Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400046278 | Potato | cytosol | 38.58 | 98.7 |
Zm00001d008278_P001 | Maize | cytosol | 62.94 | 97.64 |
Bra025438.1-P | Field mustard | cytosol | 55.33 | 96.46 |
PGSC0003DMT400054299 | Potato | cytosol | 55.33 | 96.46 |
KRH18664 | Soybean | cytosol | 63.45 | 89.29 |
VIT_08s0040g00470.t01 | Wine grape | cytosol | 66.5 | 87.92 |
Solyc10g081170.1.1 | Tomato | extracellular | 66.5 | 87.92 |
KRG94975 | Soybean | nucleus | 66.5 | 87.92 |
Solyc11g072240.1.1 | Tomato | cytosol | 65.99 | 87.25 |
Solyc12g099990.1.1 | Tomato | nucleus | 65.99 | 87.25 |
PGSC0003DMT400018569 | Potato | cytosol | 65.99 | 87.25 |
Bra020155.1-P | Field mustard | cytosol | 65.99 | 87.25 |
Bra014671.1-P | Field mustard | cytosol | 65.99 | 87.25 |
Bra006595.1-P | Field mustard | cytosol | 65.99 | 87.25 |
Bra003251.1-P | Field mustard | cytosol | 65.99 | 87.25 |
Solyc10g077010.1.1 | Tomato | cytosol | 65.99 | 87.25 |
Bra002368.1-P | Field mustard | cytosol | 65.99 | 87.25 |
Bra000214.1-P | Field mustard | cytosol | 65.99 | 87.25 |
PGSC0003DMT400058435 | Potato | cytosol | 65.99 | 87.25 |
AT5G21274.1 | Thale cress | cytosol | 65.99 | 87.25 |
AT3G56800.1 | Thale cress | cytosol | 65.99 | 87.25 |
PGSC0003DMT400070437 | Potato | cytosol | 65.99 | 87.25 |
Solyc01g008950.2.1 | Tomato | nucleus | 65.99 | 87.25 |
Bra007269.1-P | Field mustard | cytosol | 65.48 | 86.58 |
CDY56411 | Canola | cytosol | 65.48 | 86.58 |
CDY04474 | Canola | cytosol | 65.48 | 86.58 |
CDY65072 | Canola | cytosol | 65.48 | 86.58 |
Bra019453.1-P | Field mustard | cytosol | 65.48 | 86.58 |
Bra012037.1-P | Field mustard | cytosol | 65.48 | 86.58 |
CDY55678 | Canola | cytosol | 64.97 | 85.91 |
VIT_06s0009g01910.t01 | Wine grape | cytosol | 66.5 | 85.62 |
PGSC0003DMT400014123 | Potato | mitochondrion | 52.79 | 85.25 |
CDX99690 | Canola | cytosol | 64.47 | 85.23 |
Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 64.47 | 85.23 |
Bra004166.1-P | Field mustard | cytosol | 64.47 | 85.23 |
CDX96148 | Canola | cytosol | 64.47 | 85.23 |
CDX92401 | Canola | cytosol | 57.87 | 85.07 |
Zm00001d047597_P001 | Maize | cytosol | 63.45 | 85.03 |
CDY12321 | Canola | cytosol | 62.44 | 84.83 |
Bra034981.1-P | Field mustard | cytosol | 62.44 | 84.83 |
CDY27651 | Canola | cytosol | 63.96 | 84.0 |
CDX75970 | Canola | cytosol | 47.21 | 81.58 |
AT2G41110.2 | Thale cress | cytosol | 66.5 | 81.37 |
AT1G66410.2 | Thale cress | cytosol | 65.48 | 81.13 |
Zm00001d038543_P004 | Maize | plastid | 65.99 | 76.92 |
TraesCS2B01G113800.2 | Wheat | cytosol | 66.5 | 74.86 |
AT5G37780.3 | Thale cress | cytosol | 65.99 | 74.29 |
PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 64.47 | 73.41 |
Bra034317.1-P | Field mustard | cytosol | 66.5 | 73.18 |
CDY48191 | Canola | cytosol | 66.5 | 73.18 |
CDX77060 | Canola | cytosol | 66.5 | 72.78 |
AT2G27030.3 | Thale cress | cytosol | 65.99 | 71.82 |
KRG89812 | Soybean | cytosol, mitochondrion | 59.39 | 70.91 |
CDY57144 | Canola | cytosol | 49.75 | 67.12 |
CDY30947 | Canola | cytosol | 64.97 | 61.24 |
HORVU2Hr1G016740.4 | Barley | cytosol | 66.5 | 60.93 |
AT3G43810.2 | Thale cress | cytosol | 65.99 | 60.75 |
Zm00001d043144_P001 | Maize | plasma membrane | 55.33 | 59.56 |
Zm00001d052415_P001 | Maize | cytosol | 47.72 | 59.49 |
CDY21220 | Canola | cytosol | 64.47 | 57.47 |
Zm00001d041430_P001 | Maize | cytosol | 47.21 | 55.03 |
Zm00001d033980_P001 | Maize | cytosol | 41.62 | 52.23 |
Zm00001d005003_P002 | Maize | cytosol | 47.72 | 52.22 |
AT2G41090.1 | Thale cress | cytosol | 42.13 | 43.46 |
Zm00001d035095_P001 | Maize | cytosol, extracellular, mitochondrion | 32.49 | 43.24 |
Zm00001d049665_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 31.98 | 42.57 |
Zm00001d010649_P001 | Maize | extracellular | 30.46 | 42.25 |
Zm00001d053188_P001 | Maize | cytosol | 21.32 | 38.53 |
Zm00001d014271_P001 | Maize | cytosol | 34.01 | 37.43 |
Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 30.96 | 35.47 |
Zm00001d039110_P001 | Maize | cytosol | 29.44 | 33.72 |
Zm00001d044411_P001 | Maize | plastid | 28.43 | 23.93 |
AT2G41100.1 | Thale cress | cytosol | 38.58 | 23.46 |
Protein Annotations
EnsemblPlants:Zm00001d028948_P001 | EnsemblPlants:Zm00001d028948_T001 | EnsemblPlantsGene:Zm00001d028948 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
PANTHER:PTHR23050:SF250 | PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | ProteinID:ONL97467.1 | ScanProsite:PS00018 |
SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0008432C06 | UniProt:A0A1D6K120 | MapMan:35.1 | : |
Description
calmodulin3Calmodulin-7
Coordinates
chr1:+:52518690..52523101
Molecular Weight (calculated)
21991.2 Da
IEP (calculated)
4.379
GRAVY (calculated)
-0.429
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAATLLTLA GQKRQSGKPA FEANICAIVE YVLPPYKTSG WALVRATRCG RSPQAQDLRE TIDLKLLPAV HRTGCITTKE LGTVMRSLGQ NPTEAELQDM
101: INEVDADGNG TIDFPEFLNL MARKMKDTDS EEELKEAFRV FDKDQNGFIS AAELRHVMTN LGEKLTDEEV DEMIREADVD GDGQINYEEF VKVMMAK
101: INEVDADGNG TIDFPEFLNL MARKMKDTDS EEELKEAFRV FDKDQNGFIS AAELRHVMTN LGEKLTDEEV DEMIREADVD GDGQINYEEF VKVMMAK
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.