane	34.32	16.95
CDY47068	Canola	plasma membrane	42.37	16.72
CDY67567	Canola	plasma membrane	40.25	16.3
CDX95816	Canola	plasma membrane	40.25	16.1
CDY27986	Canola	plasma membrane	42.8	16.01
CDX88667	Canola	plasma membrane	42.37	16.0
CDY35996	Canola	plasma membrane	42.8	15.91
KXG31530	Sorghum	plasma membrane	44.92	15.89
GSMUA_Achr10P...	Banana	plasma membrane	35.59	15.85
CDY58565	Canola	plasma membrane	43.64	15.77
CDY48185	Canola	plasma membrane	43.64	15.68
CDX77054	Canola	plasma membrane	40.68	15.56
HORVU3Hr1G030090.5	Barley	cytosol	46.61	15.56
CDY32713	Canola	plasma membrane	42.8	15.51
CDY04464	Canola	plasma membrane	41.53	15.51
Zm00001d039325_P001	Maize	plasma membrane	42.37	15.22
Zm00001d008965_P001	Maize	plasma membrane	43.22	15.18
CDY61284	Canola	plasma membrane	40.25	15.03
CDY44903	Canola	plasma membrane	38.14	14.93
CDX92167	Canola	plasma membrane	39.41	14.9
CDX70172	Canola	plasma membrane	38.56	14.58
CDX98821	Canola	plasma membrane	38.56	14.49
CDX84553	Canola	plasma membrane	39.83	14.31
CDX77309	Canola	plasma membrane	38.56	14.09
CDX81508	Canola	plasma membrane	38.14	13.91
CDY41827	Canola	plasma membrane	38.14	13.91
CDX87143	Canola	plasma membrane	36.44	13.85
CDX79688	Canola	plasma membrane	37.71	13.82
CDY19849	Canola	plasma membrane	35.59	13.53
GSMUA_Achr5P06820_001	Banana	plasma membrane	32.63	13.28
CDX71488	Canola	plasma membrane	40.68	13.13
CDY51524	Canola	plasma membrane	32.63	12.42
CDY49655	Canola	plasma membrane	32.2	12.32
CDX69441	Canola	plasma membrane	32.2	12.3
CDY28719	Canola	plasma membrane	31.36	12.25
CDY38103	Canola	plasma membrane	31.78	12.23
CDY34130	Canola	cytosol, plastid	31.78	12.18
CDX85498	Canola	plasma membrane	31.36	12.07
CDY24545	Canola	plasma membrane	31.78	11.65
CDX97916	Canola	plasma membrane	29.66	10.61
CDY19325	Canola	plasma membrane	28.81	10.49
CDX81336	Canola	plasma membrane	26.69	10.11
CDX83117	Canola	plasma membrane	26.27	9.47
CDY01430	Canola	plasma membrane	27.12	9.36
CDX68581	Canola	plasma membrane	25.0	9.04
CDX71537	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:A0A078HE01	UniProt:A0A078HE01	EnsemblPlants:CDY35028	ProteinID:CDY35028
ProteinID:CDY35028.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00057872001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF15	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
UniParc:UPI0004EF2596	SEG:seg	:	:	:	:

Description

BnaC06g13580DBnaC06g13580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE01]

Coordinates

chrLK032345:-:113437..114501

Molecular Weight (calculated)

26156.5 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.216

Length

236 amino acids

Sequence
(BLAST)

001: MMAWCLRKKR YVKAKLSWKS KKKNLSPSGN WQPEDDSDEG KIVFFGGSEN GVSLDWESRL RIAIGAARGL AIIHEADDRK LVHGNIKSST IFIDSQCNGC
101: ICDLGLTAIT RSLPQASICS SGYHAPEVTD RRKCTQFSDV YSFGVVLLEL LTGKSPASPL PGEGNMDLAS WIRSVVSKEW TGEVFDIELM KQIGIEEEMV
201: EMLQIGLACV ALNPQDRPHA AEVVKMLRDI RTLDPE

Best Arabidopsis Sequence Match ( AT1G64210.1 )
(BLAST)

001: MQIFLFFFSL ILCFVLISSQ TLEDDKKALL HFLSSFNSSR LHWNQSSDVC HSWTGVTCNE NGDRIVSVRL PAVGFNGLIP PFTISRLSSL KFLSLRKNHF
101: TGDFPSDFTN LKSLTHLYLQ HNHLSGPLLA IFSELKNLKV LDLSNNGFNG SIPTSLSGLT SLQVLNLANN SFSGEIPNLH LPKLSQINLS NNKLIGTIPK
201: SLQRFQSSAF SGNNLTERKK QRKTPFGLSQ LAFLLILSAA CVLCVSGLSF IMITCFGKTR ISGKLRKRDS SSPPGNWTSR DDNTEEGGKI IFFGGRNHLF
301: DLDDLLSSSA EVLGKGAFGT TYKVTMEDMS TVVVKRLKEV VVGRREFEQQ MEIIGMIRHE NVAELKAYYY SKDDKLAVYS YYNHGSLFEI LHGNRGRYHR
401: VPLDWDARLR IATGAARGLA KIHEGKFIHG NIKSSNIFLD SQCYGCIGDV GLTTIMRSLP QTTCLTSGYH APEITDTRRS TQFSDVYSFG VVLLELLTGK
501: SPVSQAELVP TGGENMDLAS WIRSVVAKEW TGEVFDMEIL SQSGGFEEEM VEMLQIGLAC VALKQQERPH IAQVLKLIED IRSVDAE

Arabidopsis Description

Putative inactive receptor-like protein kinase At1g64210 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH71]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.