Factsheet for Bra040609.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02880.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G02880.1	Bra018296.1-P	AT3G51920.1	17360592
AT3G02880.1	Bra033467.1-P	AT3G51920.1	17360592
AT3G02880.1	Bra002368.1-P	AT5G21274.1	17360592
AT3G02880.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51524	Canola	plasma membrane	99.2	99.68
Bra021408.1-P	Field mustard	plasma membrane	82.5	84.4
AT3G02880.1	Thale cress	plasma membrane	84.59	84.05
Bra023574.1-P	Field mustard	plasma membrane	76.4	77.65
Bra008611.1-P	Field mustard	plasma membrane	75.6	76.34
VIT_14s0006g01080.t01	Wine grape	plasma membrane	55.06	53.68
KRH17350	Soybean	extracellular	52.65	52.56
GSMUA_Achr8P23000_001	Banana	plasma membrane	46.07	51.99
GSMUA_Achr3P07440_001	Banana	plasma membrane	43.18	51.93
KRH72980	Soybean	extracellular	50.88	51.8
Solyc11g011020.1.1	Tomato	nucleus	53.29	51.71
PGSC0003DMT400040459	Potato	plasma membrane	52.81	50.85
Bra021277.1-P	Field mustard	plasma membrane	51.04	50.32
Os03t0712400-02	Rice	plasma membrane	18.14	50.22
GSMUA_Achr2P21610_001	Banana	plasma membrane	48.64	50.08
GSMUA_Achr9P15690_001	Banana	plasma membrane	44.94	50.0
GSMUA_Achr10P...	Banana	plasma membrane	46.07	49.83
GSMUA_Achr6P05910_001	Banana	extracellular, plasma membrane, vacuole	44.46	49.2
Bra014140.1-P	Field mustard	plasma membrane	50.08	48.9
GSMUA_Achr3P02160_001	Banana	plasma membrane	37.08	48.02
Bra022250.1-P	Field mustard	plasma membrane	48.64	48.02
GSMUA_Achr7P11160_001	Banana	plasma membrane	40.61	47.38
Zm00001d048053_P001	Maize	plasma membrane	49.6	46.19
Os03t0223000-02	Rice	plasma membrane	49.6	45.78
EER95247	Sorghum	plasma membrane	49.28	45.55
Zm00001d048054_P002	Maize	mitochondrion, plasma membrane	49.12	45.54
HORVU4Hr1G007550.1	Barley	plasma membrane	48.8	45.51
Bra033940.1-P	Field mustard	cytosol	21.83	45.18
TraesCS4D01G241100.1	Wheat	plasma membrane	48.64	45.02
TraesCS4D01G046900.1	Wheat	plasma membrane	48.48	45.01
Bra019271.1-P	Field mustard	cytosol	23.76	44.98
TraesCS4B01G047100.1	Wheat	plasma membrane	48.64	44.89
TraesCS4A01G064200.1	Wheat	plasma membrane	48.64	44.43
TraesCS4B01G241500.1	Wheat	plasma membrane	44.78	44.29
TraesCS4A01G267300.1	Wheat	plasma membrane	47.83	44.28
EER90996	Sorghum	plasma membrane	49.44	44.25
Zm00001d033745_P001	Maize	plasma membrane	48.8	43.8
Bra012045.1-P	Field mustard	plasma membrane	44.14	43.58
TraesCS5D01G210800.1	Wheat	plasma membrane	45.26	43.52
Bra034311.1-P	Field mustard	plasma membrane	45.1	42.77
TraesCS5B01G202900.1	Wheat	plasma membrane	44.78	42.73
Os09t0400500-01	Rice	plasma membrane	43.82	42.13
TraesCS5A01G205500.1	Wheat	plasma membrane	43.98	42.09
Os04t0463000-01	Rice	plasma membrane	44.78	41.7
Bra006774.1-P	Field mustard	plasma membrane	43.34	41.54
TraesCS2B01G344900.1	Wheat	plasma membrane	44.46	41.53
TraesCS2D01G325900.1	Wheat	plasma membrane	44.46	41.41
Bra040054.1-P	Field mustard	plasma membrane, plastid	42.38	41.38
TraesCS2A01G337000.1	Wheat	plasma membrane	44.14	41.11
Zm00001d013430_P001	Maize	mitochondrion	47.67	41.02
HORVU0Hr1G012920.2	Barley	cytosol	33.39	40.78
HORVU4Hr1G066900.1	Barley	plasma membrane	34.99	40.67
HORVU7Hr1G043470.2	Barley	plasma membrane	41.73	40.62
KXG26481	Sorghum	plasma membrane	43.66	40.48
TraesCS7D01G216400.1	Wheat	plasma membrane	41.57	40.41
Bra009091.1-P	Field mustard	plasma membrane	40.13	40.06
TraesCS7A01G214300.1	Wheat	plasma membrane	41.09	39.94
Zm00001d020403_P001	Maize	plasma membrane	41.09	39.94
Bra020377.1-P	Field mustard	plastid	26.97	39.91
Zm00001d003399_P001	Maize	mitochondrion, plasma membrane	43.34	39.88
TraesCS7B01G121600.1	Wheat	plasma membrane	40.93	39.78
EES15012	Sorghum	plasma membrane	41.09	39.08
KXG35590	Sorghum	plasma membrane	40.93	39.05
HORVU2Hr1G080770.4	Barley	mitochondrion, plasma membrane, plastid	38.2	38.76
Zm00001d032244_P001	Maize	plasma membrane	41.09	38.15
Os08t0427600-00	Rice	golgi, plasma membrane	27.29	37.95
Bra027751.1-P	Field mustard	plasma membrane	34.03	36.3
Bra027686.1-P	Field mustard	mitochondrion	19.74	36.07
Bra023075.1-P	Field mustard	plasma membrane	39.0	36.05
Zm00001d050355_P001	Maize	plasma membrane	39.97	35.83
Bra026468.1-P	Field mustard	plasma membrane	35.15	35.27
Bra029075.1-P	Field mustard	plasma membrane	33.39	34.78
Bra033656.1-P	Field mustard	cytosol	15.57	32.88
Bra019897.1-P	Field mustard	plasma membrane	34.19	32.18
Bra031492.1-P	Field mustard	plasma membrane	33.23	32.14
Bra028502.1-P	Field mustard	cytosol, mitochondrion	18.94	30.73
Bra012141.1-P	Field mustard	plasma membrane	31.94	29.09
Bra029997.1-P	Field mustard	plastid	20.22	25.77
Bra013728.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.2	25.45

