Factsheet for Bra021408.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02880.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G02880.1	Bra018296.1-P	AT3G51920.1	17360592
AT3G02880.1	Bra033467.1-P	AT3G51920.1	17360592
AT3G02880.1	Bra002368.1-P	AT5G21274.1	17360592
AT3G02880.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G02880.1	Thale cress	plasma membrane	85.06	82.62
Bra040609.1-P	Field mustard	plasma membrane	84.4	82.5
Bra023574.1-P	Field mustard	plasma membrane	77.01	76.51
Bra008611.1-P	Field mustard	plasma membrane	77.18	76.17
VIT_14s0006g01080.t01	Wine grape	plasma membrane	58.46	55.71
KRH17350	Soybean	extracellular	54.84	53.53
Solyc11g011020.1.1	Tomato	nucleus	55.34	52.49
KRH72980	Soybean	extracellular	52.38	52.12
PGSC0003DMT400040459	Potato	plasma membrane	54.84	51.62
Os03t0712400-02	Rice	plasma membrane	19.05	51.56
GSMUA_Achr3P07440_001	Banana	plasma membrane	43.84	51.54
GSMUA_Achr8P23000_001	Banana	plasma membrane	45.81	50.54
Bra021277.1-P	Field mustard	plasma membrane	52.22	50.32
GSMUA_Achr10P...	Banana	plasma membrane	47.13	49.83
GSMUA_Achr9P15690_001	Banana	plasma membrane	44.83	48.75
Bra014140.1-P	Field mustard	plasma membrane	51.07	48.75
GSMUA_Achr2P21610_001	Banana	plasma membrane	48.28	48.59
GSMUA_Achr6P05910_001	Banana	extracellular, plasma membrane, vacuole	44.83	48.49
Bra022250.1-P	Field mustard	plasma membrane	50.08	48.34
Bra033940.1-P	Field mustard	cytosol	23.48	47.51
GSMUA_Achr3P02160_001	Banana	plasma membrane	37.27	47.19
Zm00001d048053_P001	Maize	plasma membrane	51.72	47.09
GSMUA_Achr7P11160_001	Banana	plasma membrane	41.05	46.82
EER95247	Sorghum	plasma membrane	51.72	46.74
Os03t0223000-02	Rice	plasma membrane	51.72	46.67
Zm00001d048054_P002	Maize	mitochondrion, plasma membrane	51.23	46.43
Bra019271.1-P	Field mustard	cytosol	24.96	46.2
TraesCS4D01G241100.1	Wheat	plasma membrane	50.41	45.62
TraesCS4A01G064200.1	Wheat	plasma membrane	50.57	45.16
TraesCS4B01G241500.1	Wheat	plasma membrane	46.31	44.76
HORVU4Hr1G007550.1	Barley	plasma membrane	48.93	44.61
Bra012045.1-P	Field mustard	plasma membrane	46.14	44.53
TraesCS4D01G046900.1	Wheat	plasma membrane	48.93	44.41
Bra034311.1-P	Field mustard	plasma membrane	47.62	44.14
TraesCS4B01G047100.1	Wheat	plasma membrane	48.6	43.85
EER90996	Sorghum	plasma membrane	49.92	43.68
Zm00001d033745_P001	Maize	plasma membrane	49.59	43.52
TraesCS4A01G267300.1	Wheat	plasma membrane	47.62	43.09
Bra040054.1-P	Field mustard	plasma membrane, plastid	43.84	41.85
Os04t0463000-01	Rice	plasma membrane	45.81	41.7
Bra006774.1-P	Field mustard	plasma membrane	44.17	41.38
TraesCS5D01G210800.1	Wheat	plasma membrane	44.01	41.36
TraesCS5A01G205500.1	Wheat	plasma membrane	44.01	41.17
Bra020377.1-P	Field mustard	plastid	28.41	41.09
KXG26481	Sorghum	plasma membrane	45.32	41.07
TraesCS5B01G202900.1	Wheat	plasma membrane	44.01	41.04
HORVU4Hr1G066900.1	Barley	plasma membrane	35.96	40.86
Bra009091.1-P	Field mustard	plasma membrane	41.71	40.71
TraesCS2A01G337000.1	Wheat	plasma membrane	44.66	40.66
TraesCS2B01G344900.1	Wheat	plasma membrane	44.5	40.63
TraesCS2D01G325900.1	Wheat	plasma membrane	44.34	40.36
Zm00001d013430_P001	Maize	mitochondrion	47.78	40.19
Os09t0400500-01	Rice	plasma membrane	42.69	40.12
Zm00001d003399_P001	Maize	mitochondrion, plasma membrane	44.5	40.03
TraesCS7D01G216400.1	Wheat	plasma membrane	42.04	39.94
HORVU7Hr1G043470.2	Barley	plasma membrane	41.87	39.84
TraesCS7A01G214300.1	Wheat	plasma membrane	41.71	39.63
HORVU0Hr1G012920.2	Barley	cytosol	33.17	39.61
TraesCS7B01G121600.1	Wheat	plasma membrane	41.54	39.47
Zm00001d020403_P001	Maize	plasma membrane	41.05	39.0
EES15012	Sorghum	plasma membrane	41.38	38.47
HORVU2Hr1G080770.4	Barley	mitochondrion, plasma membrane, plastid	38.42	38.11
KXG35590	Sorghum	plasma membrane	40.23	37.52
Os08t0427600-00	Rice	golgi, plasma membrane	27.59	37.5
Bra027751.1-P	Field mustard	plasma membrane	35.47	36.99
Zm00001d032244_P001	Maize	plasma membrane	40.72	36.96
Bra027686.1-P	Field mustard	mitochondrion	20.2	36.07
Bra023075.1-P	Field mustard	plasma membrane	39.08	35.31
Bra026468.1-P	Field mustard	plasma membrane	35.96	35.27
Zm00001d050355_P001	Maize	plasma membrane	40.23	35.25
Bra029075.1-P	Field mustard	plasma membrane	33.83	34.45
Bra033656.1-P	Field mustard	cytosol	16.26	33.56
Bra031492.1-P	Field mustard	plasma membrane	34.65	32.76
Bra019897.1-P	Field mustard	plasma membrane	35.14	32.33
Bra028502.1-P	Field mustard	cytosol, mitochondrion	19.7	31.25
Bra012141.1-P	Field mustard	plasma membrane	33.17	29.53
Bra013728.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.39	26.31
Bra029997.1-P	Field mustard	plastid	21.02	26.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra021408	EnsemblPlants:Bra021408.1
EnsemblPlants:Bra021408.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4DY12	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF19	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002544AF8	SEG:seg	:	:

