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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73678
CDX92401
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02880.1 CDX73678 AT3G51920.1 17360592
AT3G02880.1 CDX95314 AT3G51920.1 17360592
AT3G02880.1 CDY23174 AT3G51920.1 17360592
AT3G02880.1 CDX92401 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040609.1-P Field mustard plasma membrane 99.68 99.2
CDY28719 Canola plasma membrane 95.32 97.85
AT3G02880.1 Thale cress plasma membrane 84.84 83.89
CDX85498 Canola plasma membrane 76.77 77.65
CDY38103 Canola plasma membrane 76.13 77.0
CDY49655 Canola plasma membrane 76.13 76.5
CDX69441 Canola plasma membrane 75.97 76.21
VIT_14s0006g01080.t01 Wine grape plasma membrane 55.32 53.68
KRH17350 Soybean extracellular 52.9 52.56
GSMUA_Achr8P23000_001 Banana plasma membrane 46.29 51.99
GSMUA_Achr3P07440_001 Banana plasma membrane 43.39 51.93
KRH72980 Soybean extracellular 51.13 51.8
Solyc11g011020.1.1 Tomato nucleus 53.55 51.71
PGSC0003DMT400040459 Potato plasma membrane 53.06 50.85
Os03t0712400-02 Rice plasma membrane 18.23 50.22
CDY61284 Canola plasma membrane 51.13 50.16
GSMUA_Achr9P15690_001 Banana plasma membrane 45.16 50.0
GSMUA_Achr2P21610_001 Banana plasma membrane 48.71 49.92
CDX95816 Canola plasma membrane 47.42 49.83
GSMUA_Achr10P... Banana plasma membrane 46.29 49.83
CDY67567 Canola plasma membrane 46.77 49.74
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 44.68 49.2
CDY41827 Canola plasma membrane 50.48 48.38
GSMUA_Achr3P02160_001 Banana plasma membrane 37.26 48.02
CDX77309 Canola plasma membrane 50.0 47.99
CDX92167 Canola plasma membrane 48.23 47.92
GSMUA_Achr7P11160_001 Banana plasma membrane 40.81 47.38
Zm00001d048053_P001 Maize plasma membrane 49.84 46.19
Os03t0223000-02 Rice plasma membrane 49.84 45.78
EER95247 Sorghum plasma membrane 49.52 45.55
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 49.35 45.54
HORVU4Hr1G007550.1 Barley plasma membrane 49.03 45.51
TraesCS4D01G241100.1 Wheat plasma membrane 48.87 45.02
TraesCS4D01G046900.1 Wheat plasma membrane 48.71 45.01
CDY03526 Canola cytosol 18.55 44.92
TraesCS4B01G047100.1 Wheat plasma membrane 48.87 44.89
TraesCS4A01G064200.1 Wheat plasma membrane 48.87 44.43
TraesCS4B01G241500.1 Wheat plasma membrane 45.0 44.29
TraesCS4A01G267300.1 Wheat plasma membrane 48.06 44.28
EER90996 Sorghum plasma membrane 49.68 44.25
Zm00001d033745_P001 Maize plasma membrane 49.03 43.8
CDX77054 Canola plasma membrane 43.55 43.76
TraesCS5D01G210800.1 Wheat plasma membrane 45.48 43.52
CDY04464 Canola plasma membrane 44.19 43.35
TraesCS5B01G202900.1 Wheat plasma membrane 45.0 42.73
CDY48185 Canola plasma membrane 45.0 42.47
CDX88667 Canola plasma membrane 42.58 42.24
CDY27986 Canola plasma membrane 42.9 42.16
Os09t0400500-01 Rice plasma membrane 44.03 42.13
TraesCS5A01G205500.1 Wheat plasma membrane 44.19 42.09
CDY35996 Canola plasma membrane 43.06 42.05
Os04t0463000-01 Rice plasma membrane 45.0 41.7
TraesCS2B01G344900.1 Wheat plasma membrane 44.68 41.53
TraesCS2D01G325900.1 Wheat plasma membrane 44.68 41.41
CDY10964 Canola cytosol 9.68 41.38
TraesCS2A01G337000.1 Wheat plasma membrane 44.35 41.11
Zm00001d013430_P001 Maize mitochondrion 47.9 41.02
CDY58565 Canola plasma membrane 43.06 40.89
HORVU0Hr1G012920.2 Barley cytosol 33.55 40.78
HORVU4Hr1G066900.1 Barley plasma membrane 35.16 40.67
HORVU7Hr1G043470.2 Barley plasma membrane 41.94 40.62
KXG26481 Sorghum plasma membrane 43.87 40.48
CDX98821 Canola plasma membrane 40.97 40.45
TraesCS7D01G216400.1 Wheat plasma membrane 41.77 40.41
CDY02808 Canola plastid 27.26 40.14
CDY32713 Canola plasma membrane 42.1 40.09
CDX70172 Canola plasma membrane 40.32 40.06
TraesCS7A01G214300.1 Wheat plasma membrane 41.29 39.94
Zm00001d020403_P001 Maize plasma membrane 41.29 39.94
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 43.55 39.88