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra040609	EnsemblPlants:Bra040609.1
EnsemblPlants:Bra040609.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4FHN1	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF19	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002547565	SEG:seg	:	:

Description

AT3G02880 (E=1e-243) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA05:-:23532728..23534756

Molecular Weight (calculated)

66469.3 Da

IEP (calculated)

8.150

GRAVY (calculated)

-0.098

Length

623 amino acids

Sequence
(BLAST)

001: MKKCSLFVFF LFLAAVTSDL DSDRRALLLL RNSVRGRPLL WNTSASSPCA WHGVHCDSGR VTALRLPGAG LFGSLPLGGI GNLTQLQTLS LRFNSLSGPI
101: PSDFSNLALL RYLYLQGNAF SGEIPPFLFT LPSVIRINLG ENRFSGRIPD NVNNATRLVT LYLEKNQLTG SIPEITITLQ QFNVSSNQLN GSVPDSLSGF
201: PQSAFDGNTL CGKPLNPCEG DAESPNSPPV SPPSGPAGKK DSDKLSAGAI AGIVIGCVAG LLLLLLILFC LCRKKKGEEN GQPRNVEAPV AAATSAAVHK
301: ESSAANVPPA KASGSGGGAV SKDLTFFVKS FGEFDLDGLL KASAEVLGKG TVGSSYKASF EHGLVVAVKR LRDVVVPEKD FRERMQVLGS MSHPNLVTLI
401: AYYFSPDEKL LVSEYMSRGS LSALLHGNKG NGRAPLNWET RASIALGAAR AISYLHSRDS TTSHGNIKSS NILLSNSYEA KVSDYGLAPI ISSTSAPNRI
501: DGYRAPEVTD ARKISQKADV YSFGVLILEL LTGKSPTHQQ LTEEGVDLPR WVQSITDQQS PSQVFDPELA GHQSEGNENM IRLLKIGISC TAQYPDSRPS
601: MAEVTRLIEE VSHSSGSPNP VSG

Best Arabidopsis Sequence Match ( AT3G02880.1 )
(BLAST)

001: MKYKRKLSLS VVFLFVFYLA AVTSDLESDR RALLAVRNSV RGRPLLWNMS ASSPCNWHGV HCDAGRVTAL RLPGSGLFGS LPIGGIGNLT QLKTLSLRFN
101: SLSGPIPSDF SNLVLLRYLY LQGNAFSGEI PSLLFTLPSI IRINLGENKF SGRIPDNVNS ATRLVTLYLE RNQLSGPIPE ITLPLQQFNV SSNQLNGSIP
201: SSLSSWPRTA FEGNTLCGKP LDTCEAESPN GGDAGGPNTP PEKKDSDKLS AGAIVGIVIG CVVGLLLLLL ILFCLCRKRK KEENVPSRNV EAPVAAATSS
301: AAIPKETVVV VPPAKATGSE SGAVNKDLTF FVKSFGEFDL DGLLKASAEV LGKGTVGSSY KASFEHGLVV AVKRLRDVVV PEKEFRERLH VLGSMSHANL
401: VTLIAYYFSR DEKLLVFEYM SKGSLSAILH GNKGNGRTPL NWETRAGIAL GAARAISYLH SRDGTTSHGN IKSSNILLSD SYEAKVSDYG LAPIISSTSA
501: PNRIDGYRAP EITDARKISQ KADVYSFGVL ILELLTGKSP THQQLNEEGV DLPRWVQSVT EQQTPSDVLD PELTRYQPEG NENIIRLLKI GMSCTAQFPD
601: SRPSMAEVTR LIEEVSHSSG SPNPVSD

Arabidopsis Description

Probable inactive receptor kinase At3g02880 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.