Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004015_P001
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d012031_P001
Zm00001d013059_P003
Zm00001d023376_P002
Zm00001d028948_P001
Zm00001d034492_P006
Zm00001d037340_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d042341_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d051793_P001
Zm00001d052415_P001
Zm00001d052493_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G02880.1 Zm00001d005003_P002 AT2G41090.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d005003_P002 AT5G21274.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT5G21274.1 17360592
AT3G17840.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d013059_P003 AT3G51310.1 15618630
AT3G17840.1 Zm00001d034492_P006 AT3G51310.1 15618630
AT3G17840.1 Zm00001d023376_P002 AT5G19140.1 15618630
AT3G17840.1 Zm00001d052493_P001 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG26481 Sorghum plasma membrane 90.99 91.67
TraesCS2B01G344900.1 Wheat plasma membrane 79.76 80.96
TraesCS2D01G325900.1 Wheat plasma membrane 79.91 80.87
TraesCS2A01G337000.1 Wheat plasma membrane 79.76 80.72
Os04t0463000-01 Rice plasma membrane 79.32 80.27
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 66.62 73.45
PGSC0003DMT400036789 Potato cytosol 27.47 57.94
GSMUA_Achr10P... Banana plasma membrane 44.02 51.74
GSMUA_Achr3P02160_001 Banana plasma membrane 35.89 50.52
GSMUA_Achr2P21610_001 Banana plasma membrane 44.31 49.59
VIT_14s0006g01080.t01 Wine grape plasma membrane 46.68 49.45
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 41.06 49.38
Zm00001d048053_P001 Maize plasma membrane 48.45 49.03
CDX95816 Canola plasma membrane 42.54 48.81
CDX92167 Canola plasma membrane 44.9 48.72
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 48.15 48.51
KRH41871 Soybean endoplasmic reticulum 46.38 48.38
CDY67567 Canola plasma membrane 41.51 48.2
CDY61284 Canola plasma membrane 44.9 48.1
Bra021277.1-P Field mustard plasma membrane 44.9 48.1
KRH60559 Soybean endoplasmic reticulum 46.53 48.02
Bra022250.1-P Field mustard plasma membrane 44.31 47.54
Solyc06g068910.2.1 Tomato plasma membrane 44.31 47.32
AT3G17840.1 Thale cress plasma membrane 45.05 47.14
GSMUA_Achr7P11160_001 Banana plasma membrane 37.08 47.0
VIT_17s0000g02010.t01 Wine grape plasma membrane 46.53 46.88
PGSC0003DMT400074103 Potato plasma membrane 44.31 46.3
Zm00001d033745_P001 Maize plasma membrane 47.42 46.25
Bra014140.1-P Field mustard plasma membrane 43.57 46.24
CDX77309 Canola plasma membrane 43.87 45.98
AT1G48480.1 Thale cress plasma membrane 44.46 45.95
Solyc11g011020.1.1 Tomato nucleus 43.57 45.95
CDY41827 Canola plasma membrane 43.87 45.9
Solyc03g118510.2.1 Tomato nucleus 44.61 45.69
PGSC0003DMT400040459 Potato plasma membrane 43.57 45.6
KRH17350 Soybean extracellular 41.95 45.51
KRH48661 Soybean nucleus 45.49 45.03
Bra021408.1-P Field mustard plasma membrane 40.03 44.5
KRH72980 Soybean extracellular 40.03 44.28
CDX85498 Canola plasma membrane 40.03 44.21