Description

AT3G02880 (E=5e-143) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA01:+:25314149..25316111

Molecular Weight (calculated)

65566.2 Da

IEP (calculated)

7.755

GRAVY (calculated)

-0.026

Length

609 amino acids

Sequence
(BLAST)

001: MNRSISFFSS IFLLYLAAVT SDLDSDRRAL LTLRSSVRGR TLLWNTTASS PCSWHGVNCL AGRVTSLRLP GTGSLGSLPN ESIGNLTQLQ TLSLRFNSLS
101: GPIPSDFSNL VLLRYLYLQG NAFSGEIPAF LFTLPNLIRI NLGENRFSGR IPGNVNSAPR LVTLYLERNQ LTGSIPEITL SLQQFNVSSN QLNGSIPDSL
201: SGFPVTVFEG NSLCGKPLQS CAVSPPSKDS DGLSTGAIVG IVIGCVVGLL LLLLVLFCLC RKRKTEENAP PRNVEAAPVA AAAATTSSTA AAIPKETAAA
301: AESGVVSKDL IFFVKSFGEF DLDGLLKASA EVLGKGSVGS SYKASFDHGL VVAVKRLRDV VVPEKDFRER MQVLGSMSHP NLVTLIAYYF SRDEKLLVFE
401: YMSRGSLSAL LHGNKGSGRT PLNWETRAGI ALGAARAISY LHSRDSTTSH GNIKSSNILL SNSYEAKVSD YGLAPIISST SAPNRIDGYR APEVTDARKI
501: SQKADVYSFG VLILELLTGK SPTHQQLNEE GVDLPRWVQS VTDQQSTSDV FDPELTRYES EGNENIIRLL KIGMSCTAQY PDSRPSMADV TRLIEEVSHS
601: SGSPNPVSD

Best Arabidopsis Sequence Match ( AT3G02880.1 )
(BLAST)

001: MKYKRKLSLS VVFLFVFYLA AVTSDLESDR RALLAVRNSV RGRPLLWNMS ASSPCNWHGV HCDAGRVTAL RLPGSGLFGS LPIGGIGNLT QLKTLSLRFN
101: SLSGPIPSDF SNLVLLRYLY LQGNAFSGEI PSLLFTLPSI IRINLGENKF SGRIPDNVNS ATRLVTLYLE RNQLSGPIPE ITLPLQQFNV SSNQLNGSIP
201: SSLSSWPRTA FEGNTLCGKP LDTCEAESPN GGDAGGPNTP PEKKDSDKLS AGAIVGIVIG CVVGLLLLLL ILFCLCRKRK KEENVPSRNV EAPVAAATSS
301: AAIPKETVVV VPPAKATGSE SGAVNKDLTF FVKSFGEFDL DGLLKASAEV LGKGTVGSSY KASFEHGLVV AVKRLRDVVV PEKEFRERLH VLGSMSHANL
401: VTLIAYYFSR DEKLLVFEYM SKGSLSAILH GNKGNGRTPL NWETRAGIAL GAARAISYLH SRDGTTSHGN IKSSNILLSD SYEAKVSDYG LAPIISSTSA
501: PNRIDGYRAP EITDARKISQ KADVYSFGVL ILELLTGKSP THQQLNEEGV DLPRWVQSVT EQQTPSDVLD PELTRYQPEG NENIIRLLKI GMSCTAQFPD
601: SRPSMAEVTR LIEEVSHSSG SPNPVSD

Arabidopsis Description

Probable inactive receptor kinase At3g02880 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.