TraesCS7B01G121600.1 Wheat plasma membrane 41.13 39.78
EES15012 Sorghum plasma membrane 41.29 39.08
KXG35590 Sorghum plasma membrane 41.13 39.05
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 38.39 38.76
Os08t0427600-00 Rice golgi, plasma membrane 27.58 38.17
Zm00001d032244_P001 Maize plasma membrane 41.29 38.15
CDX71488 Canola plasma membrane 44.52 37.76
CDX94213 Canola plasma membrane 37.42 37.72
CDY44903 Canola plasma membrane 36.29 37.31
CDX81508 Canola plasma membrane 38.71 37.09
CDX84553 Canola plasma membrane 38.71 36.53
CDX79688 Canola plasma membrane 37.58 36.18
CDY38186 Canola plasma membrane 34.35 36.04
CDY47625 Canola plasma membrane 38.39 35.95
CDY34407 Canola mitochondrion 19.68 35.88
Zm00001d050355_P001 Maize plasma membrane 40.16 35.83
CDY25569 Canola mitochondrion 19.35 35.5
CDY08366 Canola plasma membrane 33.55 35.31
CDY54343 Canola plasma membrane 33.87 35.18
CDX87143 Canola plasma membrane 35.16 35.1
CDY19849 Canola plasma membrane 35.16 35.1
CDY47068 Canola plasma membrane 33.06 34.28
CDY22372 Canola cytosol 15.81 33.22
CDY34130 Canola cytosol, plastid 32.74 32.95
CDX71536 Canola cytosol 15.65 32.88
CDY19325 Canola plasma membrane 34.35 32.87
CDY35028 Canola mitochondrion 12.42 32.63
CDX97916 Canola plasma membrane 34.35 32.27
CDY24545 Canola plasma membrane 33.39 32.14
CDX81336 Canola plasma membrane 31.13 30.98
CDX67503 Canola cytosol, mitochondrion 19.03 30.73
CDX83117 Canola plasma membrane 31.61 29.92
CDX68581 Canola plasma membrane 31.13 29.56
CDY01430 Canola plasma membrane 32.26 29.24
CDX71537 Canola extracellular 11.94 25.96
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078IQ86UniProt:A0A078IQ86
EnsemblPlants:CDY51524ProteinID:CDY51524ProteinID:CDY51524.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00003626001InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069
PFAM:PF08263PFAM:PF13855PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_dom
SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE0B2CSEG:seg
Description
BnaA05g33240DBnaA05g33240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQ86]
Coordinates
chrLK033004:-:14332..16665
Molecular Weight (calculated)
66268.1 Da
IEP (calculated)
8.150
GRAVY (calculated)
-0.100
Length
620 amino acids
Sequence
(BLAST)
001: MKKCSLFVFF LFLAAVTSDL DSDRRALLLL RNSVRGRPLL WNTSASSPCA WHGVHCDSGR VTALRLPGAG LFGSLPLGGI GNLTQLQTLS LRFNSLSGPI
101: PSDFSNLALL RYLYLQGNAF SGEIPPFLFT LPSVIRINLG ENRFSGRIPD NVNNATRLVT LYLEKNQLTG SIPEITITLQ QFNVSSNQLN GSVPDSLSGF
201: PQSAFDGNTL CGKPLNPCEG DAETPNSPPV SPPPGKKDSD KLSAGAIAGI VIGCVAGLLL LLLILFCLCR KKKGEENGQP RNVEAPVAAA TSAAVHKESS
301: AANVPPAKAS GSGGGAVSKD LTFFVKSFGE FDLDGLLKAS AEVLGKGTVG SSYKASFEHG LVVAVKRLRD VVVPEKDFRE RMQVLGSMSH PNLVTLIAYY
401: FSPDEKLLVS EYMSRGSLSA LLHGNKGNGR APLNWETRAS IALGAARAIS YLHSRDSTTS HGNIKSSNIL LSNSYEAKVS DYGLAPIISS TSAPNRIDGY
501: RAPEVTDARK ISQKADVYSF GVLILELLTG KSPTHQQLTE EGVDLPRWVQ SITDQQSPSQ VFDPELAGHQ SEGNENMIRL LKIGISCTAQ YPDSRPSMAE
601: VTRLIEEVSH SSGSPNPVSG
Best Arabidopsis Sequence Match ( AT3G02880.1 )
(BLAST)
001: MKYKRKLSLS VVFLFVFYLA AVTSDLESDR RALLAVRNSV RGRPLLWNMS ASSPCNWHGV HCDAGRVTAL RLPGSGLFGS LPIGGIGNLT QLKTLSLRFN
101: SLSGPIPSDF SNLVLLRYLY LQGNAFSGEI PSLLFTLPSI IRINLGENKF SGRIPDNVNS ATRLVTLYLE RNQLSGPIPE ITLPLQQFNV SSNQLNGSIP
201: SSLSSWPRTA FEGNTLCGKP LDTCEAESPN GGDAGGPNTP PEKKDSDKLS AGAIVGIVIG CVVGLLLLLL ILFCLCRKRK KEENVPSRNV EAPVAAATSS
301: AAIPKETVVV VPPAKATGSE SGAVNKDLTF FVKSFGEFDL DGLLKASAEV LGKGTVGSSY KASFEHGLVV AVKRLRDVVV PEKEFRERLH VLGSMSHANL
401: VTLIAYYFSR DEKLLVFEYM SKGSLSAILH GNKGNGRTPL NWETRAGIAL GAARAISYLH SRDGTTSHGN IKSSNILLSD SYEAKVSDYG LAPIISSTSA
501: PNRIDGYRAP EITDARKISQ KADVYSFGVL ILELLTGKSP THQQLNEEGV DLPRWVQSVT EQQTPSDVLD PELTRYQPEG NENIIRLLKI GMSCTAQFPD
601: SRPSMAEVTR LIEEVSHSSG SPNPVSD
Arabidopsis Description
Probable inactive receptor kinase At3g02880 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.