Bra023574.1-P Field mustard plasma membrane 40.03 44.21
Bra008611.1-P Field mustard plasma membrane 40.18 44.08
CDY38103 Canola plasma membrane 39.73 43.88
CDX69441 Canola plasma membrane 40.03 43.85
Zm00001d038487_P003 Maize plasma membrane 41.06 43.85
CDY28719 Canola plasma membrane 39.0 43.71
Zm00001d020403_P001 Maize plasma membrane 41.36 43.68
AT5G16590.1 Thale cress plasma membrane 40.33 43.68
KRH39040 Soybean plasma membrane 42.1 43.58
CDY51524 Canola plasma membrane 39.88 43.55
CDY49655 Canola plasma membrane 39.59 43.44
Bra040609.1-P Field mustard plasma membrane 39.88 43.34
Zm00001d013430_P001 Maize mitochondrion 46.23 43.23
AT3G02880.1 Thale cress plasma membrane 39.73 42.9
Zm00001d039188_P001 Maize plasma membrane 41.06 42.51
Zm00001d011312_P001 Maize mitochondrion, plasma membrane 42.25 41.69
Zm00001d044434_P001 Maize plasma membrane 42.25 41.03
Zm00001d022432_P001 Maize plasma membrane 38.4 40.88
Zm00001d012514_P001 Maize extracellular 37.81 40.7
Zm00001d032244_P001 Maize plasma membrane 39.14 39.49
Zm00001d043071_P001 Maize plasma membrane 38.7 39.1
Zm00001d050355_P001 Maize plasma membrane 40.03 38.99
Zm00001d039325_P001 Maize plasma membrane 37.67 38.81
Zm00001d008965_P001 Maize plasma membrane 38.11 38.39
Zm00001d039967_P001 Maize plasma membrane 36.34 37.1
Zm00001d029040_P001 Maize mitochondrion 37.81 35.56
Zm00001d004929_P001 Maize mitochondrion 36.48 32.2
Zm00001d011707_P001 Maize plasma membrane 30.72 31.95
Zm00001d002068_P001 Maize plasma membrane 30.72 29.67
Zm00001d018541_P002 Maize plasma membrane 30.28 25.88
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1D6E928GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfProteinID:ONM16898.1PFAM:PF00069
PFAM:PF08263ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF45InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000220F7A6
EnsemblPlantsGene:Zm00001d003399EnsemblPlants:Zm00001d003399_P001EnsemblPlants:Zm00001d003399_T001SEG:seg::
Description
Probable inactive receptor kinase
Coordinates
chr2:+:43038974..43041805
Molecular Weight (calculated)
71481.2 Da
IEP (calculated)
9.328
GRAVY (calculated)
-0.053
Length
677 amino acids
Sequence
(BLAST)
001: MLPPRAAAVP LLLLALAAGA ARGADDLASD AVALQAFLAP FGSATVSWNS SQPTCSWTGV VCTGGRVTEI HLPGEGLRGA LPVGALGGLN KLAVLSLRYN
101: ALSGPLPRDL ASCVELRVIN LQSNLLSGEL PVEVLALPAL TQLNLAQNRL SGRISPAIAK NGRLQLLFLN GNRLTGELPN VSMPSLTALN VSFNNLSGEI
201: PKSFGGMPST SFLGMPLCGK PLPPCRAPGS EASPSQPPTP TLRPEAPAPT DNRGRGRHHL AGGAIAGIVV GCAFGFLLIA AVLVLVCGAL RREPRPTYRS
301: RDAVAAELAL HSKEAMSPNG YTPRVSDARP PPPPSVPPPP AVSAAAVGRK KLFFFGRIPR PYDLEDLLRA SAEVLGKGTH GTTYKAAIES GPVMAVKRLK
401: ETSLPEREFR DKVAAIGGID HPNVVPLQAY YFSKDEKLMV YEFVAMGSLS SMLHGNRGSG RSPLSWESRR RIALASARGL EYIHATGSMV THGNIKSSNI
501: LLSRTVDARV ADHGLAHLVN PAGAATTTRV AGYRAPEVVA DPRRASQKAD AYSFGVLLLE LLTGKAPAHA VLHDEGVDLP RWARSVVKEE WTSEVFDTEL
601: LRHPGAEDEM VEMLRLAMDC TEPAPDQRPA MPEIVARIEG LGGTASTSTA TARSGRSASV DEADDRPLRT TGSIRQS
